Result of FASTA (omim) for
pFN21AB5921
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5921, 505 aa
1>>>pF1KB5921 505 - 505 aa - 505 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.5473+/-0.000404; mu= 0.6136+/- 0.025
mean_var=312.0453+/-63.795, 0's: 0 Z-trim(121.6): 246 B-trim: 87 in 1/54
Lambda= 0.072605
statistics sampled from 38093 (38392) to 38093 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.771), E-opt: 0.2 (0.45), width: 16
Scan time: 11.830
The best scores are: opt bits E(85289)
NP_852124 (OMIM: 122880,148820,193500,268220,60659 ( 505) 3435 373.5 8.2e-103
NP_852123 (OMIM: 122880,148820,193500,268220,60659 ( 484) 3294 358.7 2.2e-98
NP_001120838 (OMIM: 122880,148820,193500,268220,60 ( 483) 3275 356.7 8.8e-98
NP_852122 (OMIM: 122880,148820,193500,268220,60659 ( 479) 3224 351.3 3.6e-96
NP_852126 (OMIM: 122880,148820,193500,268220,60659 ( 403) 2658 292.0 2.2e-78
NP_852125 (OMIM: 122880,148820,193500,268220,60659 ( 407) 2658 292.0 2.2e-78
NP_001128726 (OMIM: 167410,268220) paired box prot ( 505) 2515 277.1 8.4e-74
NP_039236 (OMIM: 167410,268220) paired box protein ( 518) 2511 276.7 1.1e-73
NP_002575 (OMIM: 167410,268220) paired box protein ( 520) 2497 275.2 3.2e-73
NP_039230 (OMIM: 122880,148820,193500,268220,60659 ( 206) 1321 151.6 2e-36
NP_000429 (OMIM: 122880,148820,193500,268220,60659 ( 215) 1316 151.1 3e-36
NP_001244025 (OMIM: 167411,615560) paired box prot ( 457) 684 85.3 4.3e-16
NP_057953 (OMIM: 167414,615545) paired box protein ( 391) 682 85.0 4.4e-16
NP_006183 (OMIM: 167411,615560) paired box protein ( 534) 684 85.3 4.7e-16
NP_001267477 (OMIM: 167414,615545) paired box prot ( 362) 669 83.6 1.1e-15
NP_001267482 (OMIM: 167414,615545) paired box prot ( 319) 666 83.2 1.2e-15
NP_001267479 (OMIM: 167414,615545) paired box prot ( 295) 665 83.1 1.2e-15
XP_011510093 (OMIM: 167415,218700) PREDICTED: pair ( 500) 670 83.8 1.3e-15
NP_001267483 (OMIM: 167414,615545) paired box prot ( 348) 666 83.3 1.3e-15
NP_003457 (OMIM: 167415,218700) paired box protein ( 450) 668 83.6 1.3e-15
XP_005251538 (OMIM: 167414,615545) PREDICTED: pair ( 390) 665 83.2 1.5e-15
XP_011516198 (OMIM: 167414,615545) PREDICTED: pair ( 410) 664 83.1 1.7e-15
NP_001267478 (OMIM: 167414,615545) paired box prot ( 324) 660 82.6 1.9e-15
NP_001267481 (OMIM: 167414,615545) paired box prot ( 328) 660 82.6 1.9e-15
NP_001267476 (OMIM: 167414,615545) paired box prot ( 357) 660 82.6 2e-15
XP_011510092 (OMIM: 167415,218700) PREDICTED: pair ( 507) 660 82.8 2.6e-15
NP_003978 (OMIM: 120330,167409,191830,616002) pair ( 417) 656 82.3 3e-15
NP_003981 (OMIM: 120330,167409,191830,616002) pair ( 432) 656 82.3 3.1e-15
NP_000269 (OMIM: 120330,167409,191830,616002) pair ( 394) 655 82.2 3.2e-15
NP_003979 (OMIM: 120330,167409,191830,616002) pair ( 396) 655 82.2 3.2e-15
XP_016871774 (OMIM: 120330,167409,191830,616002) P ( 448) 656 82.3 3.2e-15
NP_003980 (OMIM: 120330,167409,191830,616002) pair ( 409) 655 82.2 3.2e-15
XP_016871773 (OMIM: 120330,167409,191830,616002) P ( 463) 656 82.3 3.3e-15
NP_001291498 (OMIM: 120330,167409,191830,616002) p ( 425) 655 82.2 3.3e-15
XP_016871776 (OMIM: 120330,167409,191830,616002) P ( 427) 655 82.2 3.3e-15
XP_016871775 (OMIM: 120330,167409,191830,616002) P ( 440) 655 82.2 3.4e-15
XP_016871778 (OMIM: 120330,167409,191830,616002) P ( 374) 649 81.5 4.7e-15
NP_006185 (OMIM: 167416,604625) paired box protein ( 341) 648 81.4 4.7e-15
XP_016871771 (OMIM: 120330,167409,191830,616002) P ( 483) 649 81.6 5.6e-15
XP_016871772 (OMIM: 120330,167409,191830,616002) P ( 483) 649 81.6 5.6e-15
XP_016871770 (OMIM: 120330,167409,191830,616002) P ( 496) 649 81.6 5.7e-15
XP_011516199 (OMIM: 167414,615545) PREDICTED: pair ( 409) 647 81.3 5.8e-15
XP_016871777 (OMIM: 120330,167409,191830,616002) P ( 424) 643 80.9 7.9e-15
NP_054698 (OMIM: 167415,218700) paired box protein ( 287) 636 80.0 1e-14
NP_039247 (OMIM: 167415,218700) paired box protein ( 321) 636 80.1 1.1e-14
NP_039246 (OMIM: 167415,218700) paired box protein ( 398) 638 80.4 1.1e-14
XP_016860368 (OMIM: 167415,218700) PREDICTED: pair ( 402) 638 80.4 1.1e-14
XP_011510096 (OMIM: 167415,218700) PREDICTED: pair ( 387) 636 80.2 1.2e-14
XP_011510094 (OMIM: 167415,218700) PREDICTED: pair ( 455) 637 80.3 1.3e-14
XP_016860367 (OMIM: 167415,218700) PREDICTED: pair ( 459) 637 80.3 1.3e-14
>>NP_852124 (OMIM: 122880,148820,193500,268220,606597) p (505 aa)
initn: 3435 init1: 3435 opt: 3435 Z-score: 1966.8 bits: 373.5 E(85289): 8.2e-103
Smith-Waterman score: 3435; 100.0% identity (100.0% similar) in 505 aa overlap (1-505:1-505)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
430 440 450 460 470 480
490 500
pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ
:::::::::::::::::::::::::
NP_852 PDIAWFQILLNTFDKSSGEEEDLEQ
490 500
>>NP_852123 (OMIM: 122880,148820,193500,268220,606597) p (484 aa)
initn: 3294 init1: 3294 opt: 3294 Z-score: 1887.2 bits: 358.7 E(85289): 2.2e-98
Smith-Waterman score: 3294; 100.0% identity (100.0% similar) in 484 aa overlap (1-484:1-484)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
430 440 450 460 470 480
490 500
pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ
::::
NP_852 PDIA
>>NP_001120838 (OMIM: 122880,148820,193500,268220,606597 (483 aa)
initn: 2544 init1: 2544 opt: 3275 Z-score: 1876.4 bits: 356.7 E(85289): 8.8e-98
Smith-Waterman score: 3275; 99.8% identity (99.8% similar) in 484 aa overlap (1-484:1-483)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
NP_001 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPK-VTTPDVEKKIEE
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
420 430 440 450 460 470
490 500
pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ
::::
NP_001 PDIA
480
>>NP_852122 (OMIM: 122880,148820,193500,268220,606597) p (479 aa)
initn: 3224 init1: 3224 opt: 3224 Z-score: 1847.6 bits: 351.3 E(85289): 3.6e-96
Smith-Waterman score: 3224; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
430 440 450 460 470
490 500
pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ
>>NP_852126 (OMIM: 122880,148820,193500,268220,606597) p (403 aa)
initn: 2657 init1: 2657 opt: 2658 Z-score: 1528.1 bits: 292.0 E(85289): 2.2e-78
Smith-Waterman score: 2658; 98.2% identity (99.5% similar) in 399 aa overlap (1-399:1-399)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
:::::::::::::::::::::::::::::::: .....
NP_852 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVPFIISSQISRK
370 380 390 400
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
>>NP_852125 (OMIM: 122880,148820,193500,268220,606597) p (407 aa)
initn: 2657 init1: 2657 opt: 2658 Z-score: 1528.1 bits: 292.0 E(85289): 2.2e-78
Smith-Waterman score: 2658; 98.2% identity (99.5% similar) in 399 aa overlap (1-399:1-399)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_852 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
:::::::::::::::::::::::::::::::: .....
NP_852 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVPFIISSQISLGFKSF
370 380 390 400
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
>>NP_001128726 (OMIM: 167410,268220) paired box protein (505 aa)
initn: 2344 init1: 1050 opt: 2515 Z-score: 1446.0 bits: 277.1 E(85289): 8.4e-74
Smith-Waterman score: 2515; 76.3% identity (89.8% similar) in 490 aa overlap (1-484:1-478)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
NP_001 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
NP_001 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPS--VSSISRILRSKFGKGEEE-EADLERKEA
:::::::::::::::.::::. :::.:::: ::::::.:: :::: ::: ::: :.
NP_001 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEAD---KKE
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 EESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERA
...::::::::::::..... . :::::..:::::::::::::::::::::::::::.:
NP_001 DDGEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT
::::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::
NP_001 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAY
.::::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
NP_001 GMPTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSP
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...::
NP_001 ---GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISP
360 370 380 390 400
420 430 440 450 460 470
pF1KB5 LTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQS
: :::. .:..::::::: : .: :::::::.::::::::::::.:::.:::::::::.
NP_001 LHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQT
410 420 430 440 450 460
480 490 500
pF1KB5 AFHYLKPDIAWFQILLNTFDKSSGEEEDLEQ
: :: ...
NP_001 AVDYLAKNVSLSTQRRMKLGEHSAVLGLLPVETGQAY
470 480 490 500
>>NP_039236 (OMIM: 167410,268220) paired box protein Pax (518 aa)
initn: 1919 init1: 1079 opt: 2511 Z-score: 1443.6 bits: 276.7 E(85289): 1.1e-73
Smith-Waterman score: 2511; 77.8% identity (90.8% similar) in 478 aa overlap (1-474:1-466)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
NP_039 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
NP_039 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE-EADLERKEAEE
:::::::::::::::.::::. :::.::::::::::.:: :::: ::: ::: :. ..
NP_039 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEEEDEAD---KKEDD
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 SEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFE
.::::::::::::..... . :::::..:::::::::::::::::::::::::::.:::
NP_039 GEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAM
::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::.:
NP_039 RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAYCL
:::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
NP_039 PTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY--
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 PSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLT
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...:::
NP_039 -GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISPLH
360 370 380 390 400
420 430 440 450 460 470
pF1KB5 GGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAF
:::. .:..::::::: : .: :::::::.::::::::::::.:::.::::::::::
NP_039 GGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQSEC
410 420 430 440 450 460
480 490 500
pF1KB5 HYLKPDIAWFQILLNTFDKSSGEEEDLEQ
NP_039 LVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT
470 480 490 500 510
>>NP_002575 (OMIM: 167410,268220) paired box protein Pax (520 aa)
initn: 1884 init1: 1050 opt: 2497 Z-score: 1435.6 bits: 275.2 E(85289): 3.2e-73
Smith-Waterman score: 2497; 77.5% identity (90.4% similar) in 480 aa overlap (1-474:1-468)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
NP_002 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
NP_002 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPS--VSSISRILRSKFGKGEEE-EADLERKEA
:::::::::::::::.::::. :::.:::: ::::::.:: :::: ::: ::: :.
NP_002 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEAD---KKE
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 EESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERA
...::::::::::::..... . :::::..:::::::::::::::::::::::::::.:
NP_002 DDGEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT
::::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::
NP_002 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAY
.::::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
NP_002 GMPTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSP
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...::
NP_002 ---GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISP
360 370 380 390 400
420 430 440 450 460 470
pF1KB5 LTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQS
: :::. .:..::::::: : .: :::::::.::::::::::::.:::.::::::::::
NP_002 LHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQS
410 420 430 440 450 460
480 490 500
pF1KB5 AFHYLKPDIAWFQILLNTFDKSSGEEEDLEQ
NP_002 ECLVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT
470 480 490 500 510 520
>>NP_039230 (OMIM: 122880,148820,193500,268220,606597) p (206 aa)
initn: 1321 init1: 1321 opt: 1321 Z-score: 774.9 bits: 151.6 E(85289): 2e-36
Smith-Waterman score: 1321; 99.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_039 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_039 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_039 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
:::::::::::::::..:
NP_039 EKKAKHSIDGILSERGKALVSGVSSH
190 200
505 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:38:28 2016 done: Sun Nov 6 04:38:30 2016
Total Scan time: 11.830 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]