Result of FASTA (ccds) for
pFN21AB5921
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5921, 505 aa
1>>>pF1KB5921 505 - 505 aa - 505 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0133+/-0.000934; mu= 3.2314+/- 0.057
mean_var=266.3111+/-54.809, 0's: 0 Z-trim(113.6): 177 B-trim: 7 in 1/52
Lambda= 0.078592
statistics sampled from 14073 (14263) to 14073 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.438), width: 16
Scan time: 3.810
The best scores are: opt bits E(32554)
CCDS2448.1 PAX3 gene_id:5077|Hs108|chr2 ( 505) 3435 402.7 4.8e-112
CCDS42825.1 PAX3 gene_id:5077|Hs108|chr2 ( 484) 3294 386.7 3.1e-107
CCDS46522.1 PAX3 gene_id:5077|Hs108|chr2 ( 483) 3275 384.6 1.4e-106
CCDS42826.1 PAX3 gene_id:5077|Hs108|chr2 ( 479) 3224 378.8 7.4e-105
CCDS2450.1 PAX3 gene_id:5077|Hs108|chr2 ( 403) 2658 314.5 1.4e-85
CCDS2449.1 PAX3 gene_id:5077|Hs108|chr2 ( 407) 2658 314.5 1.4e-85
CCDS44074.1 PAX7 gene_id:5081|Hs108|chr1 ( 505) 2515 298.4 1.2e-80
CCDS44075.1 PAX7 gene_id:5081|Hs108|chr1 ( 518) 2511 298.0 1.7e-80
CCDS186.1 PAX7 gene_id:5081|Hs108|chr1 ( 520) 2497 296.4 5.1e-80
CCDS2451.1 PAX3 gene_id:5077|Hs108|chr2 ( 206) 1321 162.7 3.7e-40
CCDS46523.1 PAX3 gene_id:5077|Hs108|chr2 ( 215) 1316 162.1 5.6e-40
CCDS74709.1 PAX1 gene_id:5075|Hs108|chr20 ( 457) 684 90.8 3.6e-18
CCDS6607.1 PAX5 gene_id:5079|Hs108|chr9 ( 391) 682 90.5 3.7e-18
CCDS13146.2 PAX1 gene_id:5075|Hs108|chr20 ( 534) 684 90.8 4e-18
CCDS65048.1 PAX5 gene_id:5079|Hs108|chr9 ( 362) 669 89.0 9.8e-18
CCDS65042.1 PAX5 gene_id:5079|Hs108|chr9 ( 319) 666 88.6 1.1e-17
CCDS65044.1 PAX5 gene_id:5079|Hs108|chr9 ( 295) 665 88.4 1.2e-17
CCDS65043.1 PAX5 gene_id:5079|Hs108|chr9 ( 348) 666 88.6 1.2e-17
CCDS46398.1 PAX8 gene_id:7849|Hs108|chr2 ( 450) 668 88.9 1.2e-17
CCDS65045.1 PAX5 gene_id:5079|Hs108|chr9 ( 324) 660 87.9 1.8e-17
CCDS65046.1 PAX5 gene_id:5079|Hs108|chr9 ( 328) 660 87.9 1.9e-17
CCDS65047.1 PAX5 gene_id:5079|Hs108|chr9 ( 357) 660 87.9 2e-17
CCDS41561.1 PAX2 gene_id:5076|Hs108|chr10 ( 394) 655 87.4 3.1e-17
CCDS7499.1 PAX2 gene_id:5076|Hs108|chr10 ( 396) 655 87.4 3.1e-17
CCDS9662.1 PAX9 gene_id:5083|Hs108|chr14 ( 341) 648 86.6 4.9e-17
CCDS42735.1 PAX8 gene_id:7849|Hs108|chr2 ( 287) 636 85.1 1.1e-16
CCDS46399.1 PAX8 gene_id:7849|Hs108|chr2 ( 398) 638 85.5 1.2e-16
CCDS42736.1 PAX8 gene_id:7849|Hs108|chr2 ( 321) 636 85.2 1.2e-16
CCDS31451.1 PAX6 gene_id:5080|Hs108|chr11 ( 422) 607 82.0 1.4e-15
>>CCDS2448.1 PAX3 gene_id:5077|Hs108|chr2 (505 aa)
initn: 3435 init1: 3435 opt: 3435 Z-score: 2125.0 bits: 402.7 E(32554): 4.8e-112
Smith-Waterman score: 3435; 100.0% identity (100.0% similar) in 505 aa overlap (1-505:1-505)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
430 440 450 460 470 480
490 500
pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ
:::::::::::::::::::::::::
CCDS24 PDIAWFQILLNTFDKSSGEEEDLEQ
490 500
>>CCDS42825.1 PAX3 gene_id:5077|Hs108|chr2 (484 aa)
initn: 3294 init1: 3294 opt: 3294 Z-score: 2038.8 bits: 386.7 E(32554): 3.1e-107
Smith-Waterman score: 3294; 100.0% identity (100.0% similar) in 484 aa overlap (1-484:1-484)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
430 440 450 460 470 480
490 500
pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ
::::
CCDS42 PDIA
>>CCDS46522.1 PAX3 gene_id:5077|Hs108|chr2 (483 aa)
initn: 2544 init1: 2544 opt: 3275 Z-score: 2027.2 bits: 384.6 E(32554): 1.4e-106
Smith-Waterman score: 3275; 99.8% identity (99.8% similar) in 484 aa overlap (1-484:1-483)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
CCDS46 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPK-VTTPDVEKKIEE
70 80 90 100 110
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
420 430 440 450 460 470
490 500
pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ
::::
CCDS46 PDIA
480
>>CCDS42826.1 PAX3 gene_id:5077|Hs108|chr2 (479 aa)
initn: 3224 init1: 3224 opt: 3224 Z-score: 1996.0 bits: 378.8 E(32554): 7.4e-105
Smith-Waterman score: 3224; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
430 440 450 460 470
490 500
pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ
>>CCDS2450.1 PAX3 gene_id:5077|Hs108|chr2 (403 aa)
initn: 2657 init1: 2657 opt: 2658 Z-score: 1650.1 bits: 314.5 E(32554): 1.4e-85
Smith-Waterman score: 2658; 98.2% identity (99.5% similar) in 399 aa overlap (1-399:1-399)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
:::::::::::::::::::::::::::::::: .....
CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVPFIISSQISRK
370 380 390 400
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
>>CCDS2449.1 PAX3 gene_id:5077|Hs108|chr2 (407 aa)
initn: 2657 init1: 2657 opt: 2658 Z-score: 1650.0 bits: 314.5 E(32554): 1.4e-85
Smith-Waterman score: 2658; 98.2% identity (99.5% similar) in 399 aa overlap (1-399:1-399)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
:::::::::::::::::::::::::::::::: .....
CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVPFIISSQISLGFKSF
370 380 390 400
430 440 450 460 470 480
pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
>>CCDS44074.1 PAX7 gene_id:5081|Hs108|chr1 (505 aa)
initn: 2344 init1: 1050 opt: 2515 Z-score: 1561.2 bits: 298.4 E(32554): 1.2e-80
Smith-Waterman score: 2515; 76.3% identity (89.8% similar) in 490 aa overlap (1-484:1-478)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
CCDS44 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
CCDS44 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPS--VSSISRILRSKFGKGEEE-EADLERKEA
:::::::::::::::.::::. :::.:::: ::::::.:: :::: ::: ::: :.
CCDS44 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEAD---KKE
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 EESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERA
...::::::::::::..... . :::::..:::::::::::::::::::::::::::.:
CCDS44 DDGEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT
::::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::
CCDS44 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAY
.::::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
CCDS44 GMPTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSP
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...::
CCDS44 ---GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISP
360 370 380 390 400
420 430 440 450 460 470
pF1KB5 LTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQS
: :::. .:..::::::: : .: :::::::.::::::::::::.:::.:::::::::.
CCDS44 LHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQT
410 420 430 440 450 460
480 490 500
pF1KB5 AFHYLKPDIAWFQILLNTFDKSSGEEEDLEQ
: :: ...
CCDS44 AVDYLAKNVSLSTQRRMKLGEHSAVLGLLPVETGQAY
470 480 490 500
>>CCDS44075.1 PAX7 gene_id:5081|Hs108|chr1 (518 aa)
initn: 1919 init1: 1079 opt: 2511 Z-score: 1558.6 bits: 298.0 E(32554): 1.7e-80
Smith-Waterman score: 2511; 77.8% identity (90.8% similar) in 478 aa overlap (1-474:1-466)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
CCDS44 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
CCDS44 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE-EADLERKEAEE
:::::::::::::::.::::. :::.::::::::::.:: :::: ::: ::: :. ..
CCDS44 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEEEDEAD---KKEDD
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 SEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFE
.::::::::::::..... . :::::..:::::::::::::::::::::::::::.:::
CCDS44 GEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAM
::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::.:
CCDS44 RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAYCL
:::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
CCDS44 PTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY--
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 PSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLT
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...:::
CCDS44 -GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISPLH
360 370 380 390 400
420 430 440 450 460 470
pF1KB5 GGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAF
:::. .:..::::::: : .: :::::::.::::::::::::.:::.::::::::::
CCDS44 GGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQSEC
410 420 430 440 450 460
480 490 500
pF1KB5 HYLKPDIAWFQILLNTFDKSSGEEEDLEQ
CCDS44 LVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT
470 480 490 500 510
>>CCDS186.1 PAX7 gene_id:5081|Hs108|chr1 (520 aa)
initn: 1884 init1: 1050 opt: 2497 Z-score: 1550.0 bits: 296.4 E(32554): 5.1e-80
Smith-Waterman score: 2497; 77.5% identity (90.4% similar) in 480 aa overlap (1-474:1-468)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
CCDS18 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
CCDS18 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPS--VSSISRILRSKFGKGEEE-EADLERKEA
:::::::::::::::.::::. :::.:::: ::::::.:: :::: ::: ::: :.
CCDS18 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEAD---KKE
130 140 150 160 170
180 190 200 210 220 230
pF1KB5 EESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERA
...::::::::::::..... . :::::..:::::::::::::::::::::::::::.:
CCDS18 DDGEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB5 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT
::::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::
CCDS18 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB5 AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAY
.::::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
CCDS18 GMPTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB5 CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSP
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...::
CCDS18 ---GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISP
360 370 380 390 400
420 430 440 450 460 470
pF1KB5 LTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQS
: :::. .:..::::::: : .: :::::::.::::::::::::.:::.::::::::::
CCDS18 LHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQS
410 420 430 440 450 460
480 490 500
pF1KB5 AFHYLKPDIAWFQILLNTFDKSSGEEEDLEQ
CCDS18 ECLVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT
470 480 490 500 510 520
>>CCDS2451.1 PAX3 gene_id:5077|Hs108|chr2 (206 aa)
initn: 1321 init1: 1321 opt: 1321 Z-score: 834.5 bits: 162.7 E(32554): 3.7e-40
Smith-Waterman score: 1321; 99.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
:::::::::::::::..:
CCDS24 EKKAKHSIDGILSERGKALVSGVSSH
190 200
505 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:38:27 2016 done: Sun Nov 6 04:38:28 2016
Total Scan time: 3.810 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]