Result of FASTA (omim) for
pFN21AB5904
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5904, 525 aa
1>>>pF1KB5904 525 - 525 aa - 525 aa
Library: /omim/omim.rfq.tfa
63781504 residues in 89704 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.3711+/-0.00037; mu= 1.9293+/- 0.023
mean_var=309.4701+/-63.720, 0's: 0 Z-trim(123.5): 91 B-trim: 1409 in 1/55
Lambda= 0.072906
statistics sampled from 44296 (44397) to 44296 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.495), width: 16
Scan time: 5.180
The best scores are: opt bits E(89704)
NP_000403 (OMIM: 142640,613116) histidine-rich gly ( 525) 3912 425.0 2.8e-118
XP_005247472 (OMIM: 142640,613116) PREDICTED: hist ( 533) 3886 422.3 1.9e-117
NP_055190 (OMIM: 605954) fetuin-B isoform 1 precur ( 382) 296 44.5 0.00071
XP_011510983 (OMIM: 605954) PREDICTED: fetuin-B is ( 382) 296 44.5 0.00071
XP_011532614 (OMIM: 610166) PREDICTED: IQ motif an (1006) 281 43.4 0.0041
XP_011532613 (OMIM: 610166) PREDICTED: IQ motif an (1006) 281 43.4 0.0041
XP_011532616 (OMIM: 610166) PREDICTED: IQ motif an (1006) 281 43.4 0.0041
XP_011532615 (OMIM: 610166) PREDICTED: IQ motif an (1006) 281 43.4 0.0041
NP_001127854 (OMIM: 610166) IQ motif and SEC7 doma (1114) 281 43.4 0.0044
XP_011532610 (OMIM: 610166) PREDICTED: IQ motif an (1128) 281 43.4 0.0044
XP_011532608 (OMIM: 610166) PREDICTED: IQ motif an (1129) 281 43.4 0.0044
XP_011532609 (OMIM: 610166) PREDICTED: IQ motif an (1129) 281 43.4 0.0044
XP_011532607 (OMIM: 610166) PREDICTED: IQ motif an (1132) 281 43.5 0.0044
XP_016863071 (OMIM: 610166) PREDICTED: IQ motif an (1207) 281 43.5 0.0046
XP_016863070 (OMIM: 610166) PREDICTED: IQ motif an (1212) 281 43.5 0.0046
XP_011532606 (OMIM: 610166) PREDICTED: IQ motif an (1222) 281 43.5 0.0047
NP_005030 (OMIM: 180989) basic salivary proline-ri ( 331) 264 41.1 0.0066
>>NP_000403 (OMIM: 142640,613116) histidine-rich glycopr (525 aa)
initn: 3912 init1: 3912 opt: 3912 Z-score: 2244.8 bits: 425.0 E(89704): 2.8e-118
Smith-Waterman score: 3912; 99.4% identity (99.6% similar) in 525 aa overlap (1-525:1-525)
10 20 30 40 50 60
pF1KB5 MKALIAALLLITLQYSCAVSPTDCSAVEPEAEKALDLINKRRRDGYLFQLLRIADAHLDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MKALIAALLLITLQYSCAVSPTDCSAVEPEAEKALDLINKRRRDGYLFQLLRIADAHLDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VENTTVYYLVLDVQESDCSVLSRKYWNDCEPPDSRRPSEIVIGQCKVIATRHSHESQDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VENTTVYYLVLDVQESDCSVLSRKYWNDCEPPDSRRPSEIVIGQCKVIATRHSHESQDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VIDFNCTTSSVSSALANTKDSPVLIDFFEDTERYRKQANKALEKYKEENDDFASFRVDRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VIDFNCTTSSVSSALANTKDSPVLIDFFEDTERYRKQANKALEKYKEENDDFASFRVDRI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 ERVARVRGGEGTGYFVDFSVRNCSRHHFPRHPNVFGFCRADLFYDVEALDLESPKNLVIN
::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
NP_000 ERVARVRGGEGTGYFVDFSVRNCPRHHFPRHPNVFGFCRADLFYDVEALDLESPKNLVIN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 CEVFDPQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKPHEHGPPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 CEVFDPQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKPHEHGPPPP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 PDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHSHEQH
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
NP_000 PDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRHSHNNNSSDLHPHKHHSHEQH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 PHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQDYGPCDPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQDYGPCDPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 PHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPEANFPSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPEANFPSF
430 440 450 460 470 480
490 500 510 520
pF1KB5 PLPHHKHPLKPDIQPFPQSVSESCPGKFKSGFPQVSMFFTHTFPK
:::::::::::: ::::::::::::::::::::::::::::::::
NP_000 PLPHHKHPLKPDNQPFPQSVSESCPGKFKSGFPQVSMFFTHTFPK
490 500 510 520
>>XP_005247472 (OMIM: 142640,613116) PREDICTED: histidin (533 aa)
initn: 2266 init1: 2266 opt: 3886 Z-score: 2229.9 bits: 422.3 E(89704): 1.9e-117
Smith-Waterman score: 3886; 97.9% identity (98.1% similar) in 533 aa overlap (1-525:1-533)
10 20 30 40 50 60
pF1KB5 MKALIAALLLITLQYSCAVSPTDCSAVEPEAEKALDLINKRRRDGYLFQLLRIADAHLDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MKALIAALLLITLQYSCAVSPTDCSAVEPEAEKALDLINKRRRDGYLFQLLRIADAHLDR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 VENTTVYYLVLDVQESDCSVLSRKYWNDCEPPDSRRPSEIVIGQCKVIATRHSHESQDLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VENTTVYYLVLDVQESDCSVLSRKYWNDCEPPDSRRPSEIVIGQCKVIATRHSHESQDLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 VIDFNCTTSSVSSALANTKDSPVLIDFFEDTERYRKQANKALEKYKEENDDFASFRVDRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VIDFNCTTSSVSSALANTKDSPVLIDFFEDTERYRKQANKALEKYKEENDDFASFRVDRI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 ERVARVRGGEGTGYFVDFSVRNCSRHHFPRHPNVFGFCRADLFYDVEALDLESPKNLVIN
::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
XP_005 ERVARVRGGEGTGYFVDFSVRNCPRHHFPRHPNVFGFCRADLFYDVEALDLESPKNLVIN
190 200 210 220 230 240
250 260 270 280 290
pF1KB5 CEVFDPQ--------EHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKP
::::::: :::::::::::::::::::::::::::::::::::::::::::::
XP_005 CEVFDPQALFCDLFQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB5 HEHGPPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPH
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_005 HEHGPPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRHSHNNNSSDLHPH
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB5 KHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHDFQ
370 380 390 400 410 420
420 430 440 450 460 470
pF1KB5 DYGPCDPPPHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DYGPCDPPPHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPL
430 440 450 460 470 480
480 490 500 510 520
pF1KB5 PEANFPSFPLPHHKHPLKPDIQPFPQSVSESCPGKFKSGFPQVSMFFTHTFPK
:::::::::::::::::::: ::::::::::::::::::::::::::::::::
XP_005 PEANFPSFPLPHHKHPLKPDNQPFPQSVSESCPGKFKSGFPQVSMFFTHTFPK
490 500 510 520 530
>>NP_055190 (OMIM: 605954) fetuin-B isoform 1 precursor (382 aa)
initn: 265 init1: 116 opt: 296 Z-score: 191.0 bits: 44.5 E(89704): 0.00071
Smith-Waterman score: 298; 28.2% identity (53.3% similar) in 323 aa overlap (13-310:32-334)
10 20 30 40
pF1KB5 MKALIAALLLITLQYSCAVSPTDCSAVEPEAEKALDLINKRR
:. .: . .: :: : :: ::: :
NP_055 GLLLPLALCILVLCCGAMSPPQLALNPSALLSRGC--NDSDVLAV---AGFALRDINKDR
10 20 30 40 50
50 60 70 80 90 100
pF1KB5 RDGYLFQLLRIADAHLDRVENT-TVYYLVLDVQESDCSVLSRKYWNDCEPPDSRRPSEIV
.:::...: :. ::. : . ...::.::: :.:: :: .: :.:: : : :
NP_055 KDGYVLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDC---GMRIFFESV
60 70 80 90 100 110
110 120 130 140 150
pF1KB5 IGQCKVIATRHSHESQDLRVIDFNCTTSSVSSA--LANTKDSPVLIDFFEDTERYRKQAN
::::.: .. :. : . .::: ::. . : : : .... . :.
NP_055 YGQCKAI-FYMNNPSRVLYLAAYNCTLRPVSKKKIYMTCPDCPSSIPTDSSNHQVLEAAT
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB5 KALEKYKEENDD--FASFRVDRIERVARVRGGEGTGYFVDFSVRN--CSRHH-----FPR
..: ::..:: . .. :.: : : . : .:::.. ... :.. . .
NP_055 ESLAKYNNENTSKQYSLFKVTR----ASSQWVVGPSYFVEYLIKESPCTKSQASSCSLQS
180 190 200 210 220
220 230 240 250 260
pF1KB5 HPNV-FGFCRADLFYDVEALDLESPKNLVINCEVFDPQ------EHENINGVPPHLGHPF
.: :.:...: . : . ..:. :. : :. .: : .: .
NP_055 SDSVPVGLCKGSLTRT------HWEKFVSVTCDFFESQAPATGSENSAVNQKPTNLPK-V
230 240 250 260 270 280
270 280 290 300 310
pF1KB5 HWGGHERSSTTKPPFK--PHGSRDHH---HPHKPHEHGPPPP-PDERDHSHGPPLPQGPP
. . .. . : : : :.:: .. .. .:.:: : . : . .:
NP_055 EESQQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQEKGPQEAFPVHLDLTTNPQGETLDI
290 300 310 320 330 340
320 330 340 350 360 370
pF1KB5 PLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHSHEQHPHGHHPHAHHPHEHDTH
NP_055 SFLFLEPMEEKLVVLPFPKEKARTAECPGPAQNASPLVLPP
350 360 370 380
>>XP_011510983 (OMIM: 605954) PREDICTED: fetuin-B isofor (382 aa)
initn: 265 init1: 116 opt: 296 Z-score: 191.0 bits: 44.5 E(89704): 0.00071
Smith-Waterman score: 298; 28.2% identity (53.3% similar) in 323 aa overlap (13-310:32-334)
10 20 30 40
pF1KB5 MKALIAALLLITLQYSCAVSPTDCSAVEPEAEKALDLINKRR
:. .: . .: :: : :: ::: :
XP_011 GLLLPLALCILVLCCGAMSPPQLALNPSALLSRGC--NDSDVLAV---AGFALRDINKDR
10 20 30 40 50
50 60 70 80 90 100
pF1KB5 RDGYLFQLLRIADAHLDRVENT-TVYYLVLDVQESDCSVLSRKYWNDCEPPDSRRPSEIV
.:::...: :. ::. : . ...::.::: :.:: :: .: :.:: : : :
XP_011 KDGYVLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDC---GMRIFFESV
60 70 80 90 100 110
110 120 130 140 150
pF1KB5 IGQCKVIATRHSHESQDLRVIDFNCTTSSVSSA--LANTKDSPVLIDFFEDTERYRKQAN
::::.: .. :. : . .::: ::. . : : : .... . :.
XP_011 YGQCKAI-FYMNNPSRVLYLAAYNCTLRPVSKKKIYMTCPDCPSSIPTDSSNHQVLEAAT
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB5 KALEKYKEENDD--FASFRVDRIERVARVRGGEGTGYFVDFSVRN--CSRHH-----FPR
..: ::..:: . .. :.: : : . : .:::.. ... :.. . .
XP_011 ESLAKYNNENTSKQYSLFKVTR----ASSQWVVGPSYFVEYLIKESPCTKSQASSCSLQS
180 190 200 210 220
220 230 240 250 260
pF1KB5 HPNV-FGFCRADLFYDVEALDLESPKNLVINCEVFDPQ------EHENINGVPPHLGHPF
.: :.:...: . : . ..:. :. : :. .: : .: .
XP_011 SDSVPVGLCKGSLTRT------HWEKFVSVTCDFFESQAPATGSENSAVNQKPTNLPK-V
230 240 250 260 270 280
270 280 290 300 310
pF1KB5 HWGGHERSSTTKPPFK--PHGSRDHH---HPHKPHEHGPPPP-PDERDHSHGPPLPQGPP
. . .. . : : : :.:: .. .. .:.:: : . : . .:
XP_011 EESQQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQEKGPQEAFPVHLDLTTNPQGETLDI
290 300 310 320 330 340
320 330 340 350 360 370
pF1KB5 PLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHSHEQHPHGHHPHAHHPHEHDTH
XP_011 SFLFLEPMEEKLVVLPFPKEKARTAECPGPAQNASPLVLPP
350 360 370 380
>>XP_011532614 (OMIM: 610166) PREDICTED: IQ motif and SE (1006 aa)
initn: 188 init1: 188 opt: 281 Z-score: 177.3 bits: 43.4 E(89704): 0.0041
Smith-Waterman score: 281; 32.7% identity (47.4% similar) in 171 aa overlap (271-435:841-987)
250 260 270 280 290
pF1KB5 CEVFDPQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKPH----EHG
.:: . : .:: . . ..:
XP_011 GKRGRRSSAGSLESNVEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRG
820 830 840 850 860 870
300 310 320 330 340 350
pF1KB5 PPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHS
::: ..: : : ::: :. ::.. : . . .. . . : : ..
XP_011 KPPP-----QAHLPSAPALPPPHPPVVLPHLQHSVAGHHLGPPEGLPQAAMHGH-HTQYC
880 890 900 910 920
360 370 380 390 400 410
pF1KB5 HEQHPHG-HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHP-HGHHPHGHHPHCHDFQDY
: :.: :: : ::: .: :: : .: :: ::: :: .: : ::: :
XP_011 HMQNPPPYHHHHHHHPPQH---IQHAHQYH-HG--PHGGHPAYGAHAHGHPPL-------
930 940 950 960 970
420 430 440 450 460 470
pF1KB5 GPCDPPPHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPE
: . :: : :: ::
XP_011 -----PSAHVGHTVHHHGQPPAPPPPTSSKAKPSGISTIV
980 990 1000
>>XP_011532613 (OMIM: 610166) PREDICTED: IQ motif and SE (1006 aa)
initn: 188 init1: 188 opt: 281 Z-score: 177.3 bits: 43.4 E(89704): 0.0041
Smith-Waterman score: 281; 32.7% identity (47.4% similar) in 171 aa overlap (271-435:841-987)
250 260 270 280 290
pF1KB5 CEVFDPQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKPH----EHG
.:: . : .:: . . ..:
XP_011 GKRGRRSSAGSLESNVEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRG
820 830 840 850 860 870
300 310 320 330 340 350
pF1KB5 PPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHS
::: ..: : : ::: :. ::.. : . . .. . . : : ..
XP_011 KPPP-----QAHLPSAPALPPPHPPVVLPHLQHSVAGHHLGPPEGLPQAAMHGH-HTQYC
880 890 900 910 920
360 370 380 390 400 410
pF1KB5 HEQHPHG-HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHP-HGHHPHGHHPHCHDFQDY
: :.: :: : ::: .: :: : .: :: ::: :: .: : ::: :
XP_011 HMQNPPPYHHHHHHHPPQH---IQHAHQYH-HG--PHGGHPAYGAHAHGHPPL-------
930 940 950 960 970
420 430 440 450 460 470
pF1KB5 GPCDPPPHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPE
: . :: : :: ::
XP_011 -----PSAHVGHTVHHHGQPPAPPPPTSSKAKPSGISTIV
980 990 1000
>>XP_011532616 (OMIM: 610166) PREDICTED: IQ motif and SE (1006 aa)
initn: 188 init1: 188 opt: 281 Z-score: 177.3 bits: 43.4 E(89704): 0.0041
Smith-Waterman score: 281; 32.7% identity (47.4% similar) in 171 aa overlap (271-435:841-987)
250 260 270 280 290
pF1KB5 CEVFDPQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKPH----EHG
.:: . : .:: . . ..:
XP_011 GKRGRRSSAGSLESNVEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRG
820 830 840 850 860 870
300 310 320 330 340 350
pF1KB5 PPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHS
::: ..: : : ::: :. ::.. : . . .. . . : : ..
XP_011 KPPP-----QAHLPSAPALPPPHPPVVLPHLQHSVAGHHLGPPEGLPQAAMHGH-HTQYC
880 890 900 910 920
360 370 380 390 400 410
pF1KB5 HEQHPHG-HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHP-HGHHPHGHHPHCHDFQDY
: :.: :: : ::: .: :: : .: :: ::: :: .: : ::: :
XP_011 HMQNPPPYHHHHHHHPPQH---IQHAHQYH-HG--PHGGHPAYGAHAHGHPPL-------
930 940 950 960 970
420 430 440 450 460 470
pF1KB5 GPCDPPPHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPE
: . :: : :: ::
XP_011 -----PSAHVGHTVHHHGQPPAPPPPTSSKAKPSGISTIV
980 990 1000
>>XP_011532615 (OMIM: 610166) PREDICTED: IQ motif and SE (1006 aa)
initn: 188 init1: 188 opt: 281 Z-score: 177.3 bits: 43.4 E(89704): 0.0041
Smith-Waterman score: 281; 32.7% identity (47.4% similar) in 171 aa overlap (271-435:841-987)
250 260 270 280 290
pF1KB5 CEVFDPQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKPH----EHG
.:: . : .:: . . ..:
XP_011 GKRGRRSSAGSLESNVEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRG
820 830 840 850 860 870
300 310 320 330 340 350
pF1KB5 PPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHS
::: ..: : : ::: :. ::.. : . . .. . . : : ..
XP_011 KPPP-----QAHLPSAPALPPPHPPVVLPHLQHSVAGHHLGPPEGLPQAAMHGH-HTQYC
880 890 900 910 920
360 370 380 390 400 410
pF1KB5 HEQHPHG-HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHP-HGHHPHGHHPHCHDFQDY
: :.: :: : ::: .: :: : .: :: ::: :: .: : ::: :
XP_011 HMQNPPPYHHHHHHHPPQH---IQHAHQYH-HG--PHGGHPAYGAHAHGHPPL-------
930 940 950 960 970
420 430 440 450 460 470
pF1KB5 GPCDPPPHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPE
: . :: : :: ::
XP_011 -----PSAHVGHTVHHHGQPPAPPPPTSSKAKPSGISTIV
980 990 1000
>>NP_001127854 (OMIM: 610166) IQ motif and SEC7 domain-c (1114 aa)
initn: 188 init1: 188 opt: 281 Z-score: 176.7 bits: 43.4 E(89704): 0.0044
Smith-Waterman score: 281; 32.7% identity (47.4% similar) in 171 aa overlap (271-435:949-1095)
250 260 270 280 290
pF1KB5 CEVFDPQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKPH----EHG
.:: . : .:: . . ..:
NP_001 GKRGRRSSAGSLESNVEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRG
920 930 940 950 960 970
300 310 320 330 340 350
pF1KB5 PPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHS
::: ..: : : ::: :. ::.. : . . .. . . : : ..
NP_001 KPPP-----QAHLPSAPALPPPHPPVVLPHLQHSVAGHHLGPPEGLPQAAMHGH-HTQYC
980 990 1000 1010 1020 1030
360 370 380 390 400 410
pF1KB5 HEQHPHG-HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHP-HGHHPHGHHPHCHDFQDY
: :.: :: : ::: .: :: : .: :: ::: :: .: : ::: :
NP_001 HMQNPPPYHHHHHHHPPQH---IQHAHQYH-HG--PHGGHPAYGAHAHGHPPL-------
1040 1050 1060 1070
420 430 440 450 460 470
pF1KB5 GPCDPPPHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPE
: . :: : :: ::
NP_001 -----PSAHVGHTVHHHGQPPAPPPPTSSKAKPSGISTIV
1080 1090 1100 1110
>>XP_011532610 (OMIM: 610166) PREDICTED: IQ motif and SE (1128 aa)
initn: 188 init1: 188 opt: 281 Z-score: 176.7 bits: 43.4 E(89704): 0.0044
Smith-Waterman score: 281; 32.7% identity (47.4% similar) in 171 aa overlap (271-435:963-1109)
250 260 270 280 290
pF1KB5 CEVFDPQEHENINGVPPHLGHPFHWGGHERSSTTKPPFKPHGSRDHHHPHKPH----EHG
.:: . : .:: . . ..:
XP_011 GKRGRRSSAGSLESNVEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRG
940 950 960 970 980 990
300 310 320 330 340 350
pF1KB5 PPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQRRSHNNNSSDLHPHKHHS
::: ..: : : ::: :. ::.. : . . .. . . : : ..
XP_011 KPPP-----QAHLPSAPALPPPHPPVVLPHLQHSVAGHHLGPPEGLPQAAMHGH-HTQYC
1000 1010 1020 1030 1040
360 370 380 390 400 410
pF1KB5 HEQHPHG-HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHP-HGHHPHGHHPHCHDFQDY
: :.: :: : ::: .: :: : .: :: ::: :: .: : ::: :
XP_011 HMQNPPPYHHHHHHHPPQH---IQHAHQYH-HG--PHGGHPAYGAHAHGHPPL-------
1050 1060 1070 1080 1090
420 430 440 450 460 470
pF1KB5 GPCDPPPHNQGHCCHGHGPPPGHLRRRGPGKGPRPFHCRQIGSVYRLPPLRKGEVLPLPE
: . :: : :: ::
XP_011 -----PSAHVGHTVHHHGQPPAPPPPTSSKAKPSGISTIV
1100 1110 1120
525 residues in 1 query sequences
63781504 residues in 89704 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Jan 30 11:05:01 2018 done: Tue Jan 30 11:05:02 2018
Total Scan time: 5.180 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]