Result of FASTA (omim) for
pFN21AB5806
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5806, 452 aa
1>>>pF1KB5806 452 - 452 aa - 452 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6378+/-0.000323; mu= 16.0697+/- 0.020
mean_var=77.2996+/-15.724, 0's: 0 Z-trim(114.5): 25 B-trim: 203 in 1/53
Lambda= 0.145877
statistics sampled from 24352 (24377) to 24352 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.286), width: 16
Scan time: 9.830
The best scores are: opt bits E(85289)
NP_758438 (OMIM: 610161) transcription factor AP-2 ( 452) 3014 644.0 2.5e-184
NP_003211 (OMIM: 107580,113620) transcription fact ( 437) 1185 259.0 1.8e-68
NP_001027451 (OMIM: 107580,113620) transcription f ( 431) 1181 258.2 3.2e-68
NP_001035890 (OMIM: 107580,113620) transcription f ( 433) 1179 257.8 4.3e-68
XP_006715238 (OMIM: 107580,113620) PREDICTED: tran ( 482) 1178 257.6 5.4e-68
XP_016866721 (OMIM: 107580,113620) PREDICTED: tran ( 519) 1178 257.6 5.7e-68
NP_003212 (OMIM: 169100,601601,617035) transcripti ( 460) 1105 242.2 2.2e-63
XP_011513139 (OMIM: 169100,601601,617035) PREDICTE ( 469) 1104 242.0 2.6e-63
XP_016866723 (OMIM: 169100,601601,617035) PREDICTE ( 503) 1104 242.0 2.7e-63
XP_016866722 (OMIM: 169100,601601,617035) PREDICTE ( 515) 1104 242.0 2.8e-63
XP_011513135 (OMIM: 107580,113620) PREDICTED: tran ( 387) 1100 241.1 3.9e-63
NP_848643 (OMIM: 614428) transcription factor AP-2 ( 442) 1069 234.6 4e-61
XP_016866724 (OMIM: 169100,601601,617035) PREDICTE ( 307) 1061 232.8 9.6e-61
NP_003213 (OMIM: 601602) transcription factor AP-2 ( 450) 1008 221.8 3e-57
XP_016856628 (OMIM: 614428) PREDICTED: transcripti ( 356) 748 167.0 7.3e-41
>>NP_758438 (OMIM: 610161) transcription factor AP-2-del (452 aa)
initn: 3014 init1: 3014 opt: 3014 Z-score: 3430.4 bits: 644.0 E(85289): 2.5e-184
Smith-Waterman score: 3014; 100.0% identity (100.0% similar) in 452 aa overlap (1-452:1-452)
10 20 30 40 50 60
pF1KB5 MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 MSTTFPGLVHDAEIRHDGSNSYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASPYF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 STNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFINLHNAR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAAAGADDLQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 ALKSSCLDEQRRELGCLDAYRRHDLSLMSHGSQYGMHPDQRLLPGPSLGLAAAGADDLQG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 SVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 SVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 PECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 PECLNASLLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 ARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 ARDFGYTCETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 SSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_758 SSRPTPILDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGA
370 380 390 400 410 420
430 440 450
pF1KB5 ADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD
::::::::::::::::::::::::::::::::
NP_758 ADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD
430 440 450
>>NP_003211 (OMIM: 107580,113620) transcription factor A (437 aa)
initn: 1150 init1: 1098 opt: 1185 Z-score: 1350.3 bits: 259.0 E(85289): 1.8e-68
Smith-Waterman score: 1218; 50.3% identity (70.2% similar) in 453 aa overlap (11-437:13-437)
10 20 30 40 50
pF1KB5 MSTTFPGLVHDAEIRHDGSN--SYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFA
: : ::::.. . :: ::: .:..: :.:. ::.. : ...:
NP_003 MLWKLTDNIKYEDCEDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQ
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 SPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFIN-
::: .: :.. :: . .:: . : :::: :: . : : : : . .
NP_003 PPYFPPPYQ--PIYPQS---QDPYSH---VNDPYSLNPLHAQPQPQ---HPGWPGQRQSQ
60 70 80 90 100
120 130 140 150
pF1KB5 ----LHNARAL--KSSCLDEQRRELGCLDAYRRH---------------DLSLMS--HGS
::. :.: . : :: ::. :::: :::. : :.
NP_003 ESGLLHTHRGLPHQLSGLDP-RRD------YRRHEDLLHGPHALSSGLGDLSIHSLPHAI
110 120 130 140 150
160 170 180 190 200 210
pF1KB5 QYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFC
. : .. . :. . : .:. : . . .. ... :: ::::...::
NP_003 EEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLF--GG--VVNPNEVFC
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB5 SVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRL
::::::::::::::::::.:::.::::::::::::::::.::::::::::: ::::::..
NP_003 SVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKI
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB5 GLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQT
:::::::::::::::::::::::::.::::::::.::::::::::.: : ::: . .::.
NP_003 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQV
280 290 300 310 320 330
340 350 360 370 380 390
pF1KB5 ARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAIC
.::.:.:::::::::: :::.:::::::.:::.:::. :: ::::.::.::::.::.:
NP_003 TRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVC
340 350 360 370 380 390
400 410 420 430 440 450
pF1KB5 AALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD
::....:. :.: :. ..: .: .. .......... ::
NP_003 AAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
400 410 420 430
>>NP_001027451 (OMIM: 107580,113620) transcription facto (431 aa)
initn: 1150 init1: 1098 opt: 1181 Z-score: 1345.9 bits: 258.2 E(85289): 3.2e-68
Smith-Waterman score: 1214; 50.2% identity (70.1% similar) in 458 aa overlap (8-437:2-431)
10 20 30 40 50
pF1KB5 MSTTFPGLVHD--AEIRHDGSN--SYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFA
:::. : ::::.. . :: ::: .:..: :.:. ::.. : ...:
NP_001 MLVHSFSAMDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQ
10 20 30 40
60 70 80 90 100 110
pF1KB5 SPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFIN-
::: .: :.. :: . .:: . : :::: :: . : : : : . .
NP_001 PPYFPPPYQ--PIYPQS---QDPYSH---VNDPYSLNPLHAQPQ---PQHPGWPGQRQSQ
50 60 70 80 90
120 130 140 150
pF1KB5 ----LHNARAL--KSSCLDEQRRELGCLDAYRRH---------------DLSLMS--HGS
::. :.: . : :: ::. :::: :::. : :.
NP_001 ESGLLHTHRGLPHQLSGLDP-RRD------YRRHEDLLHGPHALSSGLGDLSIHSLPHAI
100 110 120 130 140 150
160 170 180 190 200 210
pF1KB5 QYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFC
. : .. . :. . : .:. : . . .. ... :: ::::...::
NP_001 EEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLF--GG--VVNPNEVFC
160 170 180 190 200
220 230 240 250 260 270
pF1KB5 SVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRL
::::::::::::::::::.:::.::::::::::::::::.::::::::::: ::::::..
NP_001 SVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKI
210 220 230 240 250 260
280 290 300 310 320 330
pF1KB5 GLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQT
:::::::::::::::::::::::::.::::::::.::::::::::.: : ::: . .::.
NP_001 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQV
270 280 290 300 310 320
340 350 360 370 380 390
pF1KB5 ARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAIC
.::.:.:::::::::: :::.:::::::.:::.:::. :: ::::.::.::::.::.:
NP_001 TRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVC
330 340 350 360 370 380
400 410 420 430 440 450
pF1KB5 AALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD
::....:. :.: :. ..: .: .. .......... ::
NP_001 AAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
390 400 410 420 430
>>NP_001035890 (OMIM: 107580,113620) transcription facto (433 aa)
initn: 1150 init1: 1098 opt: 1179 Z-score: 1343.5 bits: 257.8 E(85289): 4.3e-68
Smith-Waterman score: 1212; 50.1% identity (70.2% similar) in 453 aa overlap (11-437:9-433)
10 20 30 40 50
pF1KB5 MSTTFPGLVHDAEIRHDGSN--SYRLMQLGCLESVANSTVAYSSSSPLTYSTTGTEFASP
: . ::::.. . :: ::: .:..: :.:. ::.. : ...: :
NP_001 MSILAKMGDWQDRHDGTSNGTARLPQLG---TVGQSP--YTSAPPLSH-TPNADFQPP
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 YFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQYYQQIHHGEPTDFIN---
:: .: :.. :: . .:: . : :::: :: . : : : : . .
NP_001 YFPPPYQ--PIYPQS---QDPYSH---VNDPYSLNPLHAQPQPQ---HPGWPGQRQSQES
60 70 80 90 100
120 130 140 150
pF1KB5 --LHNARAL--KSSCLDEQRRELGCLDAYRRH---------------DLSLMS--HGSQY
::. :.: . : :: ::. :::: :::. : :. .
NP_001 GLLHTHRGLPHQLSGLDP-RRD------YRRHEDLLHGPHALSSGLGDLSIHSLPHAIEE
110 120 130 140 150
160 170 180 190 200 210
pF1KB5 GMHPDQRLLPGPSLGLAAAGADDLQGSVEAQCGLVLNGQGGVIRRGGTCVVNPTDLFCSV
: .. . :. . : .:. : . . .. ... :: ::::...::::
NP_001 VPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLF--GG--VVNPNEVFCSV
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB5 PGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKSKNGGRCLREKLDRLGL
::::::::::::::::.:::.::::::::::::::::.::::::::::: ::::::..::
NP_001 PGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGL
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB5 NLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVGEHLARQHMEQKEQTAR
:::::::::::::::::::::::.::::::::.::::::::::.: : ::: . .::..:
NP_001 NLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVTR
280 290 300 310 320 330
340 350 360 370 380 390
pF1KB5 KKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTHFSLITHGFGTPAICAA
:.:.:::::::::: :::.:::::::.:::.:::. :: ::::.::.::::.::.:::
NP_001 KNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAA
340 350 360 370 380 390
400 410 420 430 440 450
pF1KB5 LSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD
....:. :.: :. ..: .: .. .......... ::
NP_001 VTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHRK
400 410 420 430
>>XP_006715238 (OMIM: 107580,113620) PREDICTED: transcri (482 aa)
initn: 1150 init1: 1098 opt: 1178 Z-score: 1341.7 bits: 257.6 E(85289): 5.4e-68
Smith-Waterman score: 1211; 50.6% identity (70.5% similar) in 451 aa overlap (13-437:60-482)
10 20 30 40
pF1KB5 MSTTFPGLVHDAEIRHDGSN--SYRLMQLGCLESVANSTVAY
: ::::.. . :: ::: .:..: :
XP_006 GSACRAESPTSARTRSQAAPTRYARPPLHPEDRHDGTSNGTARLPQLG---TVGQS--PY
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB5 SSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQ
.:. ::.. : ...: ::: .: :.. :: . .:: . : :::: :: . :
XP_006 TSAPPLSH-TPNADFQPPYFPPPYQ--PIYPQS---QDPYSH---VNDPYSLNPLHAQPQ
90 100 110 120 130
110 120 130 140
pF1KB5 YYQQIHHGEPTDFIN-----LHNARAL--KSSCLDEQRRELGCLDAYRRH----------
: : : : . . ::. :.: . : :: .: : ::::
XP_006 --PQ-HPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRR------D-YRRHEDLLHGPHAL
140 150 160 170 180
150 160 170 180 190
pF1KB5 -----DLSLMS--HGSQYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQCGLVLNGQGGV
:::. : :. . : .. . :. . : .:. : . . .. ..
XP_006 SSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNL
190 200 210 220 230 240
200 210 220 230 240 250
pF1KB5 IRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRA
. :: ::::...::::::::::::::::::::.:::.::::::::::::::::.::::
XP_006 F--GG--VVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRA
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB5 KSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKA
::::::: ::::::..:::::::::::::::::::::::::.::::::::.:::::::::
XP_006 KSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKA
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB5 VGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHL
:.: : ::: . .::..::.:.:::::::::: :::.:::::::.:::.:::. :: :
XP_006 VAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCL
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB5 THFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHANSEKAPLR
:::.::.::::.::.:::....:. :.: :. ..: .: .. .......... :
XP_006 THFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSSDKEEKHR
430 440 450 460 470 480
440 450
pF1KB5 KTSEAAVKEGKTEKTD
:
XP_006 K
>>XP_016866721 (OMIM: 107580,113620) PREDICTED: transcri (519 aa)
initn: 1150 init1: 1098 opt: 1178 Z-score: 1341.2 bits: 257.6 E(85289): 5.7e-68
Smith-Waterman score: 1211; 50.0% identity (70.3% similar) in 458 aa overlap (6-437:92-519)
10 20 30
pF1KB5 MSTTFPGLVHDAEIRHDGSN--SYRLMQLGCLESV
:.: .: . ::::.. . :: ::: .:
XP_016 SLPRSALCGAGTAAGGVNSWASAHASAGSNPAL-YDQD-RHDGTSNGTARLPQLG---TV
70 80 90 100 110
40 50 60 70 80 90
pF1KB5 ANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLN
..: :.:. ::.. : ...: ::: .: :.. :: . .:: . : ::::
XP_016 GQS--PYTSAPPLSH-TPNADFQPPYFPPPYQ--PIYPQS---QDPYSH---VNDPYSLN
120 130 140 150 160
100 110 120 130 140
pF1KB5 SLHHSQQYYQQIHHGEPTDFIN-----LHNARAL--KSSCLDEQRRELGCLDAYRRH---
:: . : : : : . . ::. :.: . : :: ::. ::::
XP_016 PLHAQPQPQ---HPGWPGQRQSQESGLLHTHRGLPHQLSGLDP-RRD------YRRHEDL
170 180 190 200 210
150 160 170 180
pF1KB5 ------------DLSLMS--HGSQYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQCGLV
:::. : :. . : .. . :. . : .:. : . .
XP_016 LHGPHALSSGLGDLSIHSLPHAIEEVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAI
220 230 240 250 260 270
190 200 210 220 230 240
pF1KB5 LNGQGGVIRRGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLL
.. ... :: ::::...::::::::::::::::::::.:::.::::::::::::::
XP_016 PINKDNLF--GG--VVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLL
280 290 300 310 320 330
250 260 270 280 290 300
pF1KB5 GGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCE
::.::::::::::: ::::::..:::::::::::::::::::::::::.::::::::.::
XP_016 GGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCE
340 350 360 370 380 390
310 320 330 340 350 360
pF1KB5 TEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILD
::::::::.: : ::: . .::..::.:.:::::::::: :::.:::::::.:::.:::.
XP_016 TEFPAKAVAEFLNRQHSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILE
400 410 420 430 440 450
370 380 390 400 410 420
pF1KB5 LDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEKHTTHKNGGAADSGQGHAN
:: ::::.::.::::.::.:::....:. :.: :. ..: .: .. .......
XP_016 PGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSS
460 470 480 490 500 510
430 440 450
pF1KB5 SEKAPLRKTSEAAVKEGKTEKTD
... ::
XP_016 DKEEKHRK
>>NP_003212 (OMIM: 169100,601601,617035) transcription f (460 aa)
initn: 1239 init1: 1049 opt: 1105 Z-score: 1259.0 bits: 242.2 E(85289): 2.2e-63
Smith-Waterman score: 1212; 51.4% identity (69.2% similar) in 451 aa overlap (13-432:27-454)
10 20 30 40
pF1KB5 MSTTFPGLVHDAEIRHDG--SNSYRLMQLGCLESVANSTVAYSSSS
: :::: :.: :: ::: ::... :::.
NP_003 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLG---SVSQG--PYSSAP
10 20 30 40 50
50 60 70 80 90 100
pF1KB5 PLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSLHHSQQY---
::.. : ...: ::: .: : .::: . .:: . : :::: ::. ::.
NP_003 PLSH-TPSSDFQPPYFPPPYQPLP-YHQS---QDPYSH---VNDPYSLNPLHQPQQHPWG
60 70 80 90 100
110 120 130 140 150
pF1KB5 -YQQIHHG-EPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSLMS--HGSQYGMH
:. . : : ... : . : :: ::. . :: :. : : :: . ::
NP_003 QRQRQEVGSEAGSLLPQPRAALPQLSGLDP-RRD---YHSVRRPDVLLHSAHHGLDAGMG
110 120 130 140 150 160
160 170 180 190 200
pF1KB5 PDQRLLPGPSLGLAAAGADDLQGSVEAQ-CGLVLNGQGGVIRR----------------G
. : ::. : .:.:. .:. :. : :. ::.. :
NP_003 DSLSLH-----GLGHPGMEDVQSVEDANNSGMNLLDQS-VIKKVPVPPKSVTSLMMNKDG
170 180 190 200 210
210 220 230 240 250
pF1KB5 --GTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGILRRAKS
: :: ..::::::::::::::::::::..::.::::::::::::::::.::::::
NP_003 FLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKS
220 230 240 250 260 270
260 270 280 290 300 310
pF1KB5 KNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFPAKAVG
::::: :::.:...:::::::::::::::::::::::::.:::::::: ::::::::::.
NP_003 KNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVS
280 290 300 310 320 330
320 330 340 350 360 370
pF1KB5 EHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILDLDIQRHLTH
:.: ::: . .. .::.:.:::::.:::: :::.:::.:.:.:::.:::. :: :::
NP_003 EYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTH
340 350 360 370 380 390
380 390 400 410 420 430
pF1KB5 FSLITHGFGTPAICAALSTFQTVLSEMLNYLEK---HTTHKNGGAADSGQGHANSEKAPL
:::::::::.:::::::...:. :.: :. ..: ..: : .. : : ...:
NP_003 FSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEK
400 410 420 430 440 450
440 450
pF1KB5 RKTSEAAVKEGKTEKTD
NP_003 HRK
460
>>XP_011513139 (OMIM: 169100,601601,617035) PREDICTED: t (469 aa)
initn: 1239 init1: 1049 opt: 1104 Z-score: 1257.7 bits: 242.0 E(85289): 2.6e-63
Smith-Waterman score: 1211; 50.9% identity (68.8% similar) in 458 aa overlap (8-432:29-463)
10 20 30
pF1KB5 MSTTFPGLVH--DAEIRHDG--SNSYRLMQLGCLESVAN
::: .. :::: :.: :: ::: ::..
XP_011 MHSPPRDQAAIMLWKLVENVKYEDIYEMLVHTYSSMDRHDGVPSHSSRLSQLG---SVSQ
10 20 30 40 50
40 50 60 70 80 90
pF1KB5 STVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLNSL
. :::. ::.. : ...: ::: .: : .::: . .:: . : :::: :
XP_011 GP--YSSAPPLSH-TPSSDFQPPYFPPPYQPLP-YHQS---QDPYSH---VNDPYSLNPL
60 70 80 90 100
100 110 120 130 140
pF1KB5 HHSQQY----YQQIHHG-EPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSLMS-
:. ::. :. . : : ... : . : :: .: . :: :. : :
XP_011 HQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRD----YHSVRRPDVLLHSA
110 120 130 140 150 160
150 160 170 180 190
pF1KB5 -HGSQYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQ-CGLVLNGQGGVIRR--------
:: . :: . : ::. : .:.:. .:. :. : :. ::..
XP_011 HHGLDAGMGDSLSLH-----GLGHPGMEDVQSVEDANNSGMNLLDQS-VIKKVPVPPKSV
170 180 190 200 210
200 210 220 230 240
pF1KB5 --------G--GTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLL
: : :: ..::::::::::::::::::::..::.::::::::::::::
XP_011 TSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLL
220 230 240 250 260 270
250 260 270 280 290 300
pF1KB5 GGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCE
::.::::::::::: :::.:...:::::::::::::::::::::::::.:::::::: ::
XP_011 GGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICE
280 290 300 310 320 330
310 320 330 340 350 360
pF1KB5 TEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPILD
::::::::.:.: ::: . .. .::.:.:::::.:::: :::.:::.:.:.:::.:::.
XP_011 TEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILE
340 350 360 370 380 390
370 380 390 400 410 420
pF1KB5 LDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEK---HTTHKNGGAADSGQG
:: ::::::::::::.:::::::...:. :.: :. ..: ..: : .. : :
XP_011 PGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPG
400 410 420 430 440 450
430 440 450
pF1KB5 HANSEKAPLRKTSEAAVKEGKTEKTD
...:
XP_011 SKTGDKEEKHRK
460
>>XP_016866723 (OMIM: 169100,601601,617035) PREDICTED: t (503 aa)
initn: 1239 init1: 1049 opt: 1104 Z-score: 1257.3 bits: 242.0 E(85289): 2.7e-63
Smith-Waterman score: 1211; 50.9% identity (68.8% similar) in 458 aa overlap (8-432:63-497)
10 20 30
pF1KB5 MSTTFPGLVH--DAEIRHDG--SNSYRLMQLGCLESV
::: .. :::: :.: :: ::: ::
XP_016 GSLWRMSSTKISMSTQGDQVLRIREVSLQMLVHTYSSMDRHDGVPSHSSRLSQLG---SV
40 50 60 70 80
40 50 60 70 80 90
pF1KB5 ANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLN
... :::. ::.. : ...: ::: .: : .::: . .:: . : ::::
XP_016 SQGP--YSSAPPLSH-TPSSDFQPPYFPPPYQPLP-YHQS---QDPYSH---VNDPYSLN
90 100 110 120 130
100 110 120 130 140
pF1KB5 SLHHSQQY----YQQIHHG-EPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSLM
::. ::. :. . : : ... : . : :: .: . :: :. :
XP_016 PLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRD----YHSVRRPDVLLH
140 150 160 170 180 190
150 160 170 180 190
pF1KB5 S--HGSQYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQ-CGLVLNGQGGVIRR------
: :: . :: . : ::. : .:.:. .:. :. : :. ::..
XP_016 SAHHGLDAGMGDSLSLH-----GLGHPGMEDVQSVEDANNSGMNLLDQS-VIKKVPVPPK
200 210 220 230 240
200 210 220 230 240
pF1KB5 ----------G--GTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNAS
: : :: ..::::::::::::::::::::..::.::::::::::::
XP_016 SVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNAS
250 260 270 280 290 300
250 260 270 280 290 300
pF1KB5 LLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYT
::::.::::::::::: :::.:...:::::::::::::::::::::::::.::::::::
XP_016 LLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYI
310 320 330 340 350 360
310 320 330 340 350 360
pF1KB5 CETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPI
::::::::::.:.: ::: . .. .::.:.:::::.:::: :::.:::.:.:.:::.::
XP_016 CETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPI
370 380 390 400 410 420
370 380 390 400 410 420
pF1KB5 LDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEK---HTTHKNGGAADSG
:. :: ::::::::::::.:::::::...:. :.: :. ..: ..: : .. :
XP_016 LEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEG
430 440 450 460 470 480
430 440 450
pF1KB5 QGHANSEKAPLRKTSEAAVKEGKTEKTD
: ...:
XP_016 PGSKTGDKEEKHRK
490 500
>>XP_016866722 (OMIM: 169100,601601,617035) PREDICTED: t (515 aa)
initn: 1179 init1: 1049 opt: 1104 Z-score: 1257.1 bits: 242.0 E(85289): 2.8e-63
Smith-Waterman score: 1211; 50.9% identity (68.8% similar) in 458 aa overlap (8-432:75-509)
10 20 30
pF1KB5 MSTTFPGLVH--DAEIRHDG--SNSYRLMQLGCLESV
::: .. :::: :.: :: ::: ::
XP_016 GSLWRMSSTKISMSTQGDQVLRIREVSLQMLVHTYSSMDRHDGVPSHSSRLSQLG---SV
50 60 70 80 90 100
40 50 60 70 80 90
pF1KB5 ANSTVAYSSSSPLTYSTTGTEFASPYFSTNHQYTPLHHQSFHYEFQHSHPAVTPDAYSLN
... :::. ::.. : ...: ::: .: : .::: . .:: . : ::::
XP_016 SQGP--YSSAPPLSH-TPSSDFQPPYFPPPYQPLP-YHQS---QDPYSH---VNDPYSLN
110 120 130 140 150
100 110 120 130 140
pF1KB5 SLHHSQQY----YQQIHHG-EPTDFINLHNARALKSSCLDEQRRELGCLDAYRRHDLSLM
::. ::. :. . : : ... : . : :: .: . :: :. :
XP_016 PLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRD----YHSVRRPDVLLH
160 170 180 190 200
150 160 170 180 190
pF1KB5 S--HGSQYGMHPDQRLLPGPSLGLAAAGADDLQGSVEAQ-CGLVLNGQGGVIRR------
: :: . :: . : ::. : .:.:. .:. :. : :. ::..
XP_016 SAHHGLDAGMGDSLSLH-----GLGHPGMEDVQSVEDANNSGMNLLDQS-VIKKVPVPPK
210 220 230 240 250 260
200 210 220 230 240
pF1KB5 ----------G--GTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNAS
: : :: ..::::::::::::::::::::..::.::::::::::::
XP_016 SVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNAS
270 280 290 300 310 320
250 260 270 280 290 300
pF1KB5 LLGGILRRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYT
::::.::::::::::: :::.:...:::::::::::::::::::::::::.::::::::
XP_016 LLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYI
330 340 350 360 370 380
310 320 330 340 350 360
pF1KB5 CETEFPAKAVGEHLARQHMEQKEQTARKKMILATKQICKEFQDLLSQDRSPLGSSRPTPI
::::::::::.:.: ::: . .. .::.:.:::::.:::: :::.:::.:.:.:::.::
XP_016 CETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPI
390 400 410 420 430 440
370 380 390 400 410 420
pF1KB5 LDLDIQRHLTHFSLITHGFGTPAICAALSTFQTVLSEMLNYLEK---HTTHKNGGAADSG
:. :: ::::::::::::.:::::::...:. :.: :. ..: ..: : .. :
XP_016 LEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEG
450 460 470 480 490 500
430 440 450
pF1KB5 QGHANSEKAPLRKTSEAAVKEGKTEKTD
: ...:
XP_016 PGSKTGDKEEKHRK
510
452 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 03:09:47 2016 done: Sun Nov 6 03:09:48 2016
Total Scan time: 9.830 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]