FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5753, 756 aa
  1>>>pF1KB5753 756 - 756 aa - 756 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.5923+/-0.000485; mu= 0.5372+/- 0.030
 mean_var=234.1487+/-47.126, 0's: 0 Z-trim(116.2): 21  B-trim: 401 in 1/57
 Lambda= 0.083816
 statistics sampled from 27239 (27253) to 27239 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.32), width:  16
 Scan time: 11.530

The best scores are:                                      opt bits E(85289)
NP_055412 (OMIM: 611199) deoxynucleotidyltransfera ( 756) 4816 596.2 1.6e-169


>>NP_055412 (OMIM: 611199) deoxynucleotidyltransferase t  (756 aa)
 initn: 4816 init1: 4816 opt: 4816  Z-score: 3164.3  bits: 596.2 E(85289): 1.6e-169
Smith-Waterman score: 4816; 99.9% identity (100.0% similar) in 756 aa overlap (1-756:1-756)

               10        20        30        40        50        60
pF1KB5 MVVTRSARAKASIQAASAESSGQKSFAANGIQAHPESSTGSDARTTAESQTTGKQSLIPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MVVTRSARAKASIQAASAESSGQKSFAANGIQAHPESSTGSDARTTAESQTTGKQSLIPR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TPKARKRKSRTTGSLPKGTEPSTDGETSEAESNYSVSEHHDTILRVTRRRQILIACSPVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TPKARKRKSRTTGSLPKGTEPSTDGETSEAESNYSVSEHHDTILRVTRRRQILIACSPVS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 SVRKKPKVTPTKESYTEEIVSEAESHVSGISRIVLPTEKTTGARRSKAKSLTDPSQESHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SVRKKPKVTPTKESYTEEIVSEAESHVSGISRIVLPTEKTTGARRSKAKSLTDPSQESHT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 EAISDAETSSSDISFSGIATRRTRSMQRKLKAQTEKKDSKIVPGNEKQIVGTPVNSEDSD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EAISDAETSSSDISFSGIATRRTRSMQRKLKAQTEKKDSKIVPGNEKQIVGTPVNSEDSD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 TRQTSHLQARSLSEINKPNFYNNDFDDDFSHRSSENILTVHEQANVESLKETKQNCKDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TRQTSHLQARSLSEINKPNFYNNDFDDDFSHRSSENILTVHEQANVESLKETKQNCKDLD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 EDANGITDDGKEINEKSSQLKNLSELQDTSLQQLVSQRHSTPQNKNAVSVHSNLNSEAVM
       ::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EDANGITDEGKEINEKSSQLKNLSELQDTSLQQLVSQRHSTPQNKNAVSVHSNLNSEAVM
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 KSLTQTFATVEVGRWNNNKKSPIKASDLTKFGDCGGSDDEEESTVISVSEDMNSEGNVDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KSLTQTFATVEVGRWNNNKKSPIKASDLTKFGDCGGSDDEEESTVISVSEDMNSEGNVDF
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 ECDTKLYTSAPNTSQGKDNSVLLVLSSDESQQSENSENEEDTLCFVENSGQRESLSGDTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ECDTKLYTSAPNTSQGKDNSVLLVLSSDESQQSENSENEEDTLCFVENSGQRESLSGDTG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 SLSCDNALFVIDTTPGMSADKNFYLEEEDKASEVAIEEEKEEEEDEKSEEDSSDHDENED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SLSCDNALFVIDTTPGMSADKNFYLEEEDKASEVAIEEEKEEEEDEKSEEDSSDHDENED
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 EFSDEEDFLNSTKAKLLKLTSSSIDPGLSIKQLGGLYINFNADKLQSNKRTLTQIKEKKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EFSDEEDFLNSTKAKLLKLTSSSIDPGLSIKQLGGLYINFNADKLQSNKRTLTQIKEKKK
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB5 NELLQKAVITPDFEKNHCVPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 NELLQKAVITPDFEKNHCVPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKND
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB5 LKALKMRASMDPKRFYKKNDRDGFPKYFQIGTIVDNPADFYHSRIPKKQRKRTIVEELLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LKALKMRASMDPKRFYKKNDRDGFPKYFQIGTIVDNPADFYHSRIPKKQRKRTIVEELLA
              670       680       690       700       710       720

              730       740       750      
pF1KB5 DSEFRRYNRRKYSEIMAEKAANAAGKKFRKKKKFRN
       ::::::::::::::::::::::::::::::::::::
NP_055 DSEFRRYNRRKYSEIMAEKAANAAGKKFRKKKKFRN
              730       740       750      




756 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 10:48:32 2016 done: Sun Nov  6 10:48:34 2016
 Total Scan time: 11.530 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]