Result of FASTA (omim) for
pFN21AB5686
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5686, 480 aa
1>>>pF1KB5686 480 - 480 aa - 480 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6287+/-0.000365; mu= 17.0759+/- 0.023
mean_var=83.0080+/-16.219, 0's: 0 Z-trim(115.3): 105 B-trim: 0 in 0/53
Lambda= 0.140771
statistics sampled from 25631 (25742) to 25631 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.302), width: 16
Scan time: 7.140
The best scores are: opt bits E(85289)
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A ( 480) 3231 666.0 6.3e-191
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453) 3026 624.4 2e-178
NP_001273445 (OMIM: 608382) dnaJ homolog subfamily ( 300) 1771 369.4 7.8e-102
NP_001128477 (OMIM: 611328) dnaJ homolog subfamily ( 420) 428 96.7 1.3e-19
XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolo ( 420) 428 96.7 1.3e-19
NP_001128476 (OMIM: 611328) dnaJ homolog subfamily ( 462) 428 96.8 1.4e-19
XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 416 94.2 6.1e-19
XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348) 416 94.2 6.1e-19
NP_036398 (OMIM: 611328) dnaJ homolog subfamily B ( 348) 416 94.2 6.1e-19
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A ( 412) 416 94.3 7e-19
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B ( 340) 378 86.5 1.3e-16
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337) 345 79.8 1.3e-14
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B ( 337) 345 79.8 1.3e-14
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241) 338 78.3 2.7e-14
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257) 338 78.3 2.8e-14
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326) 338 78.4 3.4e-14
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 338 78.4 3.5e-14
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 338 78.4 3.5e-14
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334) 338 78.4 3.5e-14
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211) 331 76.8 6.4e-14
NP_057390 (OMIM: 611341) dnaJ homolog subfamily B ( 358) 329 76.6 1.3e-13
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A ( 397) 324 75.6 2.9e-13
NP_036460 (OMIM: 602634) dnaJ homolog subfamily B ( 223) 304 71.4 3e-12
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277) 301 70.8 5.5e-12
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324) 301 70.9 6.2e-12
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B ( 309) 296 69.8 1.2e-11
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B ( 232) 287 67.9 3.4e-11
XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolo ( 232) 287 67.9 3.4e-11
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316) 282 67.0 8.8e-11
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B ( 409) 281 66.9 1.2e-10
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409) 281 66.9 1.2e-10
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409) 281 66.9 1.2e-10
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411) 281 66.9 1.2e-10
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily ( 77) 262 62.5 4.8e-10
XP_011527351 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198) 251 60.6 4.8e-09
XP_011527350 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198) 251 60.6 4.8e-09
NP_079495 (OMIM: 611203) dnaJ homolog subfamily C ( 198) 251 60.6 4.8e-09
NP_001258510 (OMIM: 607987) dnaJ homolog subfamily ( 747) 257 62.2 5.9e-09
NP_061854 (OMIM: 607987) dnaJ homolog subfamily C ( 793) 257 62.2 6.2e-09
XP_011515922 (OMIM: 613945) PREDICTED: dnaJ homolo ( 180) 248 59.9 6.7e-09
XP_011515920 (OMIM: 613945) PREDICTED: dnaJ homolo ( 199) 248 60.0 7.3e-09
NP_149096 (OMIM: 613945) dnaJ homolog subfamily C ( 199) 248 60.0 7.3e-09
XP_016876164 (OMIM: 601184,616192) PREDICTED: dnaJ ( 383) 226 55.7 2.7e-07
XP_016876163 (OMIM: 601184,616192) PREDICTED: dnaJ ( 421) 226 55.7 2.9e-07
XP_011519407 (OMIM: 601184,616192) PREDICTED: dnaJ ( 450) 226 55.7 3.1e-07
NP_006251 (OMIM: 601184,616192) dnaJ homolog subfa ( 504) 226 55.8 3.4e-07
XP_011519406 (OMIM: 601184,616192) PREDICTED: dnaJ ( 533) 226 55.8 3.5e-07
NP_060633 (OMIM: 616844) dnaJ homolog subfamily C ( 304) 218 54.0 7e-07
NP_001012339 (OMIM: 617048,617052) dnaJ homolog su ( 531) 214 53.3 1.9e-06
XP_005248307 (OMIM: 617048,617052) PREDICTED: dnaJ ( 553) 214 53.4 2e-06
>>NP_005138 (OMIM: 608382) dnaJ homolog subfamily A memb (480 aa)
initn: 3231 init1: 3231 opt: 3231 Z-score: 3548.8 bits: 666.0 E(85289): 6.3e-191
Smith-Waterman score: 3231; 100.0% identity (100.0% similar) in 480 aa overlap (1-480:1-480)
10 20 30 40 50 60
pF1KB5 MAARCSTRWLLVVVGTPRLPAISGRGARPPREGVVGAWLSRKLSVPAFASSLTSCGPRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAARCSTRWLLVVVGTPRLPAISGRGARPPREGVVGAWLSRKLSVPAFASSLTSCGPRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKGGPTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 HPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKGGPTV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRRDGADIHSDLFISIAQALLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRRDGADIHSDLFISIAQALLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GTARAQGLYETINVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GTARAQGLYETINVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 QSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAGEDEEGFLSKLKKMFTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 QSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAGEDEEGFLSKLKKMFTS
430 440 450 460 470 480
>>NP_001128582 (OMIM: 608382) dnaJ homolog subfamily A m (453 aa)
initn: 3026 init1: 3026 opt: 3026 Z-score: 3324.1 bits: 624.4 E(85289): 2e-178
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)
10 20 30 40 50 60
pF1KB5 MAARCSTRWLLVVVGTPRLPAISGRGARPPREGVVGAWLSRKLSVPAFASSLTSCGPRAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAARCSTRWLLVVVGTPRLPAISGRGARPPREGVVGAWLSRKLSVPAFASSLTSCGPRAL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 LTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 HPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKGGPTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKGGPTV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 DPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 GKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 KKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRRDGADIHSDLFISIAQALLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRRDGADIHSDLFISIAQALLG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 GTARAQGLYETINVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTARAQGLYETINVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 QSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAGEDEEGFLSKLKKMFTS
:::::::::::::::::::::::::::
NP_001 QSLILSYAEDETDVEGTVNGVTLTSSGKRSTGN
430 440 450
>>NP_001273445 (OMIM: 608382) dnaJ homolog subfamily A m (300 aa)
initn: 1771 init1: 1771 opt: 1771 Z-score: 1949.2 bits: 369.4 E(85289): 7.8e-102
Smith-Waterman score: 1771; 99.6% identity (100.0% similar) in 262 aa overlap (186-447:33-294)
160 170 180 190 200 210
pF1KB5 AYGSAGFDPGASGSQHSYWKGGPTVDPEELFRKIFGEFSSSSFGDFQTVFDQPQEYFMEL
.:::::::::::::::::::::::::::::
NP_001 EPQAERPRLCVFPDLLRPPSAADIETWCQPYRKIFGEFSSSSFGDFQTVFDQPQEYFMEL
10 20 30 40 50 60
220 230 240 250 260 270
pF1KB5 TFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTC
70 80 90 100 110 120
280 290 300 310 320 330
pF1KB5 RRCGGRGSIIISPCVVCRGAGQAKQKKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRCGGRGSIIISPCVVCRGAGQAKQKKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQK
130 140 150 160 170 180
340 350 360 370 380 390
pF1KB5 SPVFRRDGADIHSDLFISIAQALLGGTARAQGLYETINVTIPPGTQTDQKIRMGGKGIPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SPVFRRDGADIHSDLFISIAQALLGGTARAQGLYETINVTIPPGTQTDQKIRMGGKGIPR
190 200 210 220 230 240
400 410 420 430 440 450
pF1KB5 INSYGYGDHYIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 INSYGYGDHYIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGKRSTGN
250 260 270 280 290 300
460 470 480
pF1KB5 GSKARREAGEDEEGFLSKLKKMFTS
>>NP_001128477 (OMIM: 611328) dnaJ homolog subfamily B m (420 aa)
initn: 353 init1: 162 opt: 428 Z-score: 473.0 bits: 96.7 E(85289): 1.3e-19
Smith-Waterman score: 445; 30.9% identity (54.3% similar) in 392 aa overlap (61-424:42-413)
40 50 60 70 80
pF1KB5 REGVVGAWLSRKLSVPAFASSLTSCGPRALLTLRPGVSLTGTKHNPFICTASFHTSA-PL
. :.: ..: . : :. . .::: :.
NP_001 PAAPPLQARGAFRSFPHSWGEDFLASLMFKIQLEP-LKLRAWTLNGFVKFRNKETSAGPV
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB5 A--KEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSD
: .:::.:::.: .:.. :::::: ..: ::::: ::. :.:.:::...::::.::::
NP_001 AVMGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKE-PNAEEKFKEIAEAYDVLSD
80 90 100 110 120
150 160 170 180 190 200
pF1KB5 EVKRKQYDAYGSAGFDPG------ASGSQHSYWKGGPTVDPEELFRKIFGEFSSSSFGDF
:: :: :: :. : .::: : ..: ::. : ..:: .:. : :
NP_001 PKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHG----DPHATFASFFG--GSNPFDIF
130 140 150 160 170 180
210 220 230 240 250
pF1KB5 --QTVFDQPQEYF----MELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQH---
.. .: : :.. .. :. .: : .. : . : :::
NP_001 FASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPV
190 200 210 220 230 240
260 270 280 290 300
pF1KB5 CHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-----ISPCVVCRGAGQAKQKKRVMIP
: : : . . :. : :: . : . : :. :: :. .. .:
NP_001 VHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGW---KEGTKITFP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 VPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRRDGADIHSDLFISIAQALLGGTARAQG
. :. .:. .: .... . :::::... . .::. .:: : :.
NP_001 KEG---DATPDNIPA---DIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPT
310 320 330 340 350
370 380 390 400 410 420
pF1KB5 LYETI-----NVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQQS
. . : .: ::: ...: : .:.. . :: ...:.: : ::: . ..
NP_001 IDGRVIPLPCNDVIKPGTV--KRLRGEGLPFPKVPTQ-RGDLIVEFKVRFPDRLTPQTRQ
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 LILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAGEDEEGFLSKLKKMFTS
..
NP_001 ILKQHLPCS
420
>>XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolog su (420 aa)
initn: 353 init1: 162 opt: 428 Z-score: 473.0 bits: 96.7 E(85289): 1.3e-19
Smith-Waterman score: 445; 30.9% identity (54.3% similar) in 392 aa overlap (61-424:42-413)
40 50 60 70 80
pF1KB5 REGVVGAWLSRKLSVPAFASSLTSCGPRALLTLRPGVSLTGTKHNPFICTASFHTSA-PL
. :.: ..: . : :. . .::: :.
XP_011 PAAPPLQARGAFRSFPHSWGEDFLASLMFKIQLEP-LKLRAWTLNGFVKFRNKETSAGPV
20 30 40 50 60 70
90 100 110 120 130 140
pF1KB5 A--KEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSD
: .:::.:::.: .:.. :::::: ..: ::::: ::. :.:.:::...::::.::::
XP_011 AVMGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKE-PNAEEKFKEIAEAYDVLSD
80 90 100 110 120
150 160 170 180 190 200
pF1KB5 EVKRKQYDAYGSAGFDPG------ASGSQHSYWKGGPTVDPEELFRKIFGEFSSSSFGDF
:: :: :: :. : .::: : ..: ::. : ..:: .:. : :
XP_011 PKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHG----DPHATFASFFG--GSNPFDIF
130 140 150 160 170 180
210 220 230 240 250
pF1KB5 --QTVFDQPQEYF----MELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQH---
.. .: : :.. .. :. .: : .. : . : :::
XP_011 FASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPV
190 200 210 220 230 240
260 270 280 290 300
pF1KB5 CHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-----ISPCVVCRGAGQAKQKKRVMIP
: : : . . :. : :: . : . : :. :: :. .. .:
XP_011 VHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGW---KEGTKITFP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 VPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRRDGADIHSDLFISIAQALLGGTARAQG
. :. .:. .: .... . :::::... . .::. .:: : :.
XP_011 KEG---DATPDNIPA---DIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPT
310 320 330 340 350
370 380 390 400 410 420
pF1KB5 LYETI-----NVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQQS
. . : .: ::: ...: : .:.. . :: ...:.: : ::: . ..
XP_011 IDGRVIPLPCNDVIKPGTV--KRLRGEGLPFPKVPTQ-RGDLIVEFKVRFPDRLTPQTRQ
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB5 LILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAGEDEEGFLSKLKKMFTS
..
XP_011 ILKQHLPCS
420
>>NP_001128476 (OMIM: 611328) dnaJ homolog subfamily B m (462 aa)
initn: 376 init1: 162 opt: 428 Z-score: 472.5 bits: 96.8 E(85289): 1.4e-19
Smith-Waterman score: 445; 30.9% identity (54.3% similar) in 392 aa overlap (61-424:84-455)
40 50 60 70 80
pF1KB5 REGVVGAWLSRKLSVPAFASSLTSCGPRALLTLRPGVSLTGTKHNPFICTASFHTSA-PL
. :.: ..: . : :. . .::: :.
NP_001 TAAPPLQARGAFRSFPHSWGEDFLASLMFKIQLEP-LKLRAWTLNGFVKFRNKETSAGPV
60 70 80 90 100 110
90 100 110 120 130 140
pF1KB5 A--KEDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSD
: .:::.:::.: .:.. :::::: ..: ::::: ::. :.:.:::...::::.::::
NP_001 AVMGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKE-PNAEEKFKEIAEAYDVLSD
120 130 140 150 160 170
150 160 170 180 190 200
pF1KB5 EVKRKQYDAYGSAGFDPG------ASGSQHSYWKGGPTVDPEELFRKIFGEFSSSSFGDF
:: :: :: :. : .::: : ..: ::. : ..:: .:. : :
NP_001 PKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHG----DPHATFASFFG--GSNPFDIF
180 190 200 210 220
210 220 230 240 250
pF1KB5 --QTVFDQPQEYF----MELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQH---
.. .: : :.. .. :. .: : .. : . : :::
NP_001 FASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPV
230 240 250 260 270 280
260 270 280 290 300
pF1KB5 CHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-----ISPCVVCRGAGQAKQKKRVMIP
: : : . . :. : :: . : . : :. :: :. .. .:
NP_001 VHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGW---KEGTKITFP
290 300 310 320 330 340
310 320 330 340 350 360
pF1KB5 VPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRRDGADIHSDLFISIAQALLGGTARAQG
. :. .:. .: .... . :::::... . .::. .:: : :.
NP_001 KEG---DATPDNIPA---DIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPT
350 360 370 380 390
370 380 390 400 410 420
pF1KB5 LYETI-----NVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQQS
. . : .: ::: ...: : .:.. . :: ...:.: : ::: . ..
NP_001 IDGRVIPLPCNDVIKPGTV--KRLRGEGLPFPKVPTQ-RGDLIVEFKVRFPDRLTPQTRQ
400 410 420 430 440 450
430 440 450 460 470 480
pF1KB5 LILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAGSKARREAGEDEEGFLSKLKKMFTS
..
NP_001 ILKQHLPCS
460
>>XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolog su (348 aa)
initn: 353 init1: 162 opt: 416 Z-score: 461.0 bits: 94.2 E(85289): 6.1e-19
Smith-Waterman score: 433; 31.3% identity (54.2% similar) in 358 aa overlap (92-424:3-341)
70 80 90 100 110 120
pF1KB5 TLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKYH
.:::.:::.: .:.. :::::: ..: :::
XP_005 MGKDYYKILGIPSGANEDEIKKAYRKMALKYH
10 20 30
130 140 150 160 170
pF1KB5 PDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPG------ASGSQHSYWK
:: ::. :.:.:::...::::.:::: :: :: :: :. : .::: : ..
XP_005 PDKNKE-PNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFH
40 50 60 70 80 90
180 190 200 210 220
pF1KB5 GGPTVDPEELFRKIFGEFSSSSFGDF--QTVFDQPQEYF----MELTFNQAAKGVNKEFT
: ::. : ..:: .:. : : .. .: : :.. .. :. .:
XP_005 G----DPHATFASFFG--GSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFG
100 110 120 130 140
230 240 250 260 270 280
pF1KB5 VNIMDTCERCNGKGNEPGTKVQH---CHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-
: .. : . : ::: : : : . . :. : :: . : .
XP_005 FNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVR
150 160 170 180 190 200
290 300 310 320 330 340
pF1KB5 ----ISPCVVCRGAGQAKQKKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRR
: :. :: :. .. .: : :. .:. .: .... . :::
XP_005 TEDKILHIVIKRGW---KEGTKITFP-KEG--DATPDNIPA---DIVFVLKDKPHAHFRR
210 220 230 240 250
350 360 370 380 390
pF1KB5 DGADIHSDLFISIAQALLGGTARAQGLYETI-----NVTIPPGTQTDQKIRMGGKGIPRI
::... . .::. .:: : :. . . : .: ::: ...: : .:..
XP_005 DGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTV--KRLRGEGLPFPKV
260 270 280 290 300 310
400 410 420 430 440 450
pF1KB5 NSYGYGDHYIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAG
. :: ...:.: : ::: . ....
XP_005 PTQ-RGDLIVEFKVRFPDRLTPQTRQILKQHLPCS
320 330 340
>>XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolog su (348 aa)
initn: 353 init1: 162 opt: 416 Z-score: 461.0 bits: 94.2 E(85289): 6.1e-19
Smith-Waterman score: 433; 31.3% identity (54.2% similar) in 358 aa overlap (92-424:3-341)
70 80 90 100 110 120
pF1KB5 TLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKYH
.:::.:::.: .:.. :::::: ..: :::
XP_006 MGKDYYKILGIPSGANEDEIKKAYRKMALKYH
10 20 30
130 140 150 160 170
pF1KB5 PDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPG------ASGSQHSYWK
:: ::. :.:.:::...::::.:::: :: :: :: :. : .::: : ..
XP_006 PDKNKE-PNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFH
40 50 60 70 80 90
180 190 200 210 220
pF1KB5 GGPTVDPEELFRKIFGEFSSSSFGDF--QTVFDQPQEYF----MELTFNQAAKGVNKEFT
: ::. : ..:: .:. : : .. .: : :.. .. :. .:
XP_006 G----DPHATFASFFG--GSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFG
100 110 120 130 140
230 240 250 260 270 280
pF1KB5 VNIMDTCERCNGKGNEPGTKVQH---CHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-
: .. : . : ::: : : : . . :. : :: . : .
XP_006 FNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVR
150 160 170 180 190 200
290 300 310 320 330 340
pF1KB5 ----ISPCVVCRGAGQAKQKKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRR
: :. :: :. .. .: : :. .:. .: .... . :::
XP_006 TEDKILHIVIKRGW---KEGTKITFP-KEG--DATPDNIPA---DIVFVLKDKPHAHFRR
210 220 230 240 250
350 360 370 380 390
pF1KB5 DGADIHSDLFISIAQALLGGTARAQGLYETI-----NVTIPPGTQTDQKIRMGGKGIPRI
::... . .::. .:: : :. . . : .: ::: ...: : .:..
XP_006 DGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTV--KRLRGEGLPFPKV
260 270 280 290 300 310
400 410 420 430 440 450
pF1KB5 NSYGYGDHYIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAG
. :: ...:.: : ::: . ....
XP_006 PTQ-RGDLIVEFKVRFPDRLTPQTRQILKQHLPCS
320 330 340
>>NP_036398 (OMIM: 611328) dnaJ homolog subfamily B memb (348 aa)
initn: 353 init1: 162 opt: 416 Z-score: 461.0 bits: 94.2 E(85289): 6.1e-19
Smith-Waterman score: 433; 31.3% identity (54.2% similar) in 358 aa overlap (92-424:3-341)
70 80 90 100 110 120
pF1KB5 TLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQLAKKYH
.:::.:::.: .:.. :::::: ..: :::
NP_036 MGKDYYKILGIPSGANEDEIKKAYRKMALKYH
10 20 30
130 140 150 160 170
pF1KB5 PDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPG------ASGSQHSYWK
:: ::. :.:.:::...::::.:::: :: :: :: :. : .::: : ..
NP_036 PDKNKE-PNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFH
40 50 60 70 80 90
180 190 200 210 220
pF1KB5 GGPTVDPEELFRKIFGEFSSSSFGDF--QTVFDQPQEYF----MELTFNQAAKGVNKEFT
: ::. : ..:: .:. : : .. .: : :.. .. :. .:
NP_036 G----DPHATFASFFG--GSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFG
100 110 120 130 140
230 240 250 260 270 280
pF1KB5 VNIMDTCERCNGKGNEPGTKVQH---CHYCGGSGMETINTGPFVMRSTCRRCGGRGSII-
: .. : . : ::: : : : . . :. : :: . : .
NP_036 FNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVR
150 160 170 180 190 200
290 300 310 320 330 340
pF1KB5 ----ISPCVVCRGAGQAKQKKRVMIPVPAGVEDGQTVRMPVGKREIFITFRVQKSPVFRR
: :. :: :. .. .: : :. .:. .: .... . :::
NP_036 TEDKILHIVIKRGW---KEGTKITFP-KEG--DATPDNIPA---DIVFVLKDKPHAHFRR
210 220 230 240 250
350 360 370 380 390
pF1KB5 DGADIHSDLFISIAQALLGGTARAQGLYETI-----NVTIPPGTQTDQKIRMGGKGIPRI
::... . .::. .:: : :. . . : .: ::: ...: : .:..
NP_036 DGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKPGTV--KRLRGEGLPFPKV
260 270 280 290 300 310
400 410 420 430 440 450
pF1KB5 NSYGYGDHYIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVTLTSSGGSTMDSSAG
. :: ...:.: : ::: . ....
NP_036 PTQ-RGDLIVEFKVRFPDRLTPQTRQILKQHLPCS
320 330 340
>>NP_005871 (OMIM: 611322) dnaJ homolog subfamily A memb (412 aa)
initn: 341 init1: 136 opt: 416 Z-score: 460.0 bits: 94.3 E(85289): 7e-19
Smith-Waterman score: 509; 31.7% identity (55.8% similar) in 416 aa overlap (87-466:2-393)
60 70 80 90 100 110
pF1KB5 PRALLTLRPGVSLTGTKHNPFICTASFHTSAPLAKEDYYQILGVPRNASQKEIKKAYYQL
: .: :.::::: .::..:.:::: .:
NP_005 MANVADTKLYDILGVPPGASENELKKAYRKL
10 20 30
120 130 140 150 160 170
pF1KB5 AKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASGSQHSYWKG
::.:::: : :.: .::.... ::::::. ::. :: :: :. :..: :
NP_005 AKEYHPDKN---PNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGG-------G
40 50 60 70 80
180 190 200 210 220
pF1KB5 GPTVDPEELFRKIFGE--FS-----SSSFGDFQTVFD--QPQEYFMELTFNQAAKGVNKE
: : .: .::: :. : : . . : .: . .: .: .: .. .
NP_005 GGMDD---IFSHIFGGGLFGFMGNQSRSRNGRRRGEDMMHPLKVSLEDLYN--GKTTKLQ
90 100 110 120 130
230 240 250 260 270 280
pF1KB5 FTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETI--NTGPFV---MRSTCRRCGGRG
.. :.. : :.:.:.. :. ::.: : : :.. . . .: . :.:.: :.:.:
NP_005 LSKNVL--CSACSGQGGKSGA-VQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNGEG
140 150 160 170 180 190
290 300 310 320 330
pF1KB5 SIIISP--CVVCRGAGQAKQKKRVMIPVPAGVEDGQTV-------RMP-VGKREIFITFR
.: : :.: :. : . . : :.. :: . . : : .: . ..
NP_005 EVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGVEPGDIVLLLQ
200 210 220 230 240 250
340 350 360 370 380
pF1KB5 VQKSPVFRRDGADIHSDLFISIAQALLGGTARAQGLY-ETINVTIPPGTQTDQK-IRM-G
.. ::.::: :.: :....:: : . : . : : ::: . .:.
NP_005 EKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVR
260 270 280 290 300 310
390 400 410 420 430 440
pF1KB5 GKGIPRI-NSYGYGDHYIHIKIRVPKR------LTSRQQSLILSYAEDETDVEGTVNGVT
:.:.:. : . :: ::.. .. :. :. ..:. : : .. : .. :
NP_005 GEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPE-VPNIIGETEEVE
320 330 340 350 360 370
450 460 470 480
pF1KB5 LTSSGGSTMDSSAGSKA--RREAGEDEEGFLSKLKKMFTS
: . .::. :: . :::: .:
NP_005 L-----QEFDSTRGSGGGQRREAYNDSSDEESSSHHGPGVQCAHQ
380 390 400 410
480 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 04:05:04 2016 done: Mon Nov 7 04:05:05 2016
Total Scan time: 7.140 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]