Result of FASTA (omim) for
pFN21AB5020
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5020, 555 aa
1>>>pF1KB5020 555 - 555 aa - 555 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4394+/-0.000412; mu= 18.1541+/- 0.025
mean_var=73.4853+/-15.062, 0's: 0 Z-trim(111.6): 55 B-trim: 223 in 1/51
Lambda= 0.149615
statistics sampled from 20181 (20220) to 20181 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.607), E-opt: 0.2 (0.237), width: 16
Scan time: 8.670
The best scores are: opt bits E(85289)
NP_001970 (OMIM: 132811,143890) bifunctional epoxi ( 555) 3777 825.1 0
NP_001243411 (OMIM: 132811,143890) bifunctional ep ( 502) 3440 752.3 8.2e-217
NP_001243413 (OMIM: 132811,143890) bifunctional ep ( 502) 3440 752.3 8.2e-217
NP_001243412 (OMIM: 132811,143890) bifunctional ep ( 489) 3351 733.1 4.9e-211
XP_016868688 (OMIM: 132811,143890) PREDICTED: bifu ( 514) 2353 517.7 3.6e-146
XP_016868689 (OMIM: 132811,143890) PREDICTED: bifu ( 300) 1606 356.3 7.9e-98
NP_079523 (OMIM: 611181) acyl-CoA dehydrogenase fa (1059) 322 79.5 5.9e-14
NP_001130010 (OMIM: 611181) acyl-CoA dehydrogenase (1090) 270 68.3 1.5e-10
NP_001240830 (OMIM: 601029) mesoderm-specific tran ( 292) 148 41.6 0.0042
NP_001240831 (OMIM: 601029) mesoderm-specific tran ( 292) 148 41.6 0.0042
XP_011514524 (OMIM: 601029) PREDICTED: mesoderm-sp ( 301) 148 41.6 0.0043
XP_016867707 (OMIM: 601029) PREDICTED: mesoderm-sp ( 326) 148 41.6 0.0046
NP_803490 (OMIM: 601029) mesoderm-specific transcr ( 326) 148 41.6 0.0046
NP_803491 (OMIM: 601029) mesoderm-specific transcr ( 326) 148 41.6 0.0046
NP_002393 (OMIM: 601029) mesoderm-specific transcr ( 335) 148 41.6 0.0047
NP_001240829 (OMIM: 601029) mesoderm-specific tran ( 321) 143 40.5 0.0096
>>NP_001970 (OMIM: 132811,143890) bifunctional epoxide h (555 aa)
initn: 3777 init1: 3777 opt: 3777 Z-score: 4406.0 bits: 825.1 E(85289): 0
Smith-Waterman score: 3777; 100.0% identity (100.0% similar) in 555 aa overlap (1-555:1-555)
10 20 30 40 50 60
pF1KB5 MTLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 APPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 PFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMH
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 KVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB5 GRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIK
490 500 510 520 530 540
550
pF1KB5 WLDSDARNPPVVSKM
:::::::::::::::
NP_001 WLDSDARNPPVVSKM
550
>>NP_001243411 (OMIM: 132811,143890) bifunctional epoxid (502 aa)
initn: 3440 init1: 3440 opt: 3440 Z-score: 4013.5 bits: 752.3 E(85289): 8.2e-217
Smith-Waterman score: 3440; 100.0% identity (100.0% similar) in 502 aa overlap (54-555:1-502)
30 40 50 60 70 80
pF1KB5 GRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLP
::::::::::::::::::::::::::::::
NP_001 MKGEITLSQWIPLMEENCRKCSETAKVCLP
10 20 30
90 100 110 120 130 140
pF1KB5 KNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCEL
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB5 KMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB5 QDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCL
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB5 CHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDK
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB5 LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDY
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB5 QLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVT
340 350 360 370 380 390
450 460 470 480 490 500
pF1KB5 EEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQM
400 410 420 430 440 450
510 520 530 540 550
pF1KB5 SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVSKM
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVSKM
460 470 480 490 500
>>NP_001243413 (OMIM: 132811,143890) bifunctional epoxid (502 aa)
initn: 3440 init1: 3440 opt: 3440 Z-score: 4013.5 bits: 752.3 E(85289): 8.2e-217
Smith-Waterman score: 3440; 100.0% identity (100.0% similar) in 502 aa overlap (54-555:1-502)
30 40 50 60 70 80
pF1KB5 GRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLP
::::::::::::::::::::::::::::::
NP_001 MKGEITLSQWIPLMEENCRKCSETAKVCLP
10 20 30
90 100 110 120 130 140
pF1KB5 KNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCEL
40 50 60 70 80 90
150 160 170 180 190 200
pF1KB5 KMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV
100 110 120 130 140 150
210 220 230 240 250 260
pF1KB5 QDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCL
160 170 180 190 200 210
270 280 290 300 310 320
pF1KB5 CHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDK
220 230 240 250 260 270
330 340 350 360 370 380
pF1KB5 LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDY
280 290 300 310 320 330
390 400 410 420 430 440
pF1KB5 QLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVT
340 350 360 370 380 390
450 460 470 480 490 500
pF1KB5 EEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQM
400 410 420 430 440 450
510 520 530 540 550
pF1KB5 SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVSKM
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVSKM
460 470 480 490 500
>>NP_001243412 (OMIM: 132811,143890) bifunctional epoxid (489 aa)
initn: 3351 init1: 3351 opt: 3351 Z-score: 3909.8 bits: 733.1 E(85289): 4.9e-211
Smith-Waterman score: 3351; 100.0% identity (100.0% similar) in 489 aa overlap (67-555:1-489)
40 50 60 70 80 90
pF1KB5 LNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAI
::::::::::::::::::::::::::::::
NP_001 MEENCRKCSETAKVCLPKNFSIKEIFDKAI
10 20 30
100 110 120 130 140 150
pF1KB5 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQV
40 50 60 70 80 90
160 170 180 190 200 210
pF1KB5 GMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKV
100 110 120 130 140 150
220 230 240 250 260 270
pF1KB5 TGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRY
160 170 180 190 200 210
280 290 300 310 320 330
pF1KB5 QIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDW
220 230 240 250 260 270
340 350 360 370 380 390
pF1KB5 GGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAE
280 290 300 310 320 330
400 410 420 430 440 450
pF1KB5 LEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKK
340 350 360 370 380 390
460 470 480 490 500 510
pF1KB5 SGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKR
400 410 420 430 440 450
520 530 540 550
pF1KB5 GHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVSKM
:::::::::::::::::::::::::::::::::::::::
NP_001 GHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVSKM
460 470 480
>>XP_016868688 (OMIM: 132811,143890) PREDICTED: bifuncti (514 aa)
initn: 2347 init1: 2347 opt: 2353 Z-score: 2745.3 bits: 517.7 E(85289): 3.6e-146
Smith-Waterman score: 3433; 92.6% identity (92.6% similar) in 555 aa overlap (1-555:1-514)
10 20 30 40 50 60
pF1KB5 MTLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE-
130 140 150 160 170
190 200 210 220 230 240
pF1KB5 VFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHG
::::::::::::::::::::
XP_016 ----------------------------------------LLNTPAPLPTSCNPSDMSHG
180 190
250 260 270 280 290 300
pF1KB5 YVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESS
200 210 220 230 240 250
310 320 330 340 350 360
pF1KB5 APPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT
260 270 280 290 300 310
370 380 390 400 410 420
pF1KB5 PFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMH
320 330 340 350 360 370
430 440 450 460 470 480
pF1KB5 KVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSL
380 390 400 410 420 430
490 500 510 520 530 540
pF1KB5 GRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIK
440 450 460 470 480 490
550
pF1KB5 WLDSDARNPPVVSKM
:::::::::::::::
XP_016 WLDSDARNPPVVSKM
500 510
>>XP_016868689 (OMIM: 132811,143890) PREDICTED: bifuncti (300 aa)
initn: 1606 init1: 1606 opt: 1606 Z-score: 1877.3 bits: 356.3 E(85289): 7.9e-98
Smith-Waterman score: 1606; 100.0% identity (100.0% similar) in 245 aa overlap (1-245:1-245)
10 20 30 40 50 60
pF1KB5 MTLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 ILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 VFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 YVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESS
:::::
XP_016 YVTVKGYHKAKATHRGPWLVAWLRHLTWLADTEQGFSTSSWIHFGIFPHLSLASFKYERI
250 260 270 280 290 300
>>NP_079523 (OMIM: 611181) acyl-CoA dehydrogenase family (1059 aa)
initn: 306 init1: 264 opt: 322 Z-score: 371.5 bits: 79.5 E(85289): 5.9e-14
Smith-Waterman score: 418; 35.5% identity (62.9% similar) in 248 aa overlap (2-242:41-274)
10 20 30
pF1KB5 MTLRAAVFDLDGVLALPAVFGVLGRTEEALA
: ::..::. ::: .:. : .. :
NP_079 RLQWVWRTAFLKHTQRRHQGSHRWTHLGGSTYRAVIFDMGGVL-IPSPGRVAAEWEVQNR
20 30 40 50 60
40 50 60 70 80 90
pF1KB5 LPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEI
.: : . :...:: .: :.:..::: ...: : ::: :. .: . .
NP_079 IPSGTILKALMEGGENGPWMRFMRAEITAE---GFLREFGRLCSEMLKTSVP----VDSF
70 80 90 100 110 120
100 110 120 130 140
pF1KB5 FDKAISARKINR-P-MLQAALMLRKKGFTTAILTNT-WLDDRAERDGLAQLMCELKMHFD
:. : : .. : : .: ..: ::. ::.:.:. .: .. ... . .::
NP_079 FSLLTSERVAKQFPVMTEAITQIRAKGLQTAVLSNNFYLPNQ------KSFLPLDRKQFD
130 140 150 160 170
150 160 170 180 190 200
pF1KB5 FLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT
..:::. :. ::.:.:::. :. : .::: .::::.:.::: : ::. :: :.: .:
NP_079 VIVESCMEGICKPDPRIYKLCLEQLGLQPSESIFLDDLGTNLKEAARLGIHTIKVNDPET
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB5 ALKELEKVTGIQL-LNTPAPLPTSCN---PSDMSHGYVTVKPRVRLHFVELGSGPAVCLC
:.:::: . :. : ...: :.. . :.: . :.
NP_079 AVKELEALLGFTLRVGVPNTRPVKKTMEIPKDSLQKYLKDLLGIQTTGPLELLQFDHGQS
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB5 HGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL
NP_079 NPTYYIRLANRDLVLRKKPPGTLLPSAHAIEREFRIMKALANAGVPVPNVLDLCEDSSVI
300 310 320 330 340 350
>>NP_001130010 (OMIM: 611181) acyl-CoA dehydrogenase fam (1090 aa)
initn: 250 init1: 208 opt: 270 Z-score: 310.6 bits: 68.3 E(85289): 1.5e-10
Smith-Waterman score: 372; 26.4% identity (53.3% similar) in 492 aa overlap (2-483:41-485)
10 20 30
pF1KB5 MTLRAAVFDLDGVLALPAVFGVLGRTEEALA
: ::..::. ::: .:. : .. :
NP_001 RLQWVWRTAFLKHTQRRHQGSHRWTHLGGSTYRAVIFDMGGVL-IPSPGRVAAEWEVQNR
20 30 40 50 60
40 50 60 70 80 90
pF1KB5 LPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEI
.: : . :...:: .: :.:..::: ...: : ::: :. .: . .
NP_001 IPSGTILKALMEGGENGPWMRFMRAEITAE---GFLREFGRLCSEMLKTSVP----VDSF
70 80 90 100 110 120
100 110 120 130 140
pF1KB5 FDKAISARKINR-P-MLQAALMLRKKGFTTAILTNT-WLDDRAERDGLAQLMCELKMHFD
:. : : .. : : .: ..: ::. ::.:.:. .: .. ... . .::
NP_001 FSLLTSERVAKQFPVMTEAITQIRAKGLQTAVLSNNFYLPNQ------KSFLPLDRKQFD
130 140 150 160 170
150 160 170 180 190 200
pF1KB5 FLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT
..:::. :. ::.:.:::. :. : .::: .::::.:.::: : ::. :: : .
NP_001 VIVESCMEGICKPDPRIYKLCLEQLGLQPSESIFLDDLGTNLKEAARLGIHTIKRQGF-A
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB5 ALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFP
.: .: . . : . : : : ... ..:: :: . . : : :
NP_001 VLPKLVSNSWAQAIYPPYP-PKVVR-LQVNDPETAVK--------ELEALLGFTLRVGVP
240 250 260 270 280
270 280 290 300 310 320
pF1KB5 ESWYSWR-YQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLS
.. . ..:: . : :. : ....: :. .. . :. .:.
NP_001 NTRPVKKTMEIPKDSLQKY---LKDLLGI-QTTGPLELLQFDH---GQSNPTYYIRLANR
290 300 310 320 330
330 340 350 360 370 380
pF1KB5 QAVFIGHDWGGMLVWYMALFYPERV-RAVASLNTPFIPANPNMSPLESIKANP--VFDY-
. :. . : .: :. :. .:.:. ..: .: .. :. ..: :..:
NP_001 DLVLRKKPPGTLLPSAHAIEREFRIMKALANAGVP-VPNVLDLCEDSSVIGTPFYVMEYC
340 350 360 370 380 390
390 400 410 420 430 440
pF1KB5 -QLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKV-CEAGGLFVNSPEEPSLSRM
: ...:.. :: . : ... : . . ..:.: .: :: . . . :
NP_001 PGLIYKDPSLP--GLEPSHRR---AIYTAMNTVLCKIHSVDLQAVGLEDYGKQGDYIPR-
400 410 420 430 440 450
450 460 470 480 490 500
pF1KB5 VTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVP
... .:.:.. : . ::: .: : :.
NP_001 ----QVRTWVKQYRAS----ETSTIPAMERLIEWLPLHLPRQQRTTVVHGDFRLDNLVFH
460 470 480 490 500
510 520 530 540 550
pF1KB5 QMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLDSDARNPPVVSKM
NP_001 PEEPEVLAVLDWELSTLGDPLADVAYSCLAHYLPSSFPVLRGINDCDLTQLGIPAAEEYF
510 520 530 540 550 560
>>NP_001240830 (OMIM: 601029) mesoderm-specific transcri (292 aa)
initn: 148 init1: 122 opt: 148 Z-score: 176.7 bits: 41.6 E(85289): 0.0042
Smith-Waterman score: 148; 27.9% identity (55.9% similar) in 136 aa overlap (222-350:20-153)
200 210 220 230 240 250
pF1KB5 PARDLGMVTILVQDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLH
:. : : . : : : . .:.
NP_001 MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIF
10 20 30 40
260 270 280 290 300
pF1KB5 FVE----LGSGPAVCLCHGFPESWYSWRYQI-PALAQAGYRVLAMDMKGYGESSAPPEIE
. . .:: : : :::: : :.: :.: .:. .::.:.:. :.: :. : . .
NP_001 YQDSVGVVGSPEIVVLLHGFPTSSYDW-YKIWEGLTLRFHRVIALDFLGFGFSDKP-RPH
50 60 70 80 90 100
310 320 330 340 350 360
pF1KB5 EYCMEVLCKEMVTFLDKLGLS--QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIP
.: . . . ..: .:::. . ...::.: ... . : .
NP_001 HYSIFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLS
110 120 130 140 150 160
370 380 390 400 410 420
pF1KB5 ANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCE
NP_001 NGGIFPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLLQYINQRKKFRRRWVGALA
170 180 190 200 210 220
>>NP_001240831 (OMIM: 601029) mesoderm-specific transcri (292 aa)
initn: 148 init1: 122 opt: 148 Z-score: 176.7 bits: 41.6 E(85289): 0.0042
Smith-Waterman score: 148; 27.9% identity (55.9% similar) in 136 aa overlap (222-350:20-153)
200 210 220 230 240 250
pF1KB5 PARDLGMVTILVQDTDTALKELEKVTGIQLLNTPAPLPTSCNPSDMSHGYVTVKPRVRLH
:. : : . : : : . .:.
NP_001 MREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIF
10 20 30 40
260 270 280 290 300
pF1KB5 FVE----LGSGPAVCLCHGFPESWYSWRYQI-PALAQAGYRVLAMDMKGYGESSAPPEIE
. . .:: : : :::: : :.: :.: .:. .::.:.:. :.: :. : . .
NP_001 YQDSVGVVGSPEIVVLLHGFPTSSYDW-YKIWEGLTLRFHRVIALDFLGFGFSDKP-RPH
50 60 70 80 90 100
310 320 330 340 350 360
pF1KB5 EYCMEVLCKEMVTFLDKLGLS--QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIP
.: . . . ..: .:::. . ...::.: ... . : .
NP_001 HYSIFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLS
110 120 130 140 150 160
370 380 390 400 410 420
pF1KB5 ANPNMSPLESIKANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCE
NP_001 NGGIFPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLLQYINQRKKFRRRWVGALA
170 180 190 200 210 220
555 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:11:50 2016 done: Mon Nov 7 02:11:51 2016
Total Scan time: 8.670 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]