Result of FASTA (omim) for
pFN21AB4905
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4905, 352 aa
1>>>pF1KB4905 352 - 352 aa - 352 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1045+/-0.000362; mu= 18.1601+/- 0.023
mean_var=98.0086+/-21.747, 0's: 0 Z-trim(114.9): 664 B-trim: 1120 in 1/50
Lambda= 0.129551
statistics sampled from 24174 (24960) to 24174 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.293), width: 16
Scan time: 8.780
The best scores are: opt bits E(85289)
NP_001137391 (OMIM: 601531) leukotriene B4 recepto ( 352) 2241 429.4 5.8e-120
NP_858043 (OMIM: 601531) leukotriene B4 receptor 1 ( 352) 2241 429.4 5.8e-120
NP_001158164 (OMIM: 605773) leukotriene B4 recepto ( 358) 790 158.2 2.6e-38
NP_062813 (OMIM: 605773) leukotriene B4 receptor 2 ( 358) 790 158.2 2.6e-38
NP_001166031 (OMIM: 182455) somatostatin receptor ( 364) 500 104.0 5.4e-22
NP_001044 (OMIM: 182455) somatostatin receptor typ ( 364) 500 104.0 5.4e-22
NP_001727 (OMIM: 113995) C5a anaphylatoxin chemota ( 350) 482 100.6 5.4e-21
NP_001471 (OMIM: 600377) galanin receptor type 1 [ ( 349) 462 96.9 7.2e-20
XP_016884413 (OMIM: 182453) PREDICTED: somatostati ( 418) 447 94.2 5.6e-19
XP_011528651 (OMIM: 182453) PREDICTED: somatostati ( 418) 447 94.2 5.6e-19
NP_001265616 (OMIM: 182453) somatostatin receptor ( 418) 447 94.2 5.6e-19
XP_016884412 (OMIM: 182453) PREDICTED: somatostati ( 418) 447 94.2 5.6e-19
NP_001042 (OMIM: 182453) somatostatin receptor typ ( 418) 447 94.2 5.6e-19
XP_006724374 (OMIM: 182453) PREDICTED: somatostati ( 418) 447 94.2 5.6e-19
XP_005261778 (OMIM: 182453) PREDICTED: somatostati ( 418) 447 94.2 5.6e-19
NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 437 92.2 1.9e-18
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 437 92.2 1.9e-18
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 437 92.3 2.1e-18
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 437 92.3 2.1e-18
XP_016859321 (OMIM: 600239) PREDICTED: G-protein c ( 355) 435 91.8 2.4e-18
NP_001248384 (OMIM: 600239) G-protein coupled rece ( 355) 435 91.8 2.4e-18
NP_001248383 (OMIM: 600239) G-protein coupled rece ( 355) 435 91.8 2.4e-18
NP_001248382 (OMIM: 600239) G-protein coupled rece ( 355) 435 91.8 2.4e-18
NP_005270 (OMIM: 600239) G-protein coupled recepto ( 355) 435 91.8 2.4e-18
XP_005246528 (OMIM: 600239) PREDICTED: G-protein c ( 355) 435 91.8 2.4e-18
NP_001091669 (OMIM: 600239) G-protein coupled rece ( 355) 435 91.8 2.4e-18
NP_001248381 (OMIM: 600239) G-protein coupled rece ( 355) 435 91.8 2.4e-18
NP_033611 (OMIM: 106165,145500,267430) type-1 angi ( 359) 420 89.0 1.7e-17
NP_000676 (OMIM: 106165,145500,267430) type-1 angi ( 359) 420 89.0 1.7e-17
NP_114438 (OMIM: 106165,145500,267430) type-1 angi ( 388) 420 89.1 1.8e-17
NP_114038 (OMIM: 106165,145500,267430) type-1 angi ( 394) 420 89.1 1.8e-17
NP_004826 (OMIM: 106165,145500,267430) type-1 angi ( 394) 420 89.1 1.8e-17
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 417 88.5 2.5e-17
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 417 88.5 2.5e-17
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 417 88.5 2.5e-17
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 417 88.5 2.6e-17
NP_005289 (OMIM: 602174) probable G-protein couple ( 361) 415 88.1 3.2e-17
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 412 87.5 4.4e-17
NP_001269116 (OMIM: 300201) cysteinyl leukotriene ( 337) 412 87.5 4.6e-17
NP_001269115 (OMIM: 300201) cysteinyl leukotriene ( 337) 412 87.5 4.6e-17
NP_006630 (OMIM: 300201) cysteinyl leukotriene rec ( 337) 412 87.5 4.6e-17
NP_001269117 (OMIM: 300201) cysteinyl leukotriene ( 337) 412 87.5 4.6e-17
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 406 86.4 1e-16
NP_005288 (OMIM: 601751) melanin-concentrating hor ( 422) 404 86.1 1.5e-16
NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362) 403 85.9 1.5e-16
NP_061822 (OMIM: 600896) urotensin-2 receptor [Hom ( 389) 402 85.7 1.8e-16
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 401 85.5 2e-16
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 401 85.5 2e-16
NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 400 85.3 2.3e-16
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 400 85.3 2.3e-16
>>NP_001137391 (OMIM: 601531) leukotriene B4 receptor 1 (352 aa)
initn: 2241 init1: 2241 opt: 2241 Z-score: 2274.7 bits: 429.4 E(85289): 5.8e-120
Smith-Waterman score: 2241; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352)
10 20 30 40 50 60
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSILKRMQKRSVTALMVLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSILKRMQKRSVTALMVLNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 ALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLDRSLAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLDRSLAVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNMSLCFPRYPSEGHRAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNMSLCFPRYPSEGHRAF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 HLIFEAVTGFLLPFLAVVASYSDIGRRLQARRFRRSRRTGRLVVLIILTFAAFWLPYHVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLIFEAVTGFLLPFLAVVASYSDIGRRLQARRFRRSRRTGRLVVLIILTFAAFWLPYHVV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 NLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVGF
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 VAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNELN
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNELN
310 320 330 340 350
>>NP_858043 (OMIM: 601531) leukotriene B4 receptor 1 [Ho (352 aa)
initn: 2241 init1: 2241 opt: 2241 Z-score: 2274.7 bits: 429.4 E(85289): 5.8e-120
Smith-Waterman score: 2241; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352)
10 20 30 40 50 60
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSILKRMQKRSVTALMVLNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_858 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSILKRMQKRSVTALMVLNL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 ALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLDRSLAVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_858 ALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLDRSLAVA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 RPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNMSLCFPRYPSEGHRAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_858 RPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNMSLCFPRYPSEGHRAF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 HLIFEAVTGFLLPFLAVVASYSDIGRRLQARRFRRSRRTGRLVVLIILTFAAFWLPYHVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_858 HLIFEAVTGFLLPFLAVVASYSDIGRRLQARRFRRSRRTGRLVVLIILTFAAFWLPYHVV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 NLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_858 NLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVGF
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 VAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNELN
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_858 VAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNELN
310 320 330 340 350
>>NP_001158164 (OMIM: 605773) leukotriene B4 receptor 2 (358 aa)
initn: 716 init1: 379 opt: 790 Z-score: 808.9 bits: 158.2 E(85289): 2.6e-38
Smith-Waterman score: 796; 45.7% identity (71.1% similar) in 322 aa overlap (21-336:25-331)
10 20 30 40 50
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSIL--KRMQKRSVTA
:..::.. : :::::.:::::. . . : ..:
NP_001 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALL--GLPGNGFVVWSLAGWRPARGRPLAA
10 20 30 40 50
60 70 80 90 100 110
pF1KB4 LMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLD
.::.::::: :::: .:.:. ::.. .: .: :::. .:::..:::::::: .::.
NP_001 TLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB4 RSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNM-SLCFPRYP
: :::.:::.. .::. :.:::.: ..:. ..:::.:. .:: . :. . .:: .:
NP_001 RCLAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHL--WRDRVCQLC---HP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 SEGHRAFHLIFEAVTGFLLPFLAVVASYSDIGRRLQARRF---RRSRRTGRLVVLIILTF
: : : :: .:..:.:.::: ... :: ::.. :. :.. :.:::: :.:.:
NP_001 SPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 AAFWLPYHVVNLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGG
. .: :::.::: .: ::: ..:. .: . :: ::::.:::::::::. ..:
NP_001 GLLWAPYHAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB4 GLLRSAGVGFVAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNE
:: :: :...:.::.: :: ::: :.. : : :. :
NP_001 DLLPRAGPRFLTRLFEGSG-EA----RGG--GRS-REGTMELRTTPQLKVVGQGRGNGDP
300 310 320 330 340
pF1KB4 LN
NP_001 GGGMEKDGPEWDL
350
>>NP_062813 (OMIM: 605773) leukotriene B4 receptor 2 [Ho (358 aa)
initn: 716 init1: 379 opt: 790 Z-score: 808.9 bits: 158.2 E(85289): 2.6e-38
Smith-Waterman score: 796; 45.7% identity (71.1% similar) in 322 aa overlap (21-336:25-331)
10 20 30 40 50
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSIL--KRMQKRSVTA
:..::.. : :::::.:::::. . . : ..:
NP_062 MSVCYRPPGNETLLSWKTSRATGTAFLLLAALL--GLPGNGFVVWSLAGWRPARGRPLAA
10 20 30 40 50
60 70 80 90 100 110
pF1KB4 LMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSMYASVLLITAMSLD
.::.::::: :::: .:.:. ::.. .: .: :::. .:::..:::::::: .::.
NP_062 TLVLHLALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQ
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB4 RSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVVPWKTNM-SLCFPRYP
: :::.:::.. .::. :.:::.: ..:. ..:::.:. .:: . :. . .:: .:
NP_062 RCLAVTRPFLAPRLRSPALARRLLLAVWLAALLLAVPAAVYRHL--WRDRVCQLC---HP
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 SEGHRAFHLIFEAVTGFLLPFLAVVASYSDIGRRLQARRF---RRSRRTGRLVVLIILTF
: : : :: .:..:.:.::: ... :: ::.. :. :.. :.:::: :.:.:
NP_062 SPVHAAAHLSLETLTAFVLPFGLMLGCYSVTLARLRGARWGSGRHGARVGRLVSAIVLAF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 AAFWLPYHVVNLAEAGRALAGQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGG
. .: :::.::: .: ::: ..:. .: . :: ::::.:::::::::. ..:
NP_062 GLLWAPYHAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAG
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB4 GLLRSAGVGFVAKLLEGTGSEASSTRRGGSLGQTARSGPAALEPGPSESLTASSPLKLNE
:: :: :...:.::.: :: ::: :.. : : :. :
NP_062 DLLPRAGPRFLTRLFEGSG-EA----RGG--GRS-REGTMELRTTPQLKVVGQGRGNGDP
300 310 320 330 340
pF1KB4 LN
NP_062 GGGMEKDGPEWDL
350
>>NP_001166031 (OMIM: 182455) somatostatin receptor type (364 aa)
initn: 459 init1: 311 opt: 500 Z-score: 515.9 bits: 104.0 E(85289): 5.4e-22
Smith-Waterman score: 500; 32.1% identity (60.9% similar) in 340 aa overlap (2-331:26-350)
10 20 30
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGN
: : . :: :.. ..:. .: .. :.:: ::
NP_001 MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGAR--AVLVPVLYLLVCAAGLGGN
10 20 30 40 50
40 50 60 70 80 90
pF1KB4 SFVVWSILKRMQKRSVTALMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYV
..:.. .:. . ..:: ...::::.::. .: ::. : . : :: . ::: .
NP_001 TLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTL
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB4 CGVSMYASVLLITAMSLDRSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYR
::....::. .:.::.:: :::..:. : . : .:. . :. ::::. .. :.:..
NP_001 DGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFA
120 130 140 150 160 170
160 170 180 190 200
pF1KB4 TVVPWKT-NMSLCFPRYPSEGHRAFHLIFEAVTGFLLPFLAVVASYSDI-------GRRL
: : : : .:. : : .:. :: ::. :.:.. : : : :.
NP_001 DVQEGGTCNAS--WPE-PVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRV
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB4 QARRFRRSRRTGRLVVLIILTFAAFWLPYHVVNLAEAGRALAGQAAGLGLVGKRLSLARN
: : :.. :.:....:.::. :::. .::... . :: . :. ::
NP_001 GCVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYF--------
240 250 260 270 280
270 280 290 300 310 320
pF1KB4 VLIALAFLSSSVNPVLYACAGGGLLRSAGVGFVAKLLEGTGS-EASSTR-RGGSLGQTAR
.. :.. .: .:::::. . .. .: : : .:.:. .:..:. : . : .
NP_001 FVVILSYANSCANPVLYGFLSDNFRQS--FQKVLCLRKGSGAKDADATEPRPDRIRQQQE
290 300 310 320 330 340
330 340 350
pF1KB4 SGPAALEPGPSESLTASSPLKLNELN
. : :
NP_001 ATPPAHRAAANGLMQTSKL
350 360
>>NP_001044 (OMIM: 182455) somatostatin receptor type 5 (364 aa)
initn: 459 init1: 311 opt: 500 Z-score: 515.9 bits: 104.0 E(85289): 5.4e-22
Smith-Waterman score: 500; 32.1% identity (60.9% similar) in 340 aa overlap (2-331:26-350)
10 20 30
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGN
: : . :: :.. ..:. .: .. :.:: ::
NP_001 MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGAR--AVLVPVLYLLVCAAGLGGN
10 20 30 40 50
40 50 60 70 80 90
pF1KB4 SFVVWSILKRMQKRSVTALMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHYV
..:.. .:. . ..:: ...::::.::. .: ::. : . : :: . ::: .
NP_001 TLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTL
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB4 CGVSMYASVLLITAMSLDRSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYR
::....::. .:.::.:: :::..:. : . : .:. . :. ::::. .. :.:..
NP_001 DGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFA
120 130 140 150 160 170
160 170 180 190 200
pF1KB4 TVVPWKT-NMSLCFPRYPSEGHRAFHLIFEAVTGFLLPFLAVVASYSDI-------GRRL
: : : : .:. : : .:. :: ::. :.:.. : : : :.
NP_001 DVQEGGTCNAS--WPE-PVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRV
180 190 200 210 220 230
210 220 230 240 250 260
pF1KB4 QARRFRRSRRTGRLVVLIILTFAAFWLPYHVVNLAEAGRALAGQAAGLGLVGKRLSLARN
: : :.. :.:....:.::. :::. .::... . :: . :. ::
NP_001 GCVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYF--------
240 250 260 270 280
270 280 290 300 310 320
pF1KB4 VLIALAFLSSSVNPVLYACAGGGLLRSAGVGFVAKLLEGTGS-EASSTR-RGGSLGQTAR
.. :.. .: .:::::. . .. .: : : .:.:. .:..:. : . : .
NP_001 FVVILSYANSCANPVLYGFLSDNFRQS--FQKVLCLRKGSGAKDADATEPRPDRIRQQQE
290 300 310 320 330 340
330 340 350
pF1KB4 SGPAALEPGPSESLTASSPLKLNELN
. : :
NP_001 ATPPAHRAAANGLMQTSKL
350 360
>>NP_001727 (OMIM: 113995) C5a anaphylatoxin chemotactic (350 aa)
initn: 399 init1: 225 opt: 482 Z-score: 497.9 bits: 100.6 E(85289): 5.4e-21
Smith-Waterman score: 482; 31.5% identity (62.2% similar) in 333 aa overlap (1-324:22-338)
10 20 30
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFV
.:: . . .: : ..::.....:.. ::. ::..:
NP_001 MNSFNYTTPDYGHYDDKDTLDLNTPVDKTSNTLRVP--DILALVIFAVVFLVGVLGNALV
10 20 30 40 50
40 50 60 70 80 90
pF1KB4 VWSILKRMQKRSVTALMVLNLALADLAVLLTAP-FFLHFLAQGTWSFGLAGCRLCHYVCG
:: . ::...:. ::::.::. :. : .: .. . : :: :.: . .
NP_001 VW-VTAFEAKRTINAIWFLNLAVADFLSCLALPILFTSIVQHHHWPFGGAACSILPSLIL
60 70 80 90 100 110
100 110 120 130 140 150
pF1KB4 VSMYASVLLITAMSLDRSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTV
..::::.::....: :: : : .:. :..: ..: . : : :..::. : . ::.:
NP_001 LNMYASILLLATISADRFLLVFKPIWCQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVV
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB4 ----VPWKTNMSLCFPRYPSEGHRAFHL-IFEAVTGFLLPFLAVVASYSDIGRRLQARRF
: :. :: : . .: . : . : ::: :.:... :. : : .::
NP_001 REEYFPPKV---LCGVDYSHDKRRERAVAIVRLVLGFLWPLLTLTICYTFILLRTWSRRA
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB4 RRSRRTGRLVVLIILTFAAFWLPYHVVNLAEAGRALAGQAAGLGLVGKRLSLARNVLIAL
:: .: ..:: .. .: :::::.:... . : .. . :..: :: ...
NP_001 TRSTKTLKVVVAVVASFFIFWLPYQVTGIMMS--FLEPSSPTFLLLNKLDSLC----VSF
240 250 260 270 280
280 290 300 310 320 330
pF1KB4 AFLSSSVNPVLYACAGGGL---LRSAGVGFVAKLLEGTGSEASSTRRGGSLGQTARSGPA
:... .::..:. :: :. ::.. . .::... .: : .:.. :. ..
NP_001 AYINCCINPIIYVVAGQGFQGRLRKS----LPSLLRNVLTEESVVRESKSFTRSTVDTMA
290 300 310 320 330 340
340 350
pF1KB4 ALEPGPSESLTASSPLKLNELN
NP_001 QKTQAV
350
>>NP_001471 (OMIM: 600377) galanin receptor type 1 [Homo (349 aa)
initn: 253 init1: 180 opt: 462 Z-score: 477.7 bits: 96.9 E(85289): 7.2e-20
Smith-Waterman score: 466; 31.0% identity (64.5% similar) in 290 aa overlap (10-286:25-304)
10 20 30 40
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPGNSFVVWSILK
: .:. .......... .:.:. :::.:. ..:
NP_001 MELAVGNLSEGNASWPEPPAPEPGPLFGIGVENFVTLVVFGLIFALGVLGNSLVI-TVLA
10 20 30 40 50
50 60 70 80 90 100
pF1KB4 RMQK---RSVTALMVLNLALADLAVLL-TAPFFLHFLAQGTWSFGLAGCRLCHYVCGVSM
: . ::.: :..:::..:::: :: :: : :: .: :.. :: :::
NP_001 RSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSM
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB4 YASVLLITAMSLDRSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAYRTVV-P
.:.. ..:::.:: .:... :..::.. : .. ::.::. .:.:: .. . :
NP_001 LVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMASPVAYHQGLFHP
120 130 140 150 160 170
170 180 190 200 210
pF1KB4 WKTNMSLCFPRYPSEGHRAFHLIFEAVTGFLLPFLAVVASYSDIGRRLQAR---RFRRS-
.:...:. ..:. :. ... : :.:::.: . :. . .:. . ..:
NP_001 RASNQTFCWEQWPDPRHKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNMSKKSE
180 190 200 210 220 230
220 230 240 250 260 270
pF1KB4 ---RRTGRLVVLIILTFAAFWLPYHVVNL-AEAGRALAGQAAGLGLVGKRLSLARNVLIA
..:.. :......:. :::.:...: :: : .. :.. : : .
NP_001 ASKKKTAQTVLVVVVVFGISWLPHHIIHLWAEFG-VFPLTPASF--------LFRITAHC
240 250 260 270 280 290
280 290 300 310 320 330
pF1KB4 LAFLSSSVNPVLYACAGGGLLRSAGVGFVAKLLEGTGSEASSTRRGGSLGQTARSGPAAL
::. .:::::..::
NP_001 LAYSNSSVNPIIYAFLSENFRKAYKQVFKCHIRKDSHLSDTKESKSRIDTPPSTNCTHV
300 310 320 330 340
>>XP_016884413 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 510 init1: 319 opt: 447 Z-score: 461.6 bits: 94.2 E(85289): 5.6e-19
Smith-Waterman score: 522; 34.5% identity (62.1% similar) in 293 aa overlap (6-285:32-313)
10 20 30
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPG
::.: :. ..: .. :. .::: :
XP_016 DMLHPSSVSTTSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVGLLG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB4 NSFVVWSILKRMQKRSVTALMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHY
::.:.. .:.. . ::: ...::::::: .: ::. : . : :: :::
XP_016 NSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRLVMA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB4 VCGVSMYASVLLITAMSLDRSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAY
: :.....:.. .:.::.:: :::..: : . :: .:: : :..:: : ... ::...
XP_016 VDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPVVVF
130 140 150 160 170 180
160 170 180 190 200
pF1KB4 RTVVPWKTNMSLCFPRYP--SEGHRAFHLIFEAVTGFLLP-------FLAVVASYSDIGR
. :: .:: : ..: . . :: .:. :. ::. : .: .:.. . ::
XP_016 -SGVP--RGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
190 200 210 220 230
210 220 230 240 250 260
pF1KB4 RLQA----RRFRRSRRTGRLVVLIILTFAAFWLPYHVVNLAEAGRALAGQAAGLGLVGKR
:. : :: : ::. :.:: .. :. :.:..:.:.... : . : .::
XP_016 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLY---
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB4 LSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVGFVAKLLEGTGSEASSTRRGGSLG
...:: . .: .::.::
XP_016 -----FLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
>>XP_011528651 (OMIM: 182453) PREDICTED: somatostatin re (418 aa)
initn: 510 init1: 319 opt: 447 Z-score: 461.6 bits: 94.2 E(85289): 5.6e-19
Smith-Waterman score: 522; 34.5% identity (62.1% similar) in 293 aa overlap (6-285:32-313)
10 20 30
pF1KB4 MNTTSSAAPPSLGVEFISLLAIILLSVALAVGLPG
::.: :. ..: .. :. .::: :
XP_011 DMLHPSSVSTTSEPENASSAWPPDATLGNVSAGPSPAGLAVSGVLIPLVYLVVCVVGLLG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB4 NSFVVWSILKRMQKRSVTALMVLNLALADLAVLLTAPFFLHFLAQGTWSFGLAGCRLCHY
::.:.. .:.. . ::: ...::::::: .: ::. : . : :: :::
XP_011 NSLVIYVVLRHTASPSVTNVYILNLALADELFMLGLPFLAAQNALSYWPFGSLMCRLVMA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB4 VCGVSMYASVLLITAMSLDRSLAVARPFVSQKLRTKAMARRVLAGIWVLSFLLATPVLAY
: :.....:.. .:.::.:: :::..: : . :: .:: : :..:: : ... ::...
XP_011 VDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAVVVLPVVVF
130 140 150 160 170 180
160 170 180 190 200
pF1KB4 RTVVPWKTNMSLCFPRYP--SEGHRAFHLIFEAVTGFLLP-------FLAVVASYSDIGR
. :: .:: : ..: . . :: .:. :. ::. : .: .:.. . ::
XP_011 -SGVP--RGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGR
190 200 210 220 230
210 220 230 240 250 260
pF1KB4 RLQA----RRFRRSRRTGRLVVLIILTFAAFWLPYHVVNLAEAGRALAGQAAGLGLVGKR
:. : :: : ::. :.:: .. :. :.:..:.:.... : . : .::
XP_011 RVWAPSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLY---
240 250 260 270 280 290
270 280 290 300 310 320
pF1KB4 LSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVGFVAKLLEGTGSEASSTRRGGSLG
...:: . .: .::.::
XP_011 -----FLVVALPYANSCANPILYGFLSYRFKQGFRRVLLRPSRRVRSQEPTVGPPEKTEE
300 310 320 330 340 350
352 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:07:11 2016 done: Sun Nov 6 22:07:12 2016
Total Scan time: 8.780 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]