Result of FASTA (omim) for
pFN21AB4810
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4810, 305 aa
1>>>pF1KB4810 305 - 305 aa - 305 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1205+/-0.000423; mu= 16.1850+/- 0.026
mean_var=57.4108+/-11.892, 0's: 0 Z-trim(108.6): 43 B-trim: 983 in 1/55
Lambda= 0.169269
statistics sampled from 16712 (16755) to 16712 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.549), E-opt: 0.2 (0.196), width: 16
Scan time: 6.160
The best scores are: opt bits E(85289)
NP_004935 (OMIM: 602244,614420) deoxyribonuclease ( 305) 2001 497.2 1.7e-140
NP_001243489 (OMIM: 602244,614420) deoxyribonuclea ( 275) 1324 331.9 8.8e-91
NP_005214 (OMIM: 125505,152700) deoxyribonuclease- ( 282) 795 202.7 7e-52
XP_011520695 (OMIM: 125505,152700) PREDICTED: deox ( 282) 795 202.7 7e-52
XP_016878488 (OMIM: 125505,152700) PREDICTED: deox ( 282) 795 202.7 7e-52
XP_016884821 (OMIM: 300081) PREDICTED: deoxyribonu ( 302) 782 199.5 6.7e-51
NP_001290549 (OMIM: 300081) deoxyribonuclease-1-li ( 302) 782 199.5 6.7e-51
XP_005277886 (OMIM: 300081) PREDICTED: deoxyribonu ( 302) 782 199.5 6.7e-51
NP_001009934 (OMIM: 300081) deoxyribonuclease-1-li ( 302) 782 199.5 6.7e-51
NP_001009932 (OMIM: 300081) deoxyribonuclease-1-li ( 302) 782 199.5 6.7e-51
XP_011529424 (OMIM: 300081) PREDICTED: deoxyribonu ( 302) 782 199.5 6.7e-51
NP_001009933 (OMIM: 300081) deoxyribonuclease-1-li ( 302) 782 199.5 6.7e-51
NP_006721 (OMIM: 300081) deoxyribonuclease-1-like ( 302) 782 199.5 6.7e-51
XP_005255205 (OMIM: 125505,152700) PREDICTED: deox ( 276) 741 189.5 6.4e-48
XP_016878481 (OMIM: 125505,152700) PREDICTED: deox ( 304) 741 189.5 7e-48
XP_016878482 (OMIM: 125505,152700) PREDICTED: deox ( 304) 741 189.5 7e-48
XP_016878487 (OMIM: 125505,152700) PREDICTED: deox ( 304) 741 189.5 7e-48
XP_016878483 (OMIM: 125505,152700) PREDICTED: deox ( 304) 741 189.5 7e-48
XP_016878484 (OMIM: 125505,152700) PREDICTED: deox ( 304) 741 189.5 7e-48
XP_016878486 (OMIM: 125505,152700) PREDICTED: deox ( 304) 741 189.5 7e-48
XP_016878485 (OMIM: 125505,152700) PREDICTED: deox ( 304) 741 189.5 7e-48
XP_006720917 (OMIM: 125505,152700) PREDICTED: deox ( 213) 648 166.8 3.5e-41
XP_016878490 (OMIM: 125505,152700) PREDICTED: deox ( 235) 594 153.6 3.6e-37
XP_016878491 (OMIM: 125505,152700) PREDICTED: deox ( 235) 594 153.6 3.6e-37
NP_001288609 (OMIM: 602622) deoxyribonuclease-1-li ( 299) 466 122.4 1.1e-27
NP_001365 (OMIM: 602622) deoxyribonuclease-1-like ( 299) 466 122.4 1.1e-27
XP_011520701 (OMIM: 602622) PREDICTED: deoxyribonu ( 390) 466 122.4 1.4e-27
XP_016878496 (OMIM: 125505,152700) PREDICTED: deox ( 184) 320 86.6 4e-17
XP_016878495 (OMIM: 125505,152700) PREDICTED: deox ( 187) 291 79.5 5.5e-15
XP_016878492 (OMIM: 125505,152700) PREDICTED: deox ( 187) 291 79.5 5.5e-15
XP_016878493 (OMIM: 125505,152700) PREDICTED: deox ( 187) 291 79.5 5.5e-15
XP_016878494 (OMIM: 125505,152700) PREDICTED: deox ( 187) 291 79.5 5.5e-15
XP_016878489 (OMIM: 125505,152700) PREDICTED: deox ( 279) 291 79.6 7.8e-15
>>NP_004935 (OMIM: 602244,614420) deoxyribonuclease gamm (305 aa)
initn: 2001 init1: 2001 opt: 2001 Z-score: 2643.6 bits: 497.2 E(85289): 1.7e-140
Smith-Waterman score: 2001; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305)
10 20 30 40 50 60
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
250 260 270 280 290 300
pF1KB4 KSKRS
:::::
NP_004 KSKRS
>>NP_001243489 (OMIM: 602244,614420) deoxyribonuclease g (275 aa)
initn: 1324 init1: 1324 opt: 1324 Z-score: 1750.8 bits: 331.9 E(85289): 8.8e-91
Smith-Waterman score: 1738; 90.2% identity (90.2% similar) in 305 aa overlap (1-305:1-275)
10 20 30 40 50 60
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
::::::::::::::::: :::::::::::::
NP_001 KDSNNRICPILMEKLNR------------------------------EKLVSVKRSYHYH
70 80 90
130 140 150 160 170 180
pF1KB4 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
100 110 120 130 140 150
190 200 210 220 230 240
pF1KB4 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
160 170 180 190 200 210
250 260 270 280 290 300
pF1KB4 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
220 230 240 250 260 270
pF1KB4 KSKRS
:::::
NP_001 KSKRS
>>NP_005214 (OMIM: 125505,152700) deoxyribonuclease-1 pr (282 aa)
initn: 678 init1: 364 opt: 795 Z-score: 1052.4 bits: 202.7 E(85289): 7e-52
Smith-Waterman score: 795; 44.8% identity (72.4% similar) in 279 aa overlap (5-282:7-282)
10 20 30 40 50
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVM
:. :: : ...:....: .::...:::.:. . . .. ::....: :: ::.
NP_005 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 EIKDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYH
:..::. :...::... ::.::.: ::::.:::.: :.:. ::. ::.
NP_005 EVRDSHLTAVGKLLDNLNQDAPD--TYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYY
70 80 90 100 110
120 130 140 150 160 170
pF1KB4 YHDY-QDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKH
: : . :.:.::: .: : : : :..:.:.:::..: .: ::: : .:: ::..
NP_005 YDDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RWKAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIV
.: :. ..::::::::::: . :..::: :.: : ::: :. :::. :.:::::::
NP_005 KWGLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATP-THCAYDRIV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 LRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLR
. :. . ..::: : :.:: :: :... : .:::.::: :.
NP_005 VAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
240 250 260 270 280
300
pF1KB4 KKTKSKRS
>>XP_011520695 (OMIM: 125505,152700) PREDICTED: deoxyrib (282 aa)
initn: 678 init1: 364 opt: 795 Z-score: 1052.4 bits: 202.7 E(85289): 7e-52
Smith-Waterman score: 795; 44.8% identity (72.4% similar) in 279 aa overlap (5-282:7-282)
10 20 30 40 50
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVM
:. :: : ...:....: .::...:::.:. . . .. ::....: :: ::.
XP_011 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 EIKDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYH
:..::. :...::... ::.::.: ::::.:::.: :.:. ::. ::.
XP_011 EVRDSHLTAVGKLLDNLNQDAPD--TYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYY
70 80 90 100 110
120 130 140 150 160 170
pF1KB4 YHDY-QDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKH
: : . :.:.::: .: : : : :..:.:.:::..: .: ::: : .:: ::..
XP_011 YDDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RWKAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIV
.: :. ..::::::::::: . :..::: :.: : ::: :. :::. :.:::::::
XP_011 KWGLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATP-THCAYDRIV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 LRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLR
. :. . ..::: : :.:: :: :... : .:::.::: :.
XP_011 VAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
240 250 260 270 280
300
pF1KB4 KKTKSKRS
>>XP_016878488 (OMIM: 125505,152700) PREDICTED: deoxyrib (282 aa)
initn: 678 init1: 364 opt: 795 Z-score: 1052.4 bits: 202.7 E(85289): 7e-52
Smith-Waterman score: 795; 44.8% identity (72.4% similar) in 279 aa overlap (5-282:7-282)
10 20 30 40 50
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVM
:. :: : ...:....: .::...:::.:. . . .. ::....: :: ::.
XP_016 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB4 EIKDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYH
:..::. :...::... ::.::.: ::::.:::.: :.:. ::. ::.
XP_016 EVRDSHLTAVGKLLDNLNQDAPD--TYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYY
70 80 90 100 110
120 130 140 150 160 170
pF1KB4 YHDY-QDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKH
: : . :.:.::: .: : : : :..:.:.:::..: .: ::: : .:: ::..
XP_016 YDDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB4 RWKAENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIV
.: :. ..::::::::::: . :..::: :.: : ::: :. :::. :.:::::::
XP_016 KWGLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTATP-THCAYDRIV
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB4 LRGQEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLR
. :. . ..::: : :.:: :: :... : .:::.::: :.
XP_016 VAGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
240 250 260 270 280
300
pF1KB4 KKTKSKRS
>>XP_016884821 (OMIM: 300081) PREDICTED: deoxyribonuclea (302 aa)
initn: 701 init1: 406 opt: 782 Z-score: 1034.8 bits: 199.5 E(85289): 6.7e-51
Smith-Waterman score: 782; 41.0% identity (76.4% similar) in 288 aa overlap (9-296:7-287)
10 20 30 40 50 60
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
::.:. ..: :.:::.::.. . .: ...::..:... ::::....:.
XP_016 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
::.. :.:...::: . : :. . : .:::.:: : :...:. . ..: :: :.
XP_016 VDSSGSAIPLLLRELNRFDGSG-PYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
: . :::.:::::. :. : ... ..:..::::::.. ::.. : .:. .:...:.
XP_016 D----EDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
... :..::::: :. . :: ...:::.: : :.:.: :::::. ::.:.:::.::.:
XP_016 SKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
.. : . .. ..::: ...:::::::..:::.::: .:. :.: . . :.:.
XP_016 ERCRSLL--HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLL
240 250 260 270 280 290
pF1KB4 KSKRS
XP_016 SLLSPQLCPAA
300
>>NP_001290549 (OMIM: 300081) deoxyribonuclease-1-like 1 (302 aa)
initn: 701 init1: 406 opt: 782 Z-score: 1034.8 bits: 199.5 E(85289): 6.7e-51
Smith-Waterman score: 782; 41.0% identity (76.4% similar) in 288 aa overlap (9-296:7-287)
10 20 30 40 50 60
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
::.:. ..: :.:::.::.. . .: ...::..:... ::::....:.
NP_001 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
::.. :.:...::: . : :. . : .:::.:: : :...:. . ..: :: :.
NP_001 VDSSGSAIPLLLRELNRFDGSG-PYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
: . :::.:::::. :. : ... ..:..::::::.. ::.. : .:. .:...:.
NP_001 D----EDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
... :..::::: :. . :: ...:::.: : :.:.: :::::. ::.:.:::.::.:
NP_001 SKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
.. : . .. ..::: ...:::::::..:::.::: .:. :.: . . :.:.
NP_001 ERCRSLL--HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLL
240 250 260 270 280 290
pF1KB4 KSKRS
NP_001 SLLSPQLCPAA
300
>>XP_005277886 (OMIM: 300081) PREDICTED: deoxyribonuclea (302 aa)
initn: 701 init1: 406 opt: 782 Z-score: 1034.8 bits: 199.5 E(85289): 6.7e-51
Smith-Waterman score: 782; 41.0% identity (76.4% similar) in 288 aa overlap (9-296:7-287)
10 20 30 40 50 60
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
::.:. ..: :.:::.::.. . .: ...::..:... ::::....:.
XP_005 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
::.. :.:...::: . : :. . : .:::.:: : :...:. . ..: :: :.
XP_005 VDSSGSAIPLLLRELNRFDGSG-PYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
: . :::.:::::. :. : ... ..:..::::::.. ::.. : .:. .:...:.
XP_005 D----EDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
... :..::::: :. . :: ...:::.: : :.:.: :::::. ::.:.:::.::.:
XP_005 SKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
.. : . .. ..::: ...:::::::..:::.::: .:. :.: . . :.:.
XP_005 ERCRSLL--HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLL
240 250 260 270 280 290
pF1KB4 KSKRS
XP_005 SLLSPQLCPAA
300
>>NP_001009934 (OMIM: 300081) deoxyribonuclease-1-like 1 (302 aa)
initn: 701 init1: 406 opt: 782 Z-score: 1034.8 bits: 199.5 E(85289): 6.7e-51
Smith-Waterman score: 782; 41.0% identity (76.4% similar) in 288 aa overlap (9-296:7-287)
10 20 30 40 50 60
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
::.:. ..: :.:::.::.. . .: ...::..:... ::::....:.
NP_001 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
::.. :.:...::: . : :. . : .:::.:: : :...:. . ..: :: :.
NP_001 VDSSGSAIPLLLRELNRFDGSG-PYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
: . :::.:::::. :. : ... ..:..::::::.. ::.. : .:. .:...:.
NP_001 D----EDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
... :..::::: :. . :: ...:::.: : :.:.: :::::. ::.:.:::.::.:
NP_001 SKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
.. : . .. ..::: ...:::::::..:::.::: .:. :.: . . :.:.
NP_001 ERCRSLL--HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLL
240 250 260 270 280 290
pF1KB4 KSKRS
NP_001 SLLSPQLCPAA
300
>>NP_001009932 (OMIM: 300081) deoxyribonuclease-1-like 1 (302 aa)
initn: 701 init1: 406 opt: 782 Z-score: 1034.8 bits: 199.5 E(85289): 6.7e-51
Smith-Waterman score: 782; 41.0% identity (76.4% similar) in 288 aa overlap (9-296:7-287)
10 20 30 40 50 60
pF1KB4 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
::.:. ..: :.:::.::.. . .: ...::..:... ::::....:.
NP_001 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEV
10 20 30 40 50
70 80 90 100 110 120
pF1KB4 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
::.. :.:...::: . : :. . : .:::.:: : :...:. . ..: :: :.
NP_001 VDSSGSAIPLLLRELNRFDGSG-PYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB4 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
: . :::.:::::. :. : ... ..:..::::::.. ::.. : .:. .:...:.
NP_001 D----EDDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQ
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB4 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
... :..::::: :. . :: ...:::.: : :.:.: :::::. ::.:.:::.::.:
NP_001 SKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB4 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
.. : . .. ..::: ...:::::::..:::.::: .:. :.: . . :.:.
NP_001 ERCRSLL--HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLL
240 250 260 270 280 290
pF1KB4 KSKRS
NP_001 SLLSPQLCPAA
300
305 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:14:52 2016 done: Mon Nov 7 01:14:52 2016
Total Scan time: 6.160 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]