Result of FASTA (omim) for
pFN21AB0443
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB0443, 372 aa
1>>>pF1KB0443 372 - 372 aa - 372 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.9395+/-0.000676; mu= -9.9123+/- 0.040
mean_var=882.5909+/-203.286, 0's: 0 Z-trim(113.6): 948 B-trim: 0 in 0/53
Lambda= 0.043171
statistics sampled from 21986 (23021) to 21986 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.27), width: 16
Scan time: 7.520
The best scores are: opt bits E(85289)
NP_001252 (OMIM: 603251) cyclin-dependent kinase 9 ( 372) 2490 171.5 2.8e-42
XP_016869673 (OMIM: 603251) PREDICTED: cyclin-depe ( 243) 1647 118.6 1.5e-26
XP_005257515 (OMIM: 615514) PREDICTED: cyclin-depe (1256) 979 78.3 1.1e-13
XP_016880242 (OMIM: 615514) PREDICTED: cyclin-depe (1261) 979 78.3 1.1e-13
XP_016880240 (OMIM: 615514) PREDICTED: cyclin-depe (1262) 979 78.3 1.1e-13
XP_016880241 (OMIM: 615514) PREDICTED: cyclin-depe (1262) 979 78.3 1.1e-13
XP_016880239 (OMIM: 615514) PREDICTED: cyclin-depe (1262) 979 78.3 1.1e-13
XP_011523209 (OMIM: 615514) PREDICTED: cyclin-depe (1262) 979 78.3 1.1e-13
XP_016880236 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_016880237 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523203 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523207 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523208 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_016880238 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523199 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523200 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523201 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_016880235 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523204 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523205 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_016880234 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523197 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523195 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523196 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523202 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_011523198 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
XP_016880233 (OMIM: 615514) PREDICTED: cyclin-depe (1393) 979 78.4 1.1e-13
NP_055898 (OMIM: 615514) cyclin-dependent kinase 1 (1481) 979 78.4 1.2e-13
XP_005257513 (OMIM: 615514) PREDICTED: cyclin-depe (1489) 979 78.4 1.2e-13
NP_057591 (OMIM: 615514) cyclin-dependent kinase 1 (1490) 979 78.4 1.2e-13
NP_112557 (OMIM: 603309) cyclin-dependent kinase 1 (1452) 976 78.2 1.3e-13
NP_003709 (OMIM: 603309) cyclin-dependent kinase 1 (1512) 976 78.2 1.3e-13
NP_443714 (OMIM: 603464) cyclin-dependent kinase 1 ( 360) 790 65.6 2.1e-10
XP_006721373 (OMIM: 603464) PREDICTED: cyclin-depe ( 343) 783 65.1 2.8e-10
XP_016879296 (OMIM: 603464) PREDICTED: cyclin-depe ( 337) 735 62.1 2.2e-09
XP_006721371 (OMIM: 603464) PREDICTED: cyclin-depe ( 354) 735 62.1 2.2e-09
XP_016870050 (OMIM: 610076) PREDICTED: cyclin-depe ( 351) 712 60.7 6e-09
XP_011523194 (OMIM: 615514) PREDICTED: cyclin-depe (1464) 706 61.4 1.5e-08
XP_016870051 (OMIM: 610076) PREDICTED: cyclin-depe ( 329) 671 58.1 3.4e-08
NP_001153839 (OMIM: 603464) cyclin-dependent kinas ( 289) 659 57.2 5.4e-08
XP_016879297 (OMIM: 603464) PREDICTED: cyclin-depe ( 289) 659 57.2 5.4e-08
XP_016879299 (OMIM: 603464) PREDICTED: cyclin-depe ( 272) 652 56.8 7.1e-08
NP_443713 (OMIM: 603464) cyclin-dependent kinase 1 ( 272) 652 56.8 7.1e-08
NP_001092003 (OMIM: 603464) cyclin-dependent kinas ( 283) 604 53.8 5.7e-07
XP_016879298 (OMIM: 603464) PREDICTED: cyclin-depe ( 283) 604 53.8 5.7e-07
NP_001310218 (OMIM: 300203,300672) cyclin-dependen ( 960) 614 55.3 6.6e-07
NP_003150 (OMIM: 300203,300672) cyclin-dependent k (1030) 614 55.4 6.9e-07
NP_001032420 (OMIM: 300203,300672) cyclin-dependen (1030) 614 55.4 6.9e-07
NP_001138778 (OMIM: 603368,616080) cyclin-dependen ( 326) 600 53.7 7.3e-07
NP_001250 (OMIM: 603368,616080) cyclin-dependent k ( 326) 600 53.7 7.3e-07
>>NP_001252 (OMIM: 603251) cyclin-dependent kinase 9 [Ho (372 aa)
initn: 2490 init1: 2490 opt: 2490 Z-score: 879.9 bits: 171.5 E(85289): 2.8e-42
Smith-Waterman score: 2490; 100.0% identity (100.0% similar) in 372 aa overlap (1-372:1-372)
10 20 30 40 50 60
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB0 ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB0 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB0 QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB0 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB0 AQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPRRKGSQITQQSTNQSRNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPRRKGSQITQQSTNQSRNP
310 320 330 340 350 360
370
pF1KB0 ATTNQTEFERVF
::::::::::::
NP_001 ATTNQTEFERVF
370
>>XP_016869673 (OMIM: 603251) PREDICTED: cyclin-dependen (243 aa)
initn: 1647 init1: 1647 opt: 1647 Z-score: 597.7 bits: 118.6 E(85289): 1.5e-26
Smith-Waterman score: 1647; 100.0% identity (100.0% similar) in 243 aa overlap (130-372:1-243)
100 110 120 130 140 150
pF1KB0 YLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR
::::::::::::::::::::::::::::::
XP_016 MQMLLNGLYYIHRNKILHRDMKAANVLITR
10 20 30
160 170 180 190 200 210
pF1KB0 DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM
40 50 60 70 80 90
220 230 240 250 260 270
pF1KB0 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL
100 110 120 130 140 150
280 290 300 310 320 330
pF1KB0 KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYL
160 170 180 190 200 210
340 350 360 370
pF1KB0 APPRRKGSQITQQSTNQSRNPATTNQTEFERVF
:::::::::::::::::::::::::::::::::
XP_016 APPRRKGSQITQQSTNQSRNPATTNQTEFERVF
220 230 240
>>XP_005257515 (OMIM: 615514) PREDICTED: cyclin-dependen (1256 aa)
initn: 695 init1: 345 opt: 979 Z-score: 366.8 bits: 78.3 E(85289): 1.1e-13
Smith-Waterman score: 979; 43.7% identity (72.1% similar) in 366 aa overlap (16-371:724-1079)
10 20 30 40
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV
:.:.. .. ::.::.:.:.::. . ::. :
XP_005 PQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELV
700 710 720 730 740 750
50 60 70 80 90 100
pF1KB0 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVF
::::: ..::::::::::.::::::. : :..:::. :: : : ... ::..::::
XP_005 ALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVF
760 770 780 790 800 810
110 120 130 140 150 160
pF1KB0 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
.. .::: ::: . ::.:. ..:: :..:..:: : :....::::.: .:.:.. .: .
XP_005 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQI
820 830 840 850 860 870
170 180 190 200 210 220
pF1KB0 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
::::::::: .. ...:.: :::.:.:::::::::::::. : : ::.:. :::..:..
XP_005 KLADFGLARLYN-SEESRP--YTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELF
880 890 900 910 920 930
230 240 250 260 270 280
pF1KB0 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV
:..::.:.: : :: :::.:::: : :::.: . .. .. : .:...... ...
XP_005 TKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFI
940 950 960 970 980
290 300 310 320 330
pF1KB0 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYL
::::.:..:.:::..: ....:. ::. : : :: . : :
XP_005 -PSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCH-----ELW
990 1000 1010 1020 1030 1040
340 350 360 370
pF1KB0 APPRRKGSQ----ITQQSTNQSRNPATTNQTEFERVF
. ::. : . . ... ::. : : :
XP_005 SKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIG
1050 1060 1070 1080 1090 1100
XP_005 LADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEA
1110 1120 1130 1140 1150 1160
>>XP_016880242 (OMIM: 615514) PREDICTED: cyclin-dependen (1261 aa)
initn: 695 init1: 345 opt: 979 Z-score: 366.8 bits: 78.3 E(85289): 1.1e-13
Smith-Waterman score: 979; 43.7% identity (72.1% similar) in 366 aa overlap (16-371:723-1078)
10 20 30 40
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV
:.:.. .. ::.::.:.:.::. . ::. :
XP_016 PQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELV
700 710 720 730 740 750
50 60 70 80 90 100
pF1KB0 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVF
::::: ..::::::::::.::::::. : :..:::. :: : : ... ::..::::
XP_016 ALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVF
760 770 780 790 800 810
110 120 130 140 150 160
pF1KB0 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
.. .::: ::: . ::.:. ..:: :..:..:: : :....::::.: .:.:.. .: .
XP_016 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQI
820 830 840 850 860 870
170 180 190 200 210 220
pF1KB0 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
::::::::: .. ...:.: :::.:.:::::::::::::. : : ::.:. :::..:..
XP_016 KLADFGLARLYN-SEESRP--YTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELF
880 890 900 910 920
230 240 250 260 270 280
pF1KB0 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV
:..::.:.: : :: :::.:::: : :::.: . .. .. : .:...... ...
XP_016 TKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFI
930 940 950 960 970 980
290 300 310 320 330
pF1KB0 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYL
::::.:..:.:::..: ....:. ::. : : :: . : :
XP_016 -PSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCH-----ELW
990 1000 1010 1020 1030 1040
340 350 360 370
pF1KB0 APPRRKGSQ----ITQQSTNQSRNPATTNQTEFERVF
. ::. : . . ... ::. : : :
XP_016 SKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIG
1050 1060 1070 1080 1090 1100
XP_016 LADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEA
1110 1120 1130 1140 1150 1160
>>XP_016880240 (OMIM: 615514) PREDICTED: cyclin-dependen (1262 aa)
initn: 695 init1: 345 opt: 979 Z-score: 366.8 bits: 78.3 E(85289): 1.1e-13
Smith-Waterman score: 979; 43.7% identity (72.1% similar) in 366 aa overlap (16-371:724-1079)
10 20 30 40
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV
:.:.. .. ::.::.:.:.::. . ::. :
XP_016 PQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELV
700 710 720 730 740 750
50 60 70 80 90 100
pF1KB0 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVF
::::: ..::::::::::.::::::. : :..:::. :: : : ... ::..::::
XP_016 ALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVF
760 770 780 790 800 810
110 120 130 140 150 160
pF1KB0 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
.. .::: ::: . ::.:. ..:: :..:..:: : :....::::.: .:.:.. .: .
XP_016 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQI
820 830 840 850 860 870
170 180 190 200 210 220
pF1KB0 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
::::::::: .. ...:.: :::.:.:::::::::::::. : : ::.:. :::..:..
XP_016 KLADFGLARLYN-SEESRP--YTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELF
880 890 900 910 920 930
230 240 250 260 270 280
pF1KB0 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV
:..::.:.: : :: :::.:::: : :::.: . .. .. : .:...... ...
XP_016 TKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFI
940 950 960 970 980
290 300 310 320 330
pF1KB0 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYL
::::.:..:.:::..: ....:. ::. : : :: . : :
XP_016 -PSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCH-----ELW
990 1000 1010 1020 1030 1040
340 350 360 370
pF1KB0 APPRRKGSQ----ITQQSTNQSRNPATTNQTEFERVF
. ::. : . . ... ::. : : :
XP_016 SKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIG
1050 1060 1070 1080 1090 1100
XP_016 LADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEA
1110 1120 1130 1140 1150 1160
>>XP_016880241 (OMIM: 615514) PREDICTED: cyclin-dependen (1262 aa)
initn: 695 init1: 345 opt: 979 Z-score: 366.8 bits: 78.3 E(85289): 1.1e-13
Smith-Waterman score: 979; 43.7% identity (72.1% similar) in 366 aa overlap (16-371:724-1079)
10 20 30 40
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV
:.:.. .. ::.::.:.:.::. . ::. :
XP_016 PQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELV
700 710 720 730 740 750
50 60 70 80 90 100
pF1KB0 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVF
::::: ..::::::::::.::::::. : :..:::. :: : : ... ::..::::
XP_016 ALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVF
760 770 780 790 800 810
110 120 130 140 150 160
pF1KB0 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
.. .::: ::: . ::.:. ..:: :..:..:: : :....::::.: .:.:.. .: .
XP_016 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQI
820 830 840 850 860 870
170 180 190 200 210 220
pF1KB0 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
::::::::: .. ...:.: :::.:.:::::::::::::. : : ::.:. :::..:..
XP_016 KLADFGLARLYN-SEESRP--YTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELF
880 890 900 910 920 930
230 240 250 260 270 280
pF1KB0 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV
:..::.:.: : :: :::.:::: : :::.: . .. .. : .:...... ...
XP_016 TKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFI
940 950 960 970 980
290 300 310 320 330
pF1KB0 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYL
::::.:..:.:::..: ....:. ::. : : :: . : :
XP_016 -PSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCH-----ELW
990 1000 1010 1020 1030 1040
340 350 360 370
pF1KB0 APPRRKGSQ----ITQQSTNQSRNPATTNQTEFERVF
. ::. : . . ... ::. : : :
XP_016 SKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIG
1050 1060 1070 1080 1090 1100
XP_016 LADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEA
1110 1120 1130 1140 1150 1160
>>XP_016880239 (OMIM: 615514) PREDICTED: cyclin-dependen (1262 aa)
initn: 695 init1: 345 opt: 979 Z-score: 366.8 bits: 78.3 E(85289): 1.1e-13
Smith-Waterman score: 979; 43.7% identity (72.1% similar) in 366 aa overlap (16-371:724-1079)
10 20 30 40
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV
:.:.. .. ::.::.:.:.::. . ::. :
XP_016 PQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELV
700 710 720 730 740 750
50 60 70 80 90 100
pF1KB0 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVF
::::: ..::::::::::.::::::. : :..:::. :: : : ... ::..::::
XP_016 ALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVF
760 770 780 790 800 810
110 120 130 140 150 160
pF1KB0 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
.. .::: ::: . ::.:. ..:: :..:..:: : :....::::.: .:.:.. .: .
XP_016 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQI
820 830 840 850 860 870
170 180 190 200 210 220
pF1KB0 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
::::::::: .. ...:.: :::.:.:::::::::::::. : : ::.:. :::..:..
XP_016 KLADFGLARLYN-SEESRP--YTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELF
880 890 900 910 920 930
230 240 250 260 270 280
pF1KB0 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV
:..::.:.: : :: :::.:::: : :::.: . .. .. : .:...... ...
XP_016 TKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFI
940 950 960 970 980
290 300 310 320 330
pF1KB0 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYL
::::.:..:.:::..: ....:. ::. : : :: . : :
XP_016 -PSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCH-----ELW
990 1000 1010 1020 1030 1040
340 350 360 370
pF1KB0 APPRRKGSQ----ITQQSTNQSRNPATTNQTEFERVF
. ::. : . . ... ::. : : :
XP_016 SKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIG
1050 1060 1070 1080 1090 1100
XP_016 LADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEA
1110 1120 1130 1140 1150 1160
>>XP_011523209 (OMIM: 615514) PREDICTED: cyclin-dependen (1262 aa)
initn: 695 init1: 345 opt: 979 Z-score: 366.8 bits: 78.3 E(85289): 1.1e-13
Smith-Waterman score: 979; 43.7% identity (72.1% similar) in 366 aa overlap (16-371:724-1079)
10 20 30 40
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV
:.:.. .. ::.::.:.:.::. . ::. :
XP_011 PQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELV
700 710 720 730 740 750
50 60 70 80 90 100
pF1KB0 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVF
::::: ..::::::::::.::::::. : :..:::. :: : : ... ::..::::
XP_011 ALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVF
760 770 780 790 800 810
110 120 130 140 150 160
pF1KB0 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
.. .::: ::: . ::.:. ..:: :..:..:: : :....::::.: .:.:.. .: .
XP_011 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQI
820 830 840 850 860 870
170 180 190 200 210 220
pF1KB0 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
::::::::: .. ...:.: :::.:.:::::::::::::. : : ::.:. :::..:..
XP_011 KLADFGLARLYN-SEESRP--YTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELF
880 890 900 910 920 930
230 240 250 260 270 280
pF1KB0 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV
:..::.:.: : :: :::.:::: : :::.: . .. .. : .:...... ...
XP_011 TKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFI
940 950 960 970 980
290 300 310 320 330
pF1KB0 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYL
::::.:..:.:::..: ....:. ::. : : :: . : :
XP_011 -PSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCH-----ELW
990 1000 1010 1020 1030 1040
340 350 360 370
pF1KB0 APPRRKGSQ----ITQQSTNQSRNPATTNQTEFERVF
. ::. : . . ... ::. : : :
XP_011 SKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIG
1050 1060 1070 1080 1090 1100
XP_011 LADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEA
1110 1120 1130 1140 1150 1160
>>XP_016880236 (OMIM: 615514) PREDICTED: cyclin-dependen (1393 aa)
initn: 695 init1: 345 opt: 979 Z-score: 366.4 bits: 78.4 E(85289): 1.1e-13
Smith-Waterman score: 979; 43.7% identity (72.1% similar) in 366 aa overlap (16-371:724-1079)
10 20 30 40
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV
:.:.. .. ::.::.:.:.::. . ::. :
XP_016 PQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELV
700 710 720 730 740 750
50 60 70 80 90 100
pF1KB0 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVF
::::: ..::::::::::.::::::. : :..:::. :: : : ... ::..::::
XP_016 ALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVF
760 770 780 790 800 810
110 120 130 140 150 160
pF1KB0 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
.. .::: ::: . ::.:. ..:: :..:..:: : :....::::.: .:.:.. .: .
XP_016 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQI
820 830 840 850 860 870
170 180 190 200 210 220
pF1KB0 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
::::::::: .. ...:.: :::.:.:::::::::::::. : : ::.:. :::..:..
XP_016 KLADFGLARLYN-SEESRP--YTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELF
880 890 900 910 920 930
230 240 250 260 270 280
pF1KB0 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV
:..::.:.: : :: :::.:::: : :::.: . .. .. : .:...... ...
XP_016 TKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFI
940 950 960 970 980
290 300 310 320 330
pF1KB0 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYL
::::.:..:.:::..: ....:. ::. : : :: . : :
XP_016 -PSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCH-----ELW
990 1000 1010 1020 1030 1040
340 350 360 370
pF1KB0 APPRRKGSQ----ITQQSTNQSRNPATTNQTEFERVF
. ::. : . . ... ::. : : :
XP_016 SKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIG
1050 1060 1070 1080 1090 1100
XP_016 LADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEA
1110 1120 1130 1140 1150 1160
>>XP_016880237 (OMIM: 615514) PREDICTED: cyclin-dependen (1393 aa)
initn: 695 init1: 345 opt: 979 Z-score: 366.4 bits: 78.4 E(85289): 1.1e-13
Smith-Waterman score: 979; 43.7% identity (72.1% similar) in 366 aa overlap (16-371:724-1079)
10 20 30 40
pF1KB0 MAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKV
:.:.. .. ::.::.:.:.::. . ::. :
XP_016 PQQPYKKRPKICCPRYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELV
700 710 720 730 740 750
50 60 70 80 90 100
pF1KB0 ALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK--ASPYNRCKGSIYLVF
::::: ..::::::::::.::::::. : :..:::. :: : : ... ::..::::
XP_016 ALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVF
760 770 780 790 800 810
110 120 130 140 150 160
pF1KB0 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL
.. .::: ::: . ::.:. ..:: :..:..:: : :....::::.: .:.:.. .: .
XP_016 EYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQI
820 830 840 850 860 870
170 180 190 200 210 220
pF1KB0 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW
::::::::: .. ...:.: :::.:.:::::::::::::. : : ::.:. :::..:..
XP_016 KLADFGLARLYN-SEESRP--YTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELF
880 890 900 910 920 930
230 240 250 260 270 280
pF1KB0 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV
:..::.:.: : :: :::.:::: : :::.: . .. .. : .:...... ...
XP_016 TKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFI
940 950 960 970 980
290 300 310 320 330
pF1KB0 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFF----WSDPMPSDLKGMLSTHLTSMFEYL
::::.:..:.:::..: ....:. ::. : : :: . : :
XP_016 -PSAALDLLDHMLTLDPSKRCTAEQTLQSDFLKDVELSKMAPPDLPHWQDCH-----ELW
990 1000 1010 1020 1030 1040
340 350 360 370
pF1KB0 APPRRKGSQ----ITQQSTNQSRNPATTNQTEFERVF
. ::. : . . ... ::. : : :
XP_016 SKKRRRQRQSGVVVEEPPPSKTSRKETTSGTSTEPVKNSSPAPPQPAPGKVESGAGDAIG
1050 1060 1070 1080 1090 1100
XP_016 LADITQQLNQSELAVLLNLLQSQTDLSIPQMAQLLNIHSNPEMQQQLEALNQSISALTEA
1110 1120 1130 1140 1150 1160
372 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 02:45:48 2016 done: Mon Nov 7 02:45:49 2016
Total Scan time: 7.520 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]