FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0433, 456 aa
  1>>>pF1KB0433 456 - 456 aa - 456 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5234+/-0.000682; mu= 17.1660+/- 0.041
 mean_var=76.1882+/-15.344, 0's: 0 Z-trim(111.1): 8  B-trim: 249 in 1/51
 Lambda= 0.146937
 statistics sampled from 12119 (12123) to 12119 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.372), width:  16
 Scan time:  2.990

The best scores are:                                      opt bits E(32554)
CCDS9562.1 METTL17 gene_id:64745|Hs108|chr14       ( 456) 3139 674.5  6e-194
CCDS41913.1 METTL17 gene_id:64745|Hs108|chr14      ( 478) 2902 624.3 8.2e-179


>>CCDS9562.1 METTL17 gene_id:64745|Hs108|chr14            (456 aa)
 initn: 3139 init1: 3139 opt: 3139  Z-score: 3595.5  bits: 674.5 E(32554): 6e-194
Smith-Waterman score: 3139; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456)

               10        20        30        40        50        60
pF1KB0 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB0 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH
              370       380       390       400       410       420

              430       440       450      
pF1KB0 GRDLYRCARVSSWGDLLPVLTPSAFPPSTAQDPSES
       ::::::::::::::::::::::::::::::::::::
CCDS95 GRDLYRCARVSSWGDLLPVLTPSAFPPSTAQDPSES
              430       440       450      

>>CCDS41913.1 METTL17 gene_id:64745|Hs108|chr14           (478 aa)
 initn: 2901 init1: 2901 opt: 2902  Z-score: 3323.7  bits: 624.3 E(32554): 8.2e-179
Smith-Waterman score: 2902; 95.5% identity (96.4% similar) in 448 aa overlap (1-446:1-445)

               10        20        30        40        50        60
pF1KB0 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 VRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLEN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 PDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRAR
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 YIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB0 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSW
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB0 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 NKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRH
              370       380       390       400       410       420

              430       440         450                            
pF1KB0 GRDLYRCARVSSWGDLLPVLTPSA--FPPSTAQDPSES                      
       ::  :     ..: :.    .:    ::                                
CCDS41 GR--YGGCDQNQW-DVAGSCSPRQHLFPQGFVSLCPCQLLGRSFTCAYSVCVSSIYGSGS
                430        440       450       460       470       




456 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 14:30:49 2016 done: Sun Nov  6 14:30:49 2016
 Total Scan time:  2.990 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]