Result of FASTA (ccds) for
pFN21AA0005
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0005, 451 aa
1>>>pF1KA0005 451 - 451 aa - 451 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1996+/-0.00087; mu= 12.5311+/- 0.052
mean_var=71.6913+/-14.148, 0's: 0 Z-trim(106.5): 21 B-trim: 0 in 0/52
Lambda= 0.151475
statistics sampled from 9015 (9034) to 9015 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.278), width: 16
Scan time: 3.190
The best scores are: opt bits E(32554)
CCDS56155.1 BZW1 gene_id:9689|Hs108|chr2 ( 451) 2898 642.6 2.4e-184
CCDS56154.1 BZW1 gene_id:9689|Hs108|chr2 ( 423) 2704 600.2 1.3e-171
CCDS56156.1 BZW1 gene_id:9689|Hs108|chr2 ( 419) 2686 596.3 2e-170
CCDS5362.1 BZW2 gene_id:28969|Hs108|chr7 ( 419) 2054 458.2 7.4e-129
>>CCDS56155.1 BZW1 gene_id:9689|Hs108|chr2 (451 aa)
initn: 2898 init1: 2898 opt: 2898 Z-score: 3423.1 bits: 642.6 E(32554): 2.4e-184
Smith-Waterman score: 2898; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451)
10 20 30 40 50 60
pF1KA0 MYGAPGAPAQSASVTVVRSLRRPPPQATGVSFMNNQKQQKPTLSGQRFKTRKRDEKERFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MYGAPGAPAQSASVTVVRSLRRPPPQATGVSFMNNQKQQKPTLSGQRFKTRKRDEKERFD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 PTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLAD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 DMMRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DMMRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 KLAMLTGVLLANGTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KLAMLTGVLLANGTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VSMDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VSMDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 DPFKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DPFKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 AAFTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AAFTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAK
370 380 390 400 410 420
430 440 450
pF1KA0 GKSVFLEQMKKFVEWLKNAEEESESEAEEGD
:::::::::::::::::::::::::::::::
CCDS56 GKSVFLEQMKKFVEWLKNAEEESESEAEEGD
430 440 450
>>CCDS56154.1 BZW1 gene_id:9689|Hs108|chr2 (423 aa)
initn: 2704 init1: 2704 opt: 2704 Z-score: 3194.5 bits: 600.2 E(32554): 1.3e-171
Smith-Waterman score: 2704; 100.0% identity (100.0% similar) in 422 aa overlap (30-451:2-423)
10 20 30 40 50 60
pF1KA0 MYGAPGAPAQSASVTVVRSLRRPPPQATGVSFMNNQKQQKPTLSGQRFKTRKRDEKERFD
:::::::::::::::::::::::::::::::
CCDS56 MVSFMNNQKQQKPTLSGQRFKTRKRDEKERFD
10 20 30
70 80 90 100 110 120
pF1KA0 PTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLAD
40 50 60 70 80 90
130 140 150 160 170 180
pF1KA0 DMMRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DMMRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERN
100 110 120 130 140 150
190 200 210 220 230 240
pF1KA0 KLAMLTGVLLANGTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 KLAMLTGVLLANGTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRK
160 170 180 190 200 210
250 260 270 280 290 300
pF1KA0 VSMDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VSMDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRG
220 230 240 250 260 270
310 320 330 340 350 360
pF1KA0 DPFKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DPFKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLL
280 290 300 310 320 330
370 380 390 400 410 420
pF1KA0 AAFTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AAFTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAK
340 350 360 370 380 390
430 440 450
pF1KA0 GKSVFLEQMKKFVEWLKNAEEESESEAEEGD
:::::::::::::::::::::::::::::::
CCDS56 GKSVFLEQMKKFVEWLKNAEEESESEAEEGD
400 410 420
>>CCDS56156.1 BZW1 gene_id:9689|Hs108|chr2 (419 aa)
initn: 2686 init1: 2686 opt: 2686 Z-score: 3173.3 bits: 596.3 E(32554): 2e-170
Smith-Waterman score: 2686; 100.0% identity (100.0% similar) in 419 aa overlap (33-451:1-419)
10 20 30 40 50 60
pF1KA0 GAPGAPAQSASVTVVRSLRRPPPQATGVSFMNNQKQQKPTLSGQRFKTRKRDEKERFDPT
::::::::::::::::::::::::::::::
CCDS56 MNNQKQQKPTLSGQRFKTRKRDEKERFDPT
10 20 30
70 80 90 100 110 120
pF1KA0 QFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADDM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADDM
40 50 60 70 80 90
130 140 150 160 170 180
pF1KA0 MRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERNKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERNKL
100 110 120 130 140 150
190 200 210 220 230 240
pF1KA0 AMLTGVLLANGTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRKVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AMLTGVLLANGTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRKVS
160 170 180 190 200 210
250 260 270 280 290 300
pF1KA0 MDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRGDP
220 230 240 250 260 270
310 320 330 340 350 360
pF1KA0 FKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FKDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLLAA
280 290 300 310 320 330
370 380 390 400 410 420
pF1KA0 FTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAKGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FTTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAKGK
340 350 360 370 380 390
430 440 450
pF1KA0 SVFLEQMKKFVEWLKNAEEESESEAEEGD
:::::::::::::::::::::::::::::
CCDS56 SVFLEQMKKFVEWLKNAEEESESEAEEGD
400 410
>>CCDS5362.1 BZW2 gene_id:28969|Hs108|chr7 (419 aa)
initn: 1628 init1: 1628 opt: 2054 Z-score: 2426.9 bits: 458.2 E(32554): 7.4e-129
Smith-Waterman score: 2054; 72.6% identity (94.2% similar) in 416 aa overlap (37-449:3-418)
10 20 30 40 50 60
pF1KA0 APAQSASVTVVRSLRRPPPQATGVSFMNNQKQQKPTLSGQRFKTRKRDEKERFDPTQFQD
:.:::.:.:::::::::::::.:.:: :.:
CCDS53 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRD
10 20 30
70 80 90 100 110 120
pF1KA0 CIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADDMMRTD
..:::.:.: ::::::::::..:..:::::::.:::::::::.::::::: :: .:
CCDS53 TLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTK
40 50 60 70 80 90
130 140 150 160 170 180
pF1KA0 V---CVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERNKLA
. :::.:.:: ::.. .::::::::::::::::.::::.::::::::.:::.:..:::
CCDS53 MTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSETEQTKLA
100 110 120 130 140 150
190 200 210 220 230 240
pF1KA0 MLTGVLLANGTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRKVSM
::.:.::.:::: :.::.::....:::::..:.:::::::.:. ::: :.:..::::...
CCDS53 MLSGILLGNGTLPATILTSLFTDSLVKEGIAASFAVKLFKAWMAEKDANSVTSSLRKANL
160 170 180 190 200 210
250 260 270 280 290 300
pF1KA0 DNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRGDPF
:.::.::::.:.:::.::.::::.:::::::...: ::..:.::::::::::..:. :.
CCDS53 DKRLLELFPVNRQSVDHFAKYFTDAGLKELSDFLRVQQSLGTRKELQKELQERLSQECPI
220 230 240 250 260 270
310 320 330 340 350 360
pF1KA0 KDIILYVKEEMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLLAAF
:...::::::::.:..:: .:::..:. .:..::::::::::::::.::::::.::::.:
CCDS53 KEVVLYVKEEMKRNDLPETAVIGLLWTCIMNAVEWNKKEELVAEQALKHLKQYAPLLAVF
280 290 300 310 320 330
370 380 390 400 410 420
pF1KA0 TTQGQSELTLLLKIQEYCYDNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAKGKS
..:::::: :: :.::::::::::::::::::::::::.::::: ::::::.::::::::
CCDS53 SSQGQSELILLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAILKWYKEAHVAKGKS
340 350 360 370 380 390
430 440 450
pF1KA0 VFLEQMKKFVEWLKNAEEESESEAEEGD
:::.:::::::::.:::::::::.::
CCDS53 VFLDQMKKFVEWLQNAEEESESEGEEN
400 410
451 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 04:50:58 2016 done: Mon Nov 7 04:50:58 2016
Total Scan time: 3.190 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]