(Linear) (Six-base) MAPSORT of: KIEE3927.seq Check: 3674 from: 1 to: 1305
KIEE3927.orf
With 182 enzymes: SgfI *
March 22, 2012 16:52 ..
AclI AA'CG_TT
Cuts at: 0 145 1305
Size: 145 1160
AcuI CTGAAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 239 1153 1305
Size: 239 914 152
Fragments arranged by size:
914 239 152
AflII C'TTAA_G
Cuts at: 0 985 1305
Size: 985 320
AflIII A'CryG_T
Cuts at: 0 171 1305
Size: 171 1134
ApoI r'AATT_y
Cuts at: 0 224 1305
Size: 224 1081
BanII G_rGCy'C
Cuts at: 0 167 674 1305
Size: 167 507 631
Fragments arranged by size:
631 507 167
BclI T'GATC_A
Cuts at: 0 579 1305
Size: 579 726
BmrI ACTGGGnnnn_n'
Cuts at: 0 822 1305
Size: 822 483
BpmI CTGGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 572 1305
Size: 572 733
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 23 1305
Size: 23 1282
BsiHKAI G_wGCw'C
Cuts at: 0 167 674 1305
Size: 167 507 631
Fragments arranged by size:
631 507 167
BsmI GAATG_Cn'
Cuts at: 0 199 1305
Size: 199 1106
Bsp1286I G_dGCh'C
Cuts at: 0 167 674 1305
Size: 167 507 631
Fragments arranged by size:
631 507 167
BstAPI GCAn_nnn'nTGC
Cuts at: 0 943 1305
Size: 943 362
BstYI r'GATC_y
Cuts at: 0 566 858 1305
Size: 566 292 447
Fragments arranged by size:
566 447 292
BtgI C'CryG_G
Cuts at: 0 716 1305
Size: 716 589
DraI TTT'AAA
Cuts at: 0 230 1305
Size: 230 1075
EaeI y'GGCC_r
Cuts at: 0 1188 1305
Size: 1188 117
EcoICRI GAG'CTC
Cuts at: 0 165 672 1305
Size: 165 507 633
Fragments arranged by size:
633 507 165
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 239 572 1153 1305
Size: 239 333 581 152
Fragments arranged by size:
581 333 239 152
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'
Cuts at: 0 424 1305
Size: 424 881
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'
Cuts at: 0 789 821 1029 1061 1140 1172 1305
Size: 789 32 208 32 79 32 133
Fragments arranged by size:
789 208 133 79 32 32 32
HincII GTy'rAC
Cuts at: 0 1178 1305
Size: 1178 127
HpaI GTT'AAC
Cuts at: 0 1178 1305
Size: 1178 127
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'
Cuts at: 0 1150 1305
Size: 1150 155
MscI TGG'CCA
Cuts at: 0 1190 1305
Size: 1190 115
MslI CAynn'nnrTG
Cuts at: 0 893 1305
Size: 893 412
MspA1I CmG'CkG
Cuts at: 0 334 601 1173 1305
Size: 334 267 572 132
Fragments arranged by size:
572 334 267 132
NruI TCG'CGA
Cuts at: 0 32 1305
Size: 32 1273
NspI r_CATG'y
Cuts at: 0 175 1305
Size: 175 1130
PciI A'CATG_T
Cuts at: 0 171 1305
Size: 171 1134
PflMI CCAn_nnn'nTGG
Cuts at: 0 505 1305
Size: 505 800
PsrI GAACnnnnnnTACnnnnnnn_nnnnn'
Cuts at: 0 350 382 1305
Size: 350 32 923
Fragments arranged by size:
923 350 32
PvuII CAG'CTG
Cuts at: 0 334 601 1173 1305
Size: 334 267 572 132
Fragments arranged by size:
572 334 267 132
SacI G_AGCT'C
Cuts at: 0 167 674 1305
Size: 167 507 631
Fragments arranged by size:
631 507 167
ScaI AGT'ACT
Cuts at: 0 689 1305
Size: 689 616
SfcI C'TryA_G
Cuts at: 0 841 1305
Size: 841 464
SmlI C'TyrA_G
Cuts at: 0 38 985 1305
Size: 38 947 320
Fragments arranged by size:
947 320 38
SspI AAT'ATT
Cuts at: 0 706 768 1094 1137 1305
Size: 706 62 326 43 168
Fragments arranged by size:
706 326 168 62 43
StuI AGG'CCT
Cuts at: 0 878 1305
Size: 878 427
StyI C'CwwG_G
Cuts at: 0 1053 1305
Size: 1053 252
TatI w'GTAC_w
Cuts at: 0 687 1305
Size: 687 618
XbaI T'CTAG_A
Cuts at: 0 369 1236 1305
Size: 369 867 69
Fragments arranged by size:
867 369 69
XmnI GAAnn'nnTTC
Cuts at: 0 491 1305
Size: 491 814
Enzymes that do cut:
AclI AcuI AflII AflIII ApoI BanII BclI BmrI
BpmI BpuEI BsiHKAI BsmI Bsp1286I BstAPI BstYI BtgI
DraI EaeI EcoICRI Eco57MI FalI Hin4I HincII HpaI
MmeI MscI MslI MspA1I NruI NspI PciI PflMI
PsrI PvuII SacI ScaI SfcI SmlI SspI StuI
StyI TatI XbaI XmnI
Enzymes that do not cut:
AarI AatII AccI Acc65I AfeI AgeI AhdI AleI
AlfI AloI AlwNI ApaI ApaLI AscI AseI AsiSI
AvaI AvrII BaeI BamHI BanI BbeI BbsI BbvCI
BcgI BciVI BfrBI BglI BglII BlpI Bme1580I BmgBI
BmtI BplI Bpu10I BsaI BsaAI BsaBI BsaHI BsaWI
BsaXI BseRI BseYI BsgI BsiEI BsiWI BsmBI BspEI
BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI
BstBI BstEII BstXI BstZ17I Bsu36I BtgZI BtsI ClaI
CspCI DraIII DrdI EagI EarI EciI EcoNI EcoO109I
EcoRI EcoRV FseI FspI FspAI HaeII HindIII KasI
KpnI MfeI MluI NaeI NarI NcoI NdeI NgoMIV
NheI NotI NsiI PacI PasI PfoI PmeI PmlI
PpiI PpuMI PshAI PsiI PspOMI PspXI PstI PvuI
RsrII SacII SalI SanDI SapI SbfI SexAI SfiI
SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI
SwaI TaqII TstI Tth111I XcmI XhoI XmaI ZraI