Result of FASTA (ccds) for
pF1KSDA0893
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0893, 919 aa
1>>>pF1KSDA0893 919 - 919 aa - 919 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.4623+/-0.00118; mu= 6.1651+/- 0.070
mean_var=181.8813+/-38.462, 0's: 0 Z-trim(107.9): 121 B-trim: 403 in 1/51
Lambda= 0.095100
statistics sampled from 9768 (9896) to 9768 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.659), E-opt: 0.2 (0.304), width: 16
Scan time: 3.720
The best scores are: opt bits E(32554)
CCDS44187.1 WDR47 gene_id:22911|Hs108|chr1 ( 919) 6211 865.6 0
CCDS30787.1 WDR47 gene_id:22911|Hs108|chr1 ( 920) 6199 864.0 0
CCDS44186.1 WDR47 gene_id:22911|Hs108|chr1 ( 927) 6175 860.7 0
>>CCDS44187.1 WDR47 gene_id:22911|Hs108|chr1 (919 aa)
initn: 6211 init1: 6211 opt: 6211 Z-score: 4617.3 bits: 865.6 E(32554): 0
Smith-Waterman score: 6211; 100.0% identity (100.0% similar) in 919 aa overlap (1-919:1-919)
10 20 30 40 50 60
pF1KSD MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD WDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 WDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD KLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD DLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD MLENTECHSIYEESPERDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPAKQEKNELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MLENTECHSIYEESPERDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPAKQEKNELR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD DSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRSI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD QKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIHT
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD STPRNPGSTNHIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 STPRNPGSTNHIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVCI
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 NILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKHH
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD KGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD ESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRF
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD WDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 WDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQD
850 860 870 880 890 900
910
pF1KSD LSFLSSSADRTVTLWTYNG
:::::::::::::::::::
CCDS44 LSFLSSSADRTVTLWTYNG
910
>>CCDS30787.1 WDR47 gene_id:22911|Hs108|chr1 (920 aa)
initn: 3689 init1: 3689 opt: 6199 Z-score: 4608.4 bits: 864.0 E(32554): 0
Smith-Waterman score: 6199; 99.9% identity (99.9% similar) in 920 aa overlap (1-919:1-920)
10 20 30 40 50 60
pF1KSD MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD WDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 WDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 LHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD KLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 KLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD DLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 DLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSPYPSSPMR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGVQNLSRSL
310 320 330 340 350 360
370 380 390 400 410
pF1KSD MLENTECHSIYEESPER-DTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPAKQEKNEL
::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS30 MLENTECHSIYEESPERSDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPAKQEKNEL
370 380 390 400 410 420
420 430 440 450 460 470
pF1KSD RDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 RDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRS
430 440 450 460 470 480
480 490 500 510 520 530
pF1KSD IQKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 IQKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIH
490 500 510 520 530 540
540 550 560 570 580 590
pF1KSD TSTPRNPGSTNHIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 TSTPRNPGSTNHIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVC
550 560 570 580 590 600
600 610 620 630 640 650
pF1KSD INILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 INILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKH
610 620 630 640 650 660
660 670 680 690 700 710
pF1KSD HKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 HKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEG
670 680 690 700 710 720
720 730 740 750 760 770
pF1KSD PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVR
730 740 750 760 770 780
780 790 800 810 820 830
pF1KSD FWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 FWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYH
790 800 810 820 830 840
840 850 860 870 880 890
pF1KSD PHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 PHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQ
850 860 870 880 890 900
900 910
pF1KSD DLSFLSSSADRTVTLWTYNG
::::::::::::::::::::
CCDS30 DLSFLSSSADRTVTLWTYNG
910 920
>>CCDS44186.1 WDR47 gene_id:22911|Hs108|chr1 (927 aa)
initn: 4389 init1: 3689 opt: 6175 Z-score: 4590.6 bits: 860.7 E(32554): 0
Smith-Waterman score: 6175; 99.1% identity (99.1% similar) in 927 aa overlap (1-919:1-927)
10 20 30 40 50 60
pF1KSD MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQ
10 20 30 40 50 60
70 80 90 100 110
pF1KSD WDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQH-------LEFT
::::::::::::::::::::::::::::::::::::::::::::::::: ::::
CCDS44 WDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHVRFLFLKLEFT
70 80 90 100 110 120
120 130 140 150 160 170
pF1KSD MQEAVQCLHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MQEAVQCLHALEEYCPSKDDYSKLCLLLTLPRLTNHAEFKDWNPSTARVHCFEEACVMVA
130 140 150 160 170 180
180 190 200 210 220 230
pF1KSD EFIPADRKLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EFIPADRKLSEAGFKASNNRLFQLVMKGLLYECCVEFCQSKATGEEITESEVLLGIDLLC
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD GNGCDDLDLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GNGCDDLDLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAYADLLTPLISKLSP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KSD YPSSPMRRPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 YPSSPMRRPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHYPGV
310 320 330 340 350 360
360 370 380 390 400 410
pF1KSD QNLSRSLMLENTECHSIYEESPER-DTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPA
:::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::
CCDS44 QNLSRSLMLENTECHSIYEESPERSDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPA
370 380 390 400 410 420
420 430 440 450 460 470
pF1KSD KQEKNELRDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 KQEKNELRDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLT
430 440 450 460 470 480
480 490 500 510 520 530
pF1KSD EQFLNRSIQKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EQFLNRSIQKLGELNIGMDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLT
490 500 510 520 530 540
540 550 560 570 580 590
pF1KSD HDASNIHTSTPRNPGSTNHIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 HDASNIHTSTPRNPGSTNHIPFLEESPCGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDK
550 560 570 580 590 600
600 610 620 630 640 650
pF1KSD SKKQFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SKKQFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVV
610 620 630 640 650 660
660 670 680 690 700 710
pF1KSD RFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIR
670 680 690 700 710 720
720 730 740 750 760 770
pF1KSD DLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 DLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASG
730 740 750 760 770 780
780 790 800 810 820 830
pF1KSD SQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGG
790 800 810 820 830 840
840 850 860 870 880 890
pF1KSD RMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVI
850 860 870 880 890 900
900 910
pF1KSD QCRWHTQDLSFLSSSADRTVTLWTYNG
:::::::::::::::::::::::::::
CCDS44 QCRWHTQDLSFLSSSADRTVTLWTYNG
910 920
919 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:00:20 2016 done: Thu Nov 3 04:00:21 2016
Total Scan time: 3.720 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]