Result of FASTA (omim) for
pF1KSDA0441
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0441, 697 aa
1>>>pF1KSDA0441 697 - 697 aa - 697 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6974+/-0.00046; mu= 11.7943+/- 0.029
mean_var=301.6984+/-65.147, 0's: 0 Z-trim(119.8): 1991 B-trim: 1906 in 2/55
Lambda= 0.073839
statistics sampled from 31867 (34240) to 31867 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.401), width: 16
Scan time: 11.480
The best scores are: opt bits E(85289)
NP_055612 (OMIM: 614064,614069) zinc finger and BT ( 697) 4679 512.9 1.7e-144
NP_001157785 (OMIM: 614064,614069) zinc finger and ( 333) 2102 237.9 4.9e-62
NP_001252529 (OMIM: 601856) zinc finger protein 21 ( 503) 863 106.1 3.3e-22
NP_001252528 (OMIM: 601856) zinc finger protein 21 ( 555) 863 106.2 3.5e-22
NP_942152 (OMIM: 601856) zinc finger protein 211 i ( 564) 863 106.2 3.6e-22
NP_006376 (OMIM: 601856) zinc finger protein 211 i ( 577) 863 106.2 3.6e-22
NP_001252527 (OMIM: 601856) zinc finger protein 21 ( 616) 863 106.3 3.7e-22
NP_001309235 (OMIM: 601856) zinc finger protein 21 ( 627) 863 106.3 3.8e-22
NP_001252526 (OMIM: 601856) zinc finger protein 21 ( 629) 863 106.3 3.8e-22
XP_005272399 (OMIM: 601262) PREDICTED: zinc finger ( 542) 849 104.7 9.8e-22
XP_005272398 (OMIM: 601262) PREDICTED: zinc finger ( 682) 849 104.8 1.1e-21
XP_011515600 (OMIM: 601262) PREDICTED: zinc finger ( 682) 849 104.8 1.1e-21
NP_001025147 (OMIM: 601262) zinc finger protein 16 ( 682) 849 104.8 1.1e-21
NP_008889 (OMIM: 601262) zinc finger protein 16 [H ( 682) 849 104.8 1.1e-21
XP_016882745 (OMIM: 606740) PREDICTED: zinc finger ( 349) 842 103.7 1.3e-21
XP_016882744 (OMIM: 606740) PREDICTED: zinc finger ( 349) 842 103.7 1.3e-21
XP_016882743 (OMIM: 606740) PREDICTED: zinc finger ( 349) 842 103.7 1.3e-21
XP_016882742 (OMIM: 606740) PREDICTED: zinc finger ( 349) 842 103.7 1.3e-21
XP_016882740 (OMIM: 606740) PREDICTED: zinc finger ( 349) 842 103.7 1.3e-21
XP_016882739 (OMIM: 606740) PREDICTED: zinc finger ( 349) 842 103.7 1.3e-21
NP_001275690 (OMIM: 606740) zinc finger protein 18 ( 349) 842 103.7 1.3e-21
NP_001275691 (OMIM: 606740) zinc finger protein 18 ( 349) 842 103.7 1.3e-21
NP_001275689 (OMIM: 606740) zinc finger protein 18 ( 349) 842 103.7 1.3e-21
XP_016882741 (OMIM: 606740) PREDICTED: zinc finger ( 349) 842 103.7 1.3e-21
XP_005272572 (OMIM: 616290) PREDICTED: zinc finger (1059) 848 105.0 1.5e-21
NP_149350 (OMIM: 616290) zinc finger protein 658 [ (1059) 848 105.0 1.5e-21
XP_016870103 (OMIM: 616290) PREDICTED: zinc finger (1059) 848 105.0 1.5e-21
XP_011543981 (OMIM: 616290) PREDICTED: zinc finger (1059) 848 105.0 1.5e-21
NP_001304845 (OMIM: 616290) zinc finger protein 65 (1059) 848 105.0 1.5e-21
XP_005259469 (OMIM: 604749) PREDICTED: zinc finger ( 734) 844 104.4 1.7e-21
NP_004225 (OMIM: 604749) zinc finger protein 235 [ ( 738) 844 104.4 1.7e-21
NP_003443 (OMIM: 603132) zinc finger protein 189 i ( 626) 842 104.0 1.8e-21
NP_001278562 (OMIM: 606740) zinc finger protein 18 ( 665) 842 104.1 1.8e-21
NP_001265438 (OMIM: 606740) zinc finger protein 18 ( 665) 842 104.1 1.8e-21
NP_001265437 (OMIM: 606740) zinc finger protein 18 ( 667) 842 104.1 1.8e-21
NP_001275688 (OMIM: 606740) zinc finger protein 18 ( 691) 842 104.1 1.9e-21
NP_037388 (OMIM: 606740) zinc finger protein 180 i ( 692) 842 104.1 1.9e-21
XP_011525582 (OMIM: 606740) PREDICTED: zinc finger ( 734) 842 104.1 1.9e-21
XP_011524764 (OMIM: 616798) PREDICTED: zinc finger ( 771) 841 104.1 2.2e-21
XP_011524765 (OMIM: 616798) PREDICTED: zinc finger ( 859) 841 104.1 2.3e-21
NP_065879 (OMIM: 616798) zinc finger protein 28 ho ( 868) 841 104.1 2.3e-21
XP_011517301 (OMIM: 603132) PREDICTED: zinc finger ( 575) 837 103.5 2.5e-21
XP_006717344 (OMIM: 603132) PREDICTED: zinc finger ( 584) 837 103.5 2.5e-21
XP_011517300 (OMIM: 603132) PREDICTED: zinc finger ( 584) 837 103.5 2.5e-21
XP_006717343 (OMIM: 603132) PREDICTED: zinc finger ( 584) 837 103.5 2.5e-21
XP_016870610 (OMIM: 603132) PREDICTED: zinc finger ( 584) 837 103.5 2.5e-21
NP_932094 (OMIM: 603132) zinc finger protein 189 i ( 584) 837 103.5 2.5e-21
NP_001265161 (OMIM: 603132) zinc finger protein 18 ( 611) 837 103.5 2.5e-21
NP_001265160 (OMIM: 603132) zinc finger protein 18 ( 612) 837 103.5 2.5e-21
XP_016882569 (OMIM: 194545) PREDICTED: endothelial ( 489) 832 102.8 3.2e-21
>>NP_055612 (OMIM: 614064,614069) zinc finger and BTB do (697 aa)
initn: 4679 init1: 4679 opt: 4679 Z-score: 2715.1 bits: 512.9 E(85289): 1.7e-144
Smith-Waterman score: 4679; 99.9% identity (99.9% similar) in 697 aa overlap (1-697:1-697)
10 20 30 40 50 60
pF1KSD MAETSPEPSGQLVVHSDAHSDTVLASFEDQRKKGFLCDITLIVENVHFRAHKALLAASSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MAETSPEPSGQLVVHSDAHSDTVLASFEDQRKKGFLCDITLIVENVHFRAHKALLAASSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD YFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLHASEKSTEQILATAQFLKVYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 YFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLHASEKSTEQILATAQFLKVYD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LVKAYTDFQNNHSSPKPTTLNTAGAPVVVIPNKKNDPPKRKRGRPKKVNTLQEEKSELAA
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_055 LVKAYTDFQNNHSSPKPTTLNTAGAPVVVISNKKNDPPKRKRGRPKKVNTLQEEKSELAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD EEEIQLRVNNSVQNRQNFVVKGDSGVLNEQIAAKEKEESEPTCEPSREEEMPVEKDENYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EEEIQLRVNNSVQNRQNFVVKGDSGVLNEQIAAKEKEESEPTCEPSREEEMPVEKDENYD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PKTEDGQASQSRYSKRRIWRSVKLKDYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PKTEDGQASQSRYSKRRIWRSVKLKDYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD KVFKYNHFLAIHQRSHTGERPFKCNECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KVFKYNHFLAIHQRSHTGERPFKCNECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD TKHSLLEHMSLHSGQKSFTCDQCGKYFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TKHSLLEHMSLHSGQKSFTCDQCGKYFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQ
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD LKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LKKHLRTHTGEKPFTCEICGKSFTAKSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRH
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD CILHTGKKPFSCPECNLQFARLDNLKAHLKIHSKEKHASDASSISGSSNTEEVRNILQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 CILHTGKKPFSCPECNLQFARLDNLKAHLKIHSKEKHASDASSISGSSNTEEVRNILQLQ
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PYQLSTSGEQEIQLLVTDSVHNINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PYQLSTSGEQEIQLLVTDSVHNINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPE
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD QLQNLILSAQQEQTEHIQSLNMIESQMGPSQTEPVHVITLSKETLEHLHAHQEQTEELHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QLQNLILSAQQEQTEHIQSLNMIESQMGPSQTEPVHVITLSKETLEHLHAHQEQTEELHL
610 620 630 640 650 660
670 680 690
pF1KSD ATSTSDPAQHLQLTQEPGPPPPTHHVPQPTPLGQEQS
:::::::::::::::::::::::::::::::::::::
NP_055 ATSTSDPAQHLQLTQEPGPPPPTHHVPQPTPLGQEQS
670 680 690
>>NP_001157785 (OMIM: 614064,614069) zinc finger and BTB (333 aa)
initn: 2101 init1: 2101 opt: 2102 Z-score: 1234.8 bits: 237.9 E(85289): 4.9e-62
Smith-Waterman score: 2102; 97.9% identity (98.5% similar) in 327 aa overlap (1-327:1-326)
10 20 30 40 50 60
pF1KSD MAETSPEPSGQLVVHSDAHSDTVLASFEDQRKKGFLCDITLIVENVHFRAHKALLAASSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAETSPEPSGQLVVHSDAHSDTVLASFEDQRKKGFLCDITLIVENVHFRAHKALLAASSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD YFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLHASEKSTEQILATAQFLKVYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YFSMMFAEEGEIGQSIYMLEGMVADTFGILLEFIYTGYLHASEKSTEQILATAQFLKVYD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LVKAYTDFQNNHSSPKPTTLNTAGAPVVVIPNKKNDPPKRKRGRPKKVNTLQEEKSELAA
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_001 LVKAYTDFQNNHSSPKPTTLNTAGAPVVVISNKKNDPPKRKRGRPKKVNTLQEEKSELAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD EEEIQLRVNNSVQNRQNFVVKGDSGVLNEQIAAKEKEESEPTCEPSREEEMPVEKDENYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEIQLRVNNSVQNRQNFVVKGDSGVLNEQIAAKEKEESEPTCEPSREEEMPVEKDENYD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD PKTEDGQASQSRYSKRRIWRSVKLKDYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKTEDGQASQSRYSKRRIWRSVKLKDYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD KVFKYNHFLAIHQRSHTGERPFKCNECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALT
::::::::::::::::::. :: . :
NP_001 KVFKYNHFLAIHQRSHTGNDVFKAD-CSVLQNWE
310 320 330
>>NP_001252529 (OMIM: 601856) zinc finger protein 211 is (503 aa)
initn: 843 init1: 843 opt: 863 Z-score: 519.6 bits: 106.1 E(85289): 3.3e-22
Smith-Waterman score: 863; 45.7% identity (70.5% similar) in 258 aa overlap (296-549:226-483)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..::: : : . :::: ::::::. :
NP_001 FECSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACP
200 210 220 230 240 250
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::.:.: .::. : ..::::::: : :.:... . .:..: .:.:.. . :..:::
NP_001 ECGKSFSQIYSLNSHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGK
260 270 280 290 300 310
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
:::: .: : :::::. ::..: ..: :.: .: : ::::.:. : :::::
NP_001 SFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQ
320 330 340 350 360 370
450 460 470 480 490 500
pF1KSD KSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRHCILHTGKKPFSCPECNLQFARLDNL
.::...: ..: ::.:: :: :::::: :: . : .:::..: : ::. .:. .::
NP_001 SSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNL
380 390 400 410 420 430
510 520 530 540 550 560
pF1KSD KAHLKIHSKEK--HASD-ASSISGSSNTEEVRNI-LQLQPYQLSTSGEQEIQLLVTDSVH
::..:. :. . :. ..:.: ::. . : . .::: : :.
NP_001 IKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQ
440 450 460 470 480 490
570 580 590 600 610 620
pF1KSD NINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQEQTEHIQSLN
NP_001 RVHIGEKP
500
>>NP_001252528 (OMIM: 601856) zinc finger protein 211 is (555 aa)
initn: 843 init1: 843 opt: 863 Z-score: 519.2 bits: 106.2 E(85289): 3.5e-22
Smith-Waterman score: 863; 45.7% identity (70.5% similar) in 258 aa overlap (296-549:278-535)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..::: : : . :::: ::::::. :
NP_001 FECSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACP
250 260 270 280 290 300
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::.:.: .::. : ..::::::: : :.:... . .:..: .:.:.. . :..:::
NP_001 ECGKSFSQIYSLNSHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGK
310 320 330 340 350 360
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
:::: .: : :::::. ::..: ..: :.: .: : ::::.:. : :::::
NP_001 SFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQ
370 380 390 400 410 420
450 460 470 480 490 500
pF1KSD KSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRHCILHTGKKPFSCPECNLQFARLDNL
.::...: ..: ::.:: :: :::::: :: . : .:::..: : ::. .:. .::
NP_001 SSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNL
430 440 450 460 470 480
510 520 530 540 550 560
pF1KSD KAHLKIHSKEK--HASD-ASSISGSSNTEEVRNI-LQLQPYQLSTSGEQEIQLLVTDSVH
::..:. :. . :. ..:.: ::. . : . .::: : :.
NP_001 IKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQ
490 500 510 520 530 540
570 580 590 600 610 620
pF1KSD NINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQEQTEHIQSLN
NP_001 RVHIGEKP
550
>>NP_942152 (OMIM: 601856) zinc finger protein 211 isofo (564 aa)
initn: 843 init1: 843 opt: 863 Z-score: 519.1 bits: 106.2 E(85289): 3.6e-22
Smith-Waterman score: 863; 45.7% identity (70.5% similar) in 258 aa overlap (296-549:287-544)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..::: : : . :::: ::::::. :
NP_942 FECSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACP
260 270 280 290 300 310
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::.:.: .::. : ..::::::: : :.:... . .:..: .:.:.. . :..:::
NP_942 ECGKSFSQIYSLNSHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGK
320 330 340 350 360 370
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
:::: .: : :::::. ::..: ..: :.: .: : ::::.:. : :::::
NP_942 SFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQ
380 390 400 410 420 430
450 460 470 480 490 500
pF1KSD KSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRHCILHTGKKPFSCPECNLQFARLDNL
.::...: ..: ::.:: :: :::::: :: . : .:::..: : ::. .:. .::
NP_942 SSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNL
440 450 460 470 480 490
510 520 530 540 550 560
pF1KSD KAHLKIHSKEK--HASD-ASSISGSSNTEEVRNI-LQLQPYQLSTSGEQEIQLLVTDSVH
::..:. :. . :. ..:.: ::. . : . .::: : :.
NP_942 IKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQ
500 510 520 530 540 550
570 580 590 600 610 620
pF1KSD NINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQEQTEHIQSLN
NP_942 RVHIGEKP
560
>>NP_006376 (OMIM: 601856) zinc finger protein 211 isofo (577 aa)
initn: 843 init1: 843 opt: 863 Z-score: 519.0 bits: 106.2 E(85289): 3.6e-22
Smith-Waterman score: 863; 45.7% identity (70.5% similar) in 258 aa overlap (296-549:300-557)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..::: : : . :::: ::::::. :
NP_006 FECSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACP
270 280 290 300 310 320
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::.:.: .::. : ..::::::: : :.:... . .:..: .:.:.. . :..:::
NP_006 ECGKSFSQIYSLNSHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGK
330 340 350 360 370 380
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
:::: .: : :::::. ::..: ..: :.: .: : ::::.:. : :::::
NP_006 SFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQ
390 400 410 420 430 440
450 460 470 480 490 500
pF1KSD KSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRHCILHTGKKPFSCPECNLQFARLDNL
.::...: ..: ::.:: :: :::::: :: . : .:::..: : ::. .:. .::
NP_006 SSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNL
450 460 470 480 490 500
510 520 530 540 550 560
pF1KSD KAHLKIHSKEK--HASD-ASSISGSSNTEEVRNI-LQLQPYQLSTSGEQEIQLLVTDSVH
::..:. :. . :. ..:.: ::. . : . .::: : :.
NP_006 IKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQ
510 520 530 540 550 560
570 580 590 600 610 620
pF1KSD NINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQEQTEHIQSLN
NP_006 RVHIGEKP
570
>>NP_001252527 (OMIM: 601856) zinc finger protein 211 is (616 aa)
initn: 843 init1: 843 opt: 863 Z-score: 518.7 bits: 106.3 E(85289): 3.7e-22
Smith-Waterman score: 863; 45.7% identity (70.5% similar) in 258 aa overlap (296-549:339-596)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..::: : : . :::: ::::::. :
NP_001 FECSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACP
310 320 330 340 350 360
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::.:.: .::. : ..::::::: : :.:... . .:..: .:.:.. . :..:::
NP_001 ECGKSFSQIYSLNSHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGK
370 380 390 400 410 420
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
:::: .: : :::::. ::..: ..: :.: .: : ::::.:. : :::::
NP_001 SFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQ
430 440 450 460 470 480
450 460 470 480 490 500
pF1KSD KSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRHCILHTGKKPFSCPECNLQFARLDNL
.::...: ..: ::.:: :: :::::: :: . : .:::..: : ::. .:. .::
NP_001 SSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNL
490 500 510 520 530 540
510 520 530 540 550 560
pF1KSD KAHLKIHSKEK--HASD-ASSISGSSNTEEVRNI-LQLQPYQLSTSGEQEIQLLVTDSVH
::..:. :. . :. ..:.: ::. . : . .::: : :.
NP_001 IKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQ
550 560 570 580 590 600
570 580 590 600 610 620
pF1KSD NINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQEQTEHIQSLN
NP_001 RVHIGEKP
610
>>NP_001309235 (OMIM: 601856) zinc finger protein 211 [H (627 aa)
initn: 843 init1: 843 opt: 863 Z-score: 518.6 bits: 106.3 E(85289): 3.8e-22
Smith-Waterman score: 863; 45.7% identity (70.5% similar) in 258 aa overlap (296-549:350-607)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..::: : : . :::: ::::::. :
NP_001 FECSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACP
320 330 340 350 360 370
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::.:.: .::. : ..::::::: : :.:... . .:..: .:.:.. . :..:::
NP_001 ECGKSFSQIYSLNSHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGK
380 390 400 410 420 430
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
:::: .: : :::::. ::..: ..: :.: .: : ::::.:. : :::::
NP_001 SFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQ
440 450 460 470 480 490
450 460 470 480 490 500
pF1KSD KSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRHCILHTGKKPFSCPECNLQFARLDNL
.::...: ..: ::.:: :: :::::: :: . : .:::..: : ::. .:. .::
NP_001 SSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNL
500 510 520 530 540 550
510 520 530 540 550 560
pF1KSD KAHLKIHSKEK--HASD-ASSISGSSNTEEVRNI-LQLQPYQLSTSGEQEIQLLVTDSVH
::..:. :. . :. ..:.: ::. . : . .::: : :.
NP_001 IKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQ
560 570 580 590 600 610
570 580 590 600 610 620
pF1KSD NINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQEQTEHIQSLN
NP_001 RVHIGEKP
620
>>NP_001252526 (OMIM: 601856) zinc finger protein 211 is (629 aa)
initn: 843 init1: 843 opt: 863 Z-score: 518.6 bits: 106.3 E(85289): 3.8e-22
Smith-Waterman score: 863; 45.7% identity (70.5% similar) in 258 aa overlap (296-549:352-609)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..::: : : . :::: ::::::. :
NP_001 FECSKCGKACTRRCNLIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACP
330 340 350 360 370 380
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::.:.: .::. : ..::::::: : :.:... . .:..: .:.:.. . :..:::
NP_001 ECGKSFSQIYSLNSHRKVHTGERPYECGECGKSFSQRSNLMQHRRVHTGERPYECSECGK
390 400 410 420 430 440
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
:::: .: : :::::. ::..: ..: :.: .: : ::::.:. : :::::
NP_001 SFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYECSKCGKSFKQ
450 460 470 480 490 500
450 460 470 480 490 500
pF1KSD KSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRHCILHTGKKPFSCPECNLQFARLDNL
.::...: ..: ::.:: :: :::::: :: . : .:::..: : ::. .:. .::
NP_001 SSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPVECSECSKSFSCKSNL
510 520 530 540 550 560
510 520 530 540 550 560
pF1KSD KAHLKIHSKEK--HASD-ASSISGSSNTEEVRNI-LQLQPYQLSTSGEQEIQLLVTDSVH
::..:. :. . :. ..:.: ::. . : . .::: : :.
NP_001 IKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSVLIQHQ
570 580 590 600 610 620
570 580 590 600 610 620
pF1KSD NINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQEQTEHIQSLN
NP_001 RVHIGEKP
>>XP_005272399 (OMIM: 601262) PREDICTED: zinc finger pro (542 aa)
initn: 3755 init1: 826 opt: 849 Z-score: 511.2 bits: 104.7 E(85289): 9.8e-22
Smith-Waterman score: 849; 43.1% identity (67.9% similar) in 274 aa overlap (296-562:155-428)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..:::.:. : : ::.:: .:.:..::
XP_005 YQCSECGKAFRGHSDFSRHQSHHSSERPYMCNECGKAFSQNSSLKKHQKSHMSEKPYECN
130 140 150 160 170 180
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::.: .. .: : :.:.::.::.:. :.::. . .:..: :.:.: : : .:::
XP_005 ECGKAFRRSSNLIQHQRIHSGEKPYVCSECGKAFRRSSNLIKHHRTHTGEKPFECGECGK
190 200 210 220 230 240
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
:::. .:..: :::::.. ::.:: . : ::.: :: :.::::::. : :::.:.
XP_005 AFSQSAHLRKHQRVHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQ
250 260 270 280 290 300
450 460 470 480 490 500
pF1KSD KSSLQTHIRIHRGEKPYSCGICGKSFSDSSAKRRHCILHTGKKPFSCPECNLQFARLDNL
.::: : ::: ::::. :..:::.:: ::. :.: :.:::.::. : :. :.. . :
XP_005 SSSLIQHRRIHTGEKPHVCNVCGKAFSYSSVLRKHQIIHTGEKPYRCSVCGKAFSHSSAL
310 320 330 340 350 360
510 520 530 540 550
pF1KSD KAHLKIHSKEK----HASDASSISGSSNTEEVRNILQLQPYQLSTSGE---QEIQLLVTD
: .:. .: : . .:. . : .::. . :. : :. .
XP_005 IQHQGVHTGDKPYACHECGKTFGRSSNLILHQRVHTGEKPYECTECGKTFSQSSTLIQHQ
370 380 390 400 410 420
560 570 580 590 600 610
pF1KSD SVHNINFMPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQEQTEHIQ
.::
XP_005 RIHNGLKPHECNQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHT
430 440 450 460 470 480
>--
initn: 1034 init1: 395 opt: 395 Z-score: 249.8 bits: 56.3 E(85289): 3.5e-07
Smith-Waterman score: 395; 47.2% identity (70.8% similar) in 106 aa overlap (296-401:435-540)
270 280 290 300 310 320
pF1KSD DYKLVGDQEDHGSAKRICGRRKRPGGPEARCKDCGKVFKYNHFLAIHQRSHTGERPFKCN
:..:::.:. . : ::. ::::.:. :
XP_005 YECTECGKTFSQSSTLIQHQRIHNGLKPHECNQCGKAFNRSSNLIHHQKVHTGEKPYTCV
410 420 430 440 450 460
330 340 350 360 370 380
pF1KSD ECGKGFAQKHSLQVHTRMHTGERPYTCTVCSKALTTKHSLLEHMSLHSGQKSFTCDQCGK
::::::.:. : : .::::::: :. :.::.. . :..:. .:.: : . : :::
XP_005 ECGKGFSQSSHLIQHQIIHTGERPYKCSECGKAFSQRSVLIQHQRIHTGVKPYDCAACGK
470 480 490 500 510 520
390 400 410 420 430 440
pF1KSD YFSQNRQLKSHYRVHTGHSLPECKDCHRKFMDVSQLKKHLRTHTGEKPFTCEICGKSFTA
::: .: .: .::
XP_005 AFSQRSKLIKHQLIHTRE
530 540
697 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 01:44:14 2016 done: Thu Nov 3 01:44:16 2016
Total Scan time: 11.480 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]