Result of FASTA (omim) for
pF1KSDA0426
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA0426, 604 aa
1>>>pF1KSDA0426 604 - 604 aa - 604 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1971+/-0.000646; mu= 7.2133+/- 0.040
mean_var=318.8704+/-64.635, 0's: 0 Z-trim(114.9): 2033 B-trim: 96 in 1/49
Lambda= 0.071824
statistics sampled from 22763 (25075) to 22763 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.621), E-opt: 0.2 (0.294), width: 16
Scan time: 10.090
The best scores are: opt bits E(85289)
XP_016867017 (OMIM: 603978) PREDICTED: zinc finger ( 611) 3983 427.6 5.9e-119
XP_011513316 (OMIM: 603978) PREDICTED: zinc finger ( 611) 3983 427.6 5.9e-119
XP_011513317 (OMIM: 603978) PREDICTED: zinc finger ( 611) 3983 427.6 5.9e-119
NP_001156863 (OMIM: 603978) zinc finger and SCAN d ( 611) 3983 427.6 5.9e-119
XP_011513319 (OMIM: 603978) PREDICTED: zinc finger ( 565) 3980 427.3 7e-119
NP_001128688 (OMIM: 610794) zinc finger and SCAN d ( 406) 1461 166.0 2.2e-40
XP_011513114 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
XP_011513110 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
NP_001128687 (OMIM: 610794) zinc finger and SCAN d ( 406) 1461 166.0 2.2e-40
XP_011513111 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
XP_011513113 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
NP_112161 (OMIM: 610794) zinc finger and SCAN doma ( 406) 1461 166.0 2.2e-40
NP_001230170 (OMIM: 610794) zinc finger and SCAN d ( 406) 1461 166.0 2.2e-40
XP_016866685 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
XP_011513115 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
XP_011513109 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
NP_665916 (OMIM: 610794) zinc finger and SCAN doma ( 406) 1461 166.0 2.2e-40
XP_005249353 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
XP_005249352 (OMIM: 610794) PREDICTED: zinc finger ( 406) 1461 166.0 2.2e-40
NP_003420 (OMIM: 603899) zinc finger protein 85 is ( 595) 1428 162.8 2.9e-39
XP_016882723 (OMIM: 603899) PREDICTED: zinc finger ( 518) 1425 162.5 3.3e-39
NP_001243102 (OMIM: 603899) zinc finger protein 85 ( 531) 1425 162.5 3.4e-39
XP_011526566 (OMIM: 603899) PREDICTED: zinc finger ( 536) 1425 162.5 3.4e-39
NP_001243100 (OMIM: 603899) zinc finger protein 85 ( 625) 1425 162.6 3.7e-39
XP_011526565 (OMIM: 603899) PREDICTED: zinc finger ( 640) 1425 162.6 3.8e-39
NP_001309067 (OMIM: 600398) zinc finger protein 16 ( 782) 1419 162.1 6.5e-39
NP_001309068 (OMIM: 600398) zinc finger protein 16 ( 782) 1419 162.1 6.5e-39
NP_001309066 (OMIM: 600398) zinc finger protein 16 ( 782) 1419 162.1 6.5e-39
NP_001309062 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
NP_001309060 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
NP_001096073 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
NP_001309059 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
NP_001309065 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
XP_016882935 (OMIM: 600398) PREDICTED: zinc finger ( 818) 1419 162.1 6.7e-39
NP_001309063 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
NP_001309064 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
NP_001309057 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
NP_150630 (OMIM: 600398) zinc finger protein 160 i ( 818) 1419 162.1 6.7e-39
NP_942596 (OMIM: 600398) zinc finger protein 160 i ( 818) 1419 162.1 6.7e-39
NP_001309058 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
NP_001309061 (OMIM: 600398) zinc finger protein 16 ( 818) 1419 162.1 6.7e-39
XP_016882934 (OMIM: 600398) PREDICTED: zinc finger ( 837) 1419 162.1 6.8e-39
XP_011513163 (OMIM: 602277) PREDICTED: zinc finger ( 675) 1416 161.7 7.4e-39
NP_001305822 (OMIM: 602277) zinc finger protein 18 ( 675) 1416 161.7 7.4e-39
NP_001305820 (OMIM: 602277) zinc finger protein 18 ( 751) 1416 161.7 7.9e-39
NP_001305821 (OMIM: 602277) zinc finger protein 18 ( 751) 1416 161.7 7.9e-39
NP_009080 (OMIM: 602277) zinc finger protein 184 i ( 751) 1416 161.7 7.9e-39
XP_005272399 (OMIM: 601262) PREDICTED: zinc finger ( 542) 1385 158.3 6e-38
XP_016881868 (OMIM: 613904) PREDICTED: zinc finger ( 527) 1384 158.2 6.4e-38
XP_016881871 (OMIM: 613904) PREDICTED: zinc finger ( 527) 1384 158.2 6.4e-38
>>XP_016867017 (OMIM: 603978) PREDICTED: zinc finger and (611 aa)
initn: 6197 init1: 3983 opt: 3983 Z-score: 2256.6 bits: 427.6 E(85289): 5.9e-119
Smith-Waterman score: 3983; 99.5% identity (99.6% similar) in 569 aa overlap (1-569:1-569)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IQHQRIHTGEKPYQCDECGKAFRQRKKTSYKEILLKNHSEPQAGVNLLLSSLIPEWQSCF
:::::::::::::::::::::::::. :
XP_016 IQHQRIHTGEKPYQCDECGKAFRQRSDLSKHQRIHNRRGTYVCKECGKSFRQNSALTQHQ
550 560 570 580 590 600
>>XP_011513316 (OMIM: 603978) PREDICTED: zinc finger and (611 aa)
initn: 6197 init1: 3983 opt: 3983 Z-score: 2256.6 bits: 427.6 E(85289): 5.9e-119
Smith-Waterman score: 3983; 99.5% identity (99.6% similar) in 569 aa overlap (1-569:1-569)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IQHQRIHTGEKPYQCDECGKAFRQRKKTSYKEILLKNHSEPQAGVNLLLSSLIPEWQSCF
:::::::::::::::::::::::::. :
XP_011 IQHQRIHTGEKPYQCDECGKAFRQRSDLSKHQRIHNRRGTYVCKECGKSFRQNSALTQHQ
550 560 570 580 590 600
>>XP_011513317 (OMIM: 603978) PREDICTED: zinc finger and (611 aa)
initn: 6197 init1: 3983 opt: 3983 Z-score: 2256.6 bits: 427.6 E(85289): 5.9e-119
Smith-Waterman score: 3983; 99.5% identity (99.6% similar) in 569 aa overlap (1-569:1-569)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IQHQRIHTGEKPYQCDECGKAFRQRKKTSYKEILLKNHSEPQAGVNLLLSSLIPEWQSCF
:::::::::::::::::::::::::. :
XP_011 IQHQRIHTGEKPYQCDECGKAFRQRSDLSKHQRIHNRRGTYVCKECGKSFRQNSALTQHQ
550 560 570 580 590 600
>>NP_001156863 (OMIM: 603978) zinc finger and SCAN domai (611 aa)
initn: 6197 init1: 3983 opt: 3983 Z-score: 2256.6 bits: 427.6 E(85289): 5.9e-119
Smith-Waterman score: 3983; 99.5% identity (99.6% similar) in 569 aa overlap (1-569:1-569)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IQHQRIHTGEKPYQCDECGKAFRQRKKTSYKEILLKNHSEPQAGVNLLLSSLIPEWQSCF
:::::::::::::::::::::::::. :
NP_001 IQHQRIHTGEKPYQCDECGKAFRQRSDLSKHQRIHNRRGTYVCKECGKSFRQNSALTQHQ
550 560 570 580 590 600
>>XP_011513319 (OMIM: 603978) PREDICTED: zinc finger and (565 aa)
initn: 3980 init1: 3980 opt: 3980 Z-score: 2255.2 bits: 427.3 E(85289): 7e-119
Smith-Waterman score: 3980; 100.0% identity (100.0% similar) in 565 aa overlap (1-565:1-565)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LEDLERELDEPGEQVSVHTGEQEMFLQETVRLRKEGEPSMSLQSMKAQPKYESPELESQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EQVLDVETGNEYGNLKQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEPSACS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 REDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIHTGDR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEKHYHC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYECNECG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEKAFIQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTSLTEHQRIHTGERPYKCDKCGKAFTQRSVLTEHQRIHTGERPYKCDECGNAFRGITSL
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IQHQRIHTGEKPYQCDECGKAFRQRKKTSYKEILLKNHSEPQAGVNLLLSSLIPEWQSCF
:::::::::::::::::::::::::
XP_011 IQHQRIHTGEKPYQCDECGKAFRQR
550 560
>>NP_001128688 (OMIM: 610794) zinc finger and SCAN domai (406 aa)
initn: 1783 init1: 1356 opt: 1461 Z-score: 846.1 bits: 166.0 E(85289): 2.2e-40
Smith-Waterman score: 1461; 56.4% identity (78.4% similar) in 399 aa overlap (19-413:13-406)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::.::. :. :: :: ..:. :: ::::::::: ::
NP_001 MASTEEQYDLKIVKVEEDPIWD-QETHLRGNNFSGQEASRQLFRQFCYQETPGP
10 20 30 40 50
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
:::::::::::::::::: :::::::::::::::::::::::::::.:.:::::::.:.:
NP_001 REALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAV
60 70 80 90 100 110
130 140 150 160 170
pF1KSD LEDLERELDEPGEQVSVHT-GEQEMFLQETVRLRKEGEPS-MSLQSMKAQPKYESPELES
.::::.::.:::.:. : :..:..:... .:. . ::. ..:: : .: .::: :..
NP_001 VEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESFCLHQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD QQEQVLDVETGNEYGNL--KQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEP
::: : :. : .: :::. .::: : .::.. :.: ... :: . . .:.
NP_001 FQEQ--DGESIPENQELASKQEILKEMEHLG--DSKLQRDVSLDSKYRETCKRDSKAEKQ
180 190 200 210 220
240 250 260 270 280 290
pF1KSD SACSREDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIH
.: : ... :.: : :.:..: ::::: ::. : :..::::::..: : ::.: :
NP_001 QAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRSH
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD TGDRPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEK
::..::.:.:::::: . . : ::. ::::::::.:. ::::: : : ::::.:::::
NP_001 TGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQRIHTGEK
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD HYHCNDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYEC
.:.: .::::: :.::::.:...:: .:::::.::.: ::.:..: .:: .::: .:
NP_001 RYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKIHTGERP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD NECGKAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEK
>>XP_011513114 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 1783 init1: 1356 opt: 1461 Z-score: 846.1 bits: 166.0 E(85289): 2.2e-40
Smith-Waterman score: 1461; 56.4% identity (78.4% similar) in 399 aa overlap (19-413:13-406)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::.::. :. :: :: ..:. :: ::::::::: ::
XP_011 MASTEEQYDLKIVKVEEDPIWD-QETHLRGNNFSGQEASRQLFRQFCYQETPGP
10 20 30 40 50
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
:::::::::::::::::: :::::::::::::::::::::::::::.:.:::::::.:.:
XP_011 REALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAV
60 70 80 90 100 110
130 140 150 160 170
pF1KSD LEDLERELDEPGEQVSVHT-GEQEMFLQETVRLRKEGEPS-MSLQSMKAQPKYESPELES
.::::.::.:::.:. : :..:..:... .:. . ::. ..:: : .: .::: :..
XP_011 VEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESFCLHQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD QQEQVLDVETGNEYGNL--KQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEP
::: : :. : .: :::. .::: : .::.. :.: ... :: . . .:.
XP_011 FQEQ--DGESIPENQELASKQEILKEMEHLG--DSKLQRDVSLDSKYRETCKRDSKAEKQ
180 190 200 210 220
240 250 260 270 280 290
pF1KSD SACSREDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIH
.: : ... :.: : :.:..: ::::: ::. : :..::::::..: : ::.: :
XP_011 QAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRSH
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD TGDRPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEK
::..::.:.:::::: . . : ::. ::::::::.:. ::::: : : ::::.:::::
XP_011 TGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQRIHTGEK
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD HYHCNDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYEC
.:.: .::::: :.::::.:...:: .:::::.::.: ::.:..: .:: .::: .:
XP_011 RYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKIHTGERP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD NECGKAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEK
>>XP_011513110 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 1783 init1: 1356 opt: 1461 Z-score: 846.1 bits: 166.0 E(85289): 2.2e-40
Smith-Waterman score: 1461; 56.4% identity (78.4% similar) in 399 aa overlap (19-413:13-406)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::.::. :. :: :: ..:. :: ::::::::: ::
XP_011 MASTEEQYDLKIVKVEEDPIWD-QETHLRGNNFSGQEASRQLFRQFCYQETPGP
10 20 30 40 50
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
:::::::::::::::::: :::::::::::::::::::::::::::.:.:::::::.:.:
XP_011 REALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAV
60 70 80 90 100 110
130 140 150 160 170
pF1KSD LEDLERELDEPGEQVSVHT-GEQEMFLQETVRLRKEGEPS-MSLQSMKAQPKYESPELES
.::::.::.:::.:. : :..:..:... .:. . ::. ..:: : .: .::: :..
XP_011 VEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESFCLHQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD QQEQVLDVETGNEYGNL--KQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEP
::: : :. : .: :::. .::: : .::.. :.: ... :: . . .:.
XP_011 FQEQ--DGESIPENQELASKQEILKEMEHLG--DSKLQRDVSLDSKYRETCKRDSKAEKQ
180 190 200 210 220
240 250 260 270 280 290
pF1KSD SACSREDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIH
.: : ... :.: : :.:..: ::::: ::. : :..::::::..: : ::.: :
XP_011 QAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRSH
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD TGDRPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEK
::..::.:.:::::: . . : ::. ::::::::.:. ::::: : : ::::.:::::
XP_011 TGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQRIHTGEK
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD HYHCNDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYEC
.:.: .::::: :.::::.:...:: .:::::.::.: ::.:..: .:: .::: .:
XP_011 RYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKIHTGERP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD NECGKAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEK
>>NP_001128687 (OMIM: 610794) zinc finger and SCAN domai (406 aa)
initn: 1783 init1: 1356 opt: 1461 Z-score: 846.1 bits: 166.0 E(85289): 2.2e-40
Smith-Waterman score: 1461; 56.4% identity (78.4% similar) in 399 aa overlap (19-413:13-406)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::.::. :. :: :: ..:. :: ::::::::: ::
NP_001 MASTEEQYDLKIVKVEEDPIWD-QETHLRGNNFSGQEASRQLFRQFCYQETPGP
10 20 30 40 50
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
:::::::::::::::::: :::::::::::::::::::::::::::.:.:::::::.:.:
NP_001 REALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAV
60 70 80 90 100 110
130 140 150 160 170
pF1KSD LEDLERELDEPGEQVSVHT-GEQEMFLQETVRLRKEGEPS-MSLQSMKAQPKYESPELES
.::::.::.:::.:. : :..:..:... .:. . ::. ..:: : .: .::: :..
NP_001 VEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESFCLHQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD QQEQVLDVETGNEYGNL--KQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEP
::: : :. : .: :::. .::: : .::.. :.: ... :: . . .:.
NP_001 FQEQ--DGESIPENQELASKQEILKEMEHLG--DSKLQRDVSLDSKYRETCKRDSKAEKQ
180 190 200 210 220
240 250 260 270 280 290
pF1KSD SACSREDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIH
.: : ... :.: : :.:..: ::::: ::. : :..::::::..: : ::.: :
NP_001 QAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRSH
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD TGDRPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEK
::..::.:.:::::: . . : ::. ::::::::.:. ::::: : : ::::.:::::
NP_001 TGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQRIHTGEK
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD HYHCNDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYEC
.:.: .::::: :.::::.:...:: .:::::.::.: ::.:..: .:: .::: .:
NP_001 RYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKIHTGERP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD NECGKAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEK
>>XP_011513111 (OMIM: 610794) PREDICTED: zinc finger and (406 aa)
initn: 1783 init1: 1356 opt: 1461 Z-score: 846.1 bits: 166.0 E(85289): 2.2e-40
Smith-Waterman score: 1461; 56.4% identity (78.4% similar) in 399 aa overlap (19-413:13-406)
10 20 30 40 50 60
pF1KSD MASTWAIQAHMDQDEPLEVKIEEEKYTTRQDWDLRKNNTHSREVFRQYFRQFCYQETSGP
::.::. :. :: :: ..:. :: ::::::::: ::
XP_011 MASTEEQYDLKIVKVEEDPIWD-QETHLRGNNFSGQEASRQLFRQFCYQETPGP
10 20 30 40 50
70 80 90 100 110 120
pF1KSD REALSRLRELCHQWLRPETHTKEQILELLVLEQFLTILPEELQAWVQEQHPESGEEVVTV
:::::::::::::::::: :::::::::::::::::::::::::::.:.:::::::.:.:
XP_011 REALSRLRELCHQWLRPEIHTKEQILELLVLEQFLTILPEELQAWVREHHPESGEEAVAV
60 70 80 90 100 110
130 140 150 160 170
pF1KSD LEDLERELDEPGEQVSVHT-GEQEMFLQETVRLRKEGEPS-MSLQSMKAQPKYESPELES
.::::.::.:::.:. : :..:..:... .:. . ::. ..:: : .: .::: :..
XP_011 VEDLEQELSEPGNQAPDHEHGHSEVLLEDVEHLKVKQEPTDIQLQPMVTQLRYESFCLHQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD QQEQVLDVETGNEYGNL--KQEVSEEMEPHGKTSSKFENDMSKSARCGETREPEEITEEP
::: : :. : .: :::. .::: : .::.. :.: ... :: . . .:.
XP_011 FQEQ--DGESIPENQELASKQEILKEMEHLG--DSKLQRDVSLDSKYRETCKRDSKAEKQ
180 190 200 210 220
240 250 260 270 280 290
pF1KSD SACSREDKQPTCDENGVSLTENSDHTEHQRICPGEESYGCDDCGKAFSQHSHLIEHQRIH
.: : ... :.: : :.:..: ::::: ::. : :..::::::..: : ::.: :
XP_011 QAHSTGERRHRCNECGKSFTKSSVLIEHQRIHTGEKPYECEECGKAFSRRSSLNEHRRSH
230 240 250 260 270 280
300 310 320 330 340 350
pF1KSD TGDRPYKCEECGKAFRGRTVLIRHKIIHTGEKPYKCNECGKAFGRWSALNQHQRLHTGEK
::..::.:.:::::: . . : ::. ::::::::.:. ::::: : : ::::.:::::
XP_011 TGEKPYQCKECGKAFSASNGLTRHRRIHTGEKPYECKVCGKAFLLSSCLVQHQRIHTGEK
290 300 310 320 330 340
360 370 380 390 400 410
pF1KSD HYHCNDCGKAFSQKAGLFHHIKIHTRDKPYQCTQCNKSFSRRSILTQHQGVHTGAKPYEC
.:.: .::::: :.::::.:...:: .:::::.::.: ::.:..: .:: .::: .:
XP_011 RYQCRECGKAFIQNAGLFQHLRVHTGEKPYQCSQCSKLFSKRTLLKKHQKIHTGERP
350 360 370 380 390 400
420 430 440 450 460 470
pF1KSD NECGKAFVYNSSLVSHQEIHHKEKCYQCKECGKSFSQSGLIQHQRIHTGEKPYKCDVCEK
604 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 01:41:59 2016 done: Thu Nov 3 01:42:01 2016
Total Scan time: 10.090 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]