Result of FASTA (ccds) for
pF1KE6728
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE6728, 975 aa
1>>>pF1KE6728 975 - 975 aa - 975 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3338+/-0.00111; mu= 20.8713+/- 0.066
mean_var=64.0348+/-12.864, 0's: 0 Z-trim(100.6): 42 B-trim: 4 in 1/50
Lambda= 0.160275
statistics sampled from 6166 (6183) to 6166 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.524), E-opt: 0.2 (0.19), width: 16
Scan time: 4.020
The best scores are: opt bits E(32554)
CCDS34167.1 IPO11 gene_id:51194|Hs108|chr5 ( 975) 6418 1493.8 0
CCDS47217.1 IPO11 gene_id:51194|Hs108|chr5 (1015) 6418 1493.8 0
>>CCDS34167.1 IPO11 gene_id:51194|Hs108|chr5 (975 aa)
initn: 6418 init1: 6418 opt: 6418 Z-score: 8011.3 bits: 1493.8 E(32554): 0
Smith-Waterman score: 6418; 100.0% identity (100.0% similar) in 975 aa overlap (1-975:1-975)
10 20 30 40 50 60
pF1KE6 MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRW
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE6 LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE6 CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 CPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE6 ACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE6 GIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE6 SYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE6 TLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 TLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEY
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE6 NQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 NQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE6 ELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE6 LTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE6 CLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 CLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPH
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE6 VYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE6 FLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 FLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE6 GERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNIT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE6 QPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE6 EEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETV
910 920 930 940 950 960
970
pF1KE6 DTEIVTQLQEFLQGF
:::::::::::::::
CCDS34 DTEIVTQLQEFLQGF
970
>>CCDS47217.1 IPO11 gene_id:51194|Hs108|chr5 (1015 aa)
initn: 6418 init1: 6418 opt: 6418 Z-score: 8011.0 bits: 1493.8 E(32554): 0
Smith-Waterman score: 6418; 100.0% identity (100.0% similar) in 975 aa overlap (1-975:41-1015)
10 20 30
pF1KE6 MDLNSASTVVLQVLTQATSQDTAVLKPAEE
::::::::::::::::::::::::::::::
CCDS47 VVYSLLYLGYKPVQHVTALNTVSSCHKMVSMDLNSASTVVLQVLTQATSQDTAVLKPAEE
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE6 QLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYWRRVAPHALSEEEKTTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYWRRVAPHALSEEEKTTL
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE6 RAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIESVKVQDDLRQHRALLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIESVKVQDDLRQHRALLT
140 150 160 170 180 190
160 170 180 190 200 210
pF1KE6 FYHVTKTLASKRLAADRKLFYDLASGIYNFACSLWNHHTDTFLQEVSSGNEAAILSSLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FYHVTKTLASKRLAADRKLFYDLASGIYNFACSLWNHHTDTFLQEVSSGNEAAILSSLER
200 210 220 230 240 250
220 230 240 250 260 270
pF1KE6 TLLSLKVLRKLTVNGFVEPHKNMEVMGFLHGIFERLKQFLECSRSIGTDNVCRDRLEKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TLLSLKVLRKLTVNGFVEPHKNMEVMGFLHGIFERLKQFLECSRSIGTDNVCRDRLEKTI
260 270 280 290 300 310
280 290 300 310 320 330
pF1KE6 ILFTKVLLDFLDQHPFSFTPLIQRSLEFSVSYVFTEVGEGVTFERFIVQCMNLIKMIVKN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ILFTKVLLDFLDQHPFSFTPLIQRSLEFSVSYVFTEVGEGVTFERFIVQCMNLIKMIVKN
320 330 340 350 360 370
340 350 360 370 380 390
pF1KE6 YAYKPSKNFEDSSPETLEAHKIKMAFFTYPTLTEICRRLVSHYFLLTEEELTMWEEDPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YAYKPSKNFEDSSPETLEAHKIKMAFFTYPTLTEICRRLVSHYFLLTEEELTMWEEDPEG
380 390 400 410 420 430
400 410 420 430 440 450
pF1KE6 FTVEETGGDSWKYSLRPCTEVLFIDIFHEYNQTLTPVLLEMMQTLQGPTNVEDMNALLIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FTVEETGGDSWKYSLRPCTEVLFIDIFHEYNQTLTPVLLEMMQTLQGPTNVEDMNALLIK
440 450 460 470 480 490
460 470 480 490 500 510
pF1KE6 DAVYNAVGLAAYELFDSVDFDQWFKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DAVYNAVGLAAYELFDSVDFDQWFKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKS
500 510 520 530 540 550
520 530 540 550 560 570
pF1KE6 DLRPMLYEAICNLLQDQDLVVRIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DLRPMLYEAICNLLQDQDLVVRIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQ
560 570 580 590 600 610
580 590 600 610 620 630
pF1KE6 VTECDTKMHVLHVLSCVIERVNMQIRPYVGCLVQYLPLLWKQSEEHNMLRCAILTTLIHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VTECDTKMHVLHVLSCVIERVNMQIRPYVGCLVQYLPLLWKQSEEHNMLRCAILTTLIHL
620 630 640 650 660 670
640 650 660 670 680 690
pF1KE6 VQGLGADSKNLYPFLLPVIQLSTDVSQPPHVYLLEDGLELWLVTLENSPCITPELLRIFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VQGLGADSKNLYPFLLPVIQLSTDVSQPPHVYLLEDGLELWLVTLENSPCITPELLRIFQ
680 690 700 710 720 730
700 710 720 730 740 750
pF1KE6 NMSPLLELSSENLRTCFKIINGYIFLSSTEFLQTYAVGLCQSFCELLKEITTEGQVQVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NMSPLLELSSENLRTCFKIINGYIFLSSTEFLQTYAVGLCQSFCELLKEITTEGQVQVLK
740 750 760 770 780 790
760 770 780 790 800 810
pF1KE6 VVENALKVNPILGPQMFQPILPYVFKGIIEGERYPVVMSTYLGVMGRVLLQNTSFFSSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VVENALKVNPILGPQMFQPILPYVFKGIIEGERYPVVMSTYLGVMGRVLLQNTSFFSSLL
800 810 820 830 840 850
820 830 840 850 860 870
pF1KE6 NEMAHKFNQEMDQLLGNMIEMWVDRMDNITQPERRKLSALALLSLLPSDNSVIQDKFCGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NEMAHKFNQEMDQLLGNMIEMWVDRMDNITQPERRKLSALALLSLLPSDNSVIQDKFCGI
860 870 880 890 900 910
880 890 900 910 920 930
pF1KE6 INISVEGLHDVMTEDPETGTYKDCMLMSHLEEPKVTEDEEPPTEQDKRKKMLALKDPVHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 INISVEGLHDVMTEDPETGTYKDCMLMSHLEEPKVTEDEEPPTEQDKRKKMLALKDPVHT
920 930 940 950 960 970
940 950 960 970
pF1KE6 VSLQQFIYEKLKAQQEMLGEQGFQSLMETVDTEIVTQLQEFLQGF
:::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VSLQQFIYEKLKAQQEMLGEQGFQSLMETVDTEIVTQLQEFLQGF
980 990 1000 1010
975 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Oct 20 17:10:09 2017 done: Fri Oct 20 17:10:10 2017
Total Scan time: 4.020 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]