Result of FASTA (ccds) for
pF1KE5136
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5136, 136 aa
1>>>pF1KE5136 136 - 136 aa - 136 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7304+/-0.00073; mu= 15.3278+/- 0.044
mean_var=67.0986+/-13.330, 0's: 0 Z-trim(109.3): 24 B-trim: 291 in 2/47
Lambda= 0.156573
statistics sampled from 10948 (10970) to 10948 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.328), width: 16
Scan time: 0.900
The best scores are: opt bits E(33420)
CCDS4638.1 H3C12 gene_id:8356|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4602.1 H3C8 gene_id:8355|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4596.1 H3C6 gene_id:8353|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4576.1 H3C3 gene_id:8352|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4636.1 H3C11 gene_id:8354|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4627.1 H3C10 gene_id:8357|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4600.1 H3C7 gene_id:8968|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4590.1 H3C4 gene_id:8351|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4570.1 H3C1 gene_id:8350|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS4573.1 H3C2 gene_id:8358|Hs109|chr6 ( 136) 870 204.4 1.8e-53
CCDS30850.1 H3C15 gene_id:333932|Hs109|chr1 ( 136) 856 201.3 1.6e-52
CCDS41388.1 H3C13 gene_id:653604|Hs109|chr1 ( 136) 856 201.3 1.6e-52
CCDS30848.1 H3C14 gene_id:126961|Hs109|chr1 ( 136) 856 201.3 1.6e-52
CCDS1572.1 4 gene_id:8290|Hs109|chr1 ( 136) 852 200.4 3e-52
CCDS1550.1 3A gene_id:3020|Hs109|chr1 ( 136) 837 197.0 3.1e-51
CCDS11729.1 3B gene_id:3021|Hs109|chr17 ( 136) 837 197.0 3.1e-51
CCDS31769.1 5 gene_id:440093|Hs109|chr12 ( 135) 791 186.6 4.2e-48
CCDS87290.1 H3Y1 gene_id:391769|Hs109|chr5 ( 136) 689 163.5 3.6e-41
CCDS1729.1 CENPA gene_id:1058|Hs109|chr2 ( 140) 374 92.4 9.8e-20
>>CCDS4638.1 H3C12 gene_id:8356|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
130
>>CCDS4602.1 H3C8 gene_id:8355|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
130
>>CCDS4596.1 H3C6 gene_id:8353|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
130
>>CCDS4576.1 H3C3 gene_id:8352|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
130
>>CCDS4636.1 H3C11 gene_id:8354|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
130
>>CCDS4627.1 H3C10 gene_id:8357|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
130
>>CCDS4600.1 H3C7 gene_id:8968|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
130
>>CCDS4590.1 H3C4 gene_id:8351|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
130
>>CCDS4570.1 H3C1 gene_id:8350|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
130
>>CCDS4573.1 H3C2 gene_id:8358|Hs109|chr6 (136 aa)
initn: 870 init1: 870 opt: 870 Z-score: 1073.7 bits: 204.4 E(33420): 1.8e-53
Smith-Waterman score: 870; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)
10 20 30 40 50 60
pF1KE5 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
70 80 90 100 110 120
130
pF1KE5 MPKDIQLARRIRGERA
::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
130
136 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Oct 24 21:35:45 2019 done: Thu Oct 24 21:35:46 2019
Total Scan time: 0.900 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]