FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2788, 301 aa
  1>>>pF1KE2788     301 - 301 aa - 301 aa
Library: human.CCDS.faa
  18921897 residues in 33420 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.4151+/-0.000981; mu= 10.2598+/- 0.059
 mean_var=76.5053+/-15.140, 0's: 0 Z-trim(104.5): 17  B-trim: 5 in 2/49
 Lambda= 0.146632
 statistics sampled from 8058 (8063) to 8058 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.241), width:  16
 Scan time:  1.150

The best scores are:                                      opt bits E(33420)
CCDS14224.1 TASL gene_id:80231|Hs109|chrX          ( 301) 1934 418.6  3e-117


>>CCDS14224.1 TASL gene_id:80231|Hs109|chrX               (301 aa)
 initn: 1934 init1: 1934 opt: 1934  Z-score: 2218.6  bits: 418.6 E(33420): 3e-117
Smith-Waterman score: 1934; 100.0% identity (100.0% similar) in 301 aa overlap (1-301:1-301)

               10        20        30        40        50        60
pF1KE2 MLSEGYLSGLEYWNDIHWSCASYNEQVAGEKEEETNSVATLSYSSVDETQVRSLYVSCKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MLSEGYLSGLEYWNDIHWSCASYNEQVAGEKEEETNSVATLSYSSVDETQVRSLYVSCKS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 SGKFISSVHSRESQHSRSQRVTVLQTNPNPVFESPNLAAVEICRDASRETYLVPSSCKSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 SGKFISSVHSRESQHSRSQRVTVLQTNPNPVFESPNLAAVEICRDASRETYLVPSSCKSI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 CKNYNDLQIAGGQVMAINSVTTDFPSESSFEYGPLLKSSEIPLPMEDSISTQPSDFPQKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 CKNYNDLQIAGGQVMAINSVTTDFPSESSFEYGPLLKSSEIPLPMEDSISTQPSDFPQKP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 IQRYSSYWRITSIKEKSSLQMQNPISNAVLNEYLEQKVVELYKQYIMDTVFHDSSPTQIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IQRYSSYWRITSIKEKSSLQMQNPISNAVLNEYLEQKVVELYKQYIMDTVFHDSSPTQIL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 ASELIMTSVDQISLQVSREKNLETSKARDIVFSRLLQLMSTEITEISTPSLHISQYSNVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ASELIMTSVDQISLQVSREKNLETSKARDIVFSRLLQLMSTEITEISTPSLHISQYSNVN
              250       260       270       280       290       300

        
pF1KE2 P
       :
CCDS14 P
        




301 residues in 1 query   sequences
18921897 residues in 33420 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Aug 16 14:33:06 2021 done: Mon Aug 16 14:33:06 2021
 Total Scan time:  1.150 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]