FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2755, 133 aa
  1>>>pF1KE2755     133 - 133 aa - 133 aa
Library: human.CCDS.faa
  18921897 residues in 33420 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2784+/-0.000761; mu= 10.7844+/- 0.046
 mean_var=55.9014+/-10.966, 0's: 0 Z-trim(106.9): 5  B-trim: 0 in 0/51
 Lambda= 0.171539
 statistics sampled from 9388 (9390) to 9388 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.281), width:  16
 Scan time:  0.790

The best scores are:                                      opt bits E(33420)
CCDS3299.1 OSTN gene_id:344901|Hs109|chr3          ( 133)  847 217.3 2.2e-57


>>CCDS3299.1 OSTN gene_id:344901|Hs109|chr3               (133 aa)
 initn: 847 init1: 847 opt: 847  Z-score: 1143.8  bits: 217.3 E(33420): 2.2e-57
Smith-Waterman score: 847; 100.0% identity (100.0% similar) in 133 aa overlap (1-133:1-133)

               10        20        30        40        50        60
pF1KE2 MLDWRLASAHFILAVTLTLWSSGKVLSVDVTTTEAFDSGVIDVQSTPTVREEKSATDLTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MLDWRLASAHFILAVTLTLWSSGKVLSVDVTTTEAFDSGVIDVQSTPTVREEKSATDLTA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 KLLLLDELVSLENDVIETKKKRSFSGFGSPLDRLSAGSVDHKGKQRKVVDHPKRRFGIPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KLLLLDELVSLENDVIETKKKRSFSGFGSPLDRLSAGSVDHKGKQRKVVDHPKRRFGIPM
               70        80        90       100       110       120

              130   
pF1KE2 DRIGRNRLSNSRG
       :::::::::::::
CCDS32 DRIGRNRLSNSRG
              130   




133 residues in 1 query   sequences
18921897 residues in 33420 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Jun 30 14:57:42 2019 done: Sun Jun 30 14:57:42 2019
 Total Scan time:  0.790 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]