Result of FASTA (ccds) for
pF1KE2516
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2516, 371 aa
1>>>pF1KE2516 371 - 371 aa - 371 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9172+/-0.000703; mu= 12.2468+/- 0.043
mean_var=158.9040+/-30.787, 0's: 0 Z-trim(116.0): 32 B-trim: 107 in 1/52
Lambda= 0.101744
statistics sampled from 16559 (16591) to 16559 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.813), E-opt: 0.2 (0.51), width: 16
Scan time: 3.230
The best scores are: opt bits E(32554)
CCDS34458.1 VEGFA gene_id:7422|Hs108|chr6 ( 371) 2636 398.0 7e-111
CCDS47432.1 VEGFA gene_id:7422|Hs108|chr6 ( 371) 2585 390.5 1.2e-108
CCDS47435.1 VEGFA gene_id:7422|Hs108|chr6 ( 354) 2505 378.7 4.1e-105
CCDS4907.2 VEGFA gene_id:7422|Hs108|chr6 ( 395) 2256 342.2 4.5e-94
CCDS47433.1 VEGFA gene_id:7422|Hs108|chr6 ( 389) 2249 341.2 9.1e-94
CCDS47434.1 VEGFA gene_id:7422|Hs108|chr6 ( 327) 2244 340.4 1.3e-93
CCDS34457.1 VEGFA gene_id:7422|Hs108|chr6 ( 412) 2241 340.1 2.1e-93
CCDS55007.1 VEGFA gene_id:7422|Hs108|chr6 ( 317) 2186 331.9 4.8e-91
CCDS55012.1 VEGFA gene_id:7422|Hs108|chr6 ( 191) 1417 218.8 3.2e-57
CCDS55013.1 VEGFA gene_id:7422|Hs108|chr6 ( 191) 1366 211.3 5.7e-55
CCDS55011.1 VEGFA gene_id:7422|Hs108|chr6 ( 174) 1286 199.5 1.8e-51
CCDS69125.1 VEGFA gene_id:7422|Hs108|chr6 ( 163) 1214 188.9 2.7e-48
CCDS55009.1 VEGFA gene_id:7422|Hs108|chr6 ( 215) 1037 163.1 2.1e-40
CCDS55008.1 VEGFA gene_id:7422|Hs108|chr6 ( 209) 1030 162.0 4.3e-40
CCDS55014.1 VEGFA gene_id:7422|Hs108|chr6 ( 147) 1025 161.1 5.6e-40
CCDS55010.1 VEGFA gene_id:7422|Hs108|chr6 ( 232) 1022 160.9 1e-39
CCDS55015.1 VEGFA gene_id:7422|Hs108|chr6 ( 137) 967 152.6 1.9e-37
CCDS58144.1 VEGFB gene_id:7423|Hs108|chr11 ( 188) 513 86.1 2.8e-17
CCDS9835.1 PGF gene_id:5228|Hs108|chr14 ( 170) 452 77.1 1.3e-14
CCDS73664.1 PGF gene_id:5228|Hs108|chr14 ( 169) 451 76.9 1.4e-14
CCDS55932.1 PGF gene_id:5228|Hs108|chr14 ( 149) 449 76.6 1.6e-14
>>CCDS34458.1 VEGFA gene_id:7422|Hs108|chr6 (371 aa)
initn: 2636 init1: 2636 opt: 2636 Z-score: 2104.2 bits: 398.0 E(32554): 7e-111
Smith-Waterman score: 2636; 100.0% identity (100.0% similar) in 371 aa overlap (1-371:1-371)
10 20 30 40 50 60
pF1KE2 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
310 320 330 340 350 360
370
pF1KE2 ERTCRCDKPRR
:::::::::::
CCDS34 ERTCRCDKPRR
370
>>CCDS47432.1 VEGFA gene_id:7422|Hs108|chr6 (371 aa)
initn: 2585 init1: 2585 opt: 2585 Z-score: 2063.7 bits: 390.5 E(32554): 1.2e-108
Smith-Waterman score: 2585; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365)
10 20 30 40 50 60
pF1KE2 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
310 320 330 340 350 360
370
pF1KE2 ERTCRCDKPRR
:::::
CCDS47 ERTCRSLTRKD
370
>>CCDS47435.1 VEGFA gene_id:7422|Hs108|chr6 (354 aa)
initn: 2505 init1: 2505 opt: 2505 Z-score: 2000.5 bits: 378.7 E(32554): 4.1e-105
Smith-Waterman score: 2505; 100.0% identity (100.0% similar) in 353 aa overlap (1-353:1-353)
10 20 30 40 50 60
pF1KE2 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKM
310 320 330 340 350
370
pF1KE2 ERTCRCDKPRR
>>CCDS4907.2 VEGFA gene_id:7422|Hs108|chr6 (395 aa)
initn: 2615 init1: 2241 opt: 2256 Z-score: 1802.4 bits: 342.2 E(32554): 4.5e-94
Smith-Waterman score: 2571; 93.7% identity (93.9% similar) in 395 aa overlap (1-371:1-395)
10 20 30 40 50 60
pF1KE2 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
250 260 270 280 290 300
310 320 330
pF1KE2 SFLQHNKCECRPKKDRARQEN------------------------PCGPCSERRKHLFVQ
::::::::::::::::::::. :::::::::::::::
CCDS49 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVPCGPCSERRKHLFVQ
310 320 330 340 350 360
340 350 360 370
pF1KE2 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
:::::::::::::::::::::::::::::::::::
CCDS49 DPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
370 380 390
>>CCDS47433.1 VEGFA gene_id:7422|Hs108|chr6 (389 aa)
initn: 2241 init1: 2241 opt: 2249 Z-score: 1796.9 bits: 341.2 E(32554): 9.1e-94
Smith-Waterman score: 2583; 95.1% identity (95.4% similar) in 389 aa overlap (1-371:1-389)
10 20 30 40 50 60
pF1KE2 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
250 260 270 280 290 300
310 320 330 340
pF1KE2 SFLQHNKCECRPKKDRARQEN------------------PCGPCSERRKHLFVQDPQTCK
::::::::::::::::::::. :::::::::::::::::::::
CCDS47 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRPCGPCSERRKHLFVQDPQTCK
310 320 330 340 350 360
350 360 370
pF1KE2 CSCKNTDSRCKARQLELNERTCRCDKPRR
:::::::::::::::::::::::::::::
CCDS47 CSCKNTDSRCKARQLELNERTCRCDKPRR
370 380
>>CCDS47434.1 VEGFA gene_id:7422|Hs108|chr6 (327 aa)
initn: 2241 init1: 2241 opt: 2244 Z-score: 1793.9 bits: 340.4 E(32554): 1.3e-93
Smith-Waterman score: 2244; 97.3% identity (98.5% similar) in 331 aa overlap (1-331:1-327)
10 20 30 40 50 60
pF1KE2 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
::::::::::::::::::::. :.. :.
CCDS47 SFLQHNKCECRPKKDRARQEK----CDKPRR
310 320
370
pF1KE2 ERTCRCDKPRR
>>CCDS34457.1 VEGFA gene_id:7422|Hs108|chr6 (412 aa)
initn: 2616 init1: 2241 opt: 2241 Z-score: 1790.3 bits: 340.1 E(32554): 2.1e-93
Smith-Waterman score: 2462; 89.6% identity (89.8% similar) in 403 aa overlap (1-362:1-403)
10 20 30 40 50 60
pF1KE2 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
250 260 270 280 290 300
310 320
pF1KE2 SFLQHNKCECRPKKDRARQE----------------------------------------
::::::::::::::::::::
CCDS34 SFLQHNKCECRPKKDRARQEKKSVRGKGKGQKRKRKKSRYKSWSVYVGARCCLMPWSLPG
310 320 330 340 350 360
330 340 350 360 370
pF1KE2 -NPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
.:::::::::::::::::::::::::::::::::::::::::
CCDS34 PHPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
370 380 390 400 410
>>CCDS55007.1 VEGFA gene_id:7422|Hs108|chr6 (317 aa)
initn: 2179 init1: 2179 opt: 2186 Z-score: 1748.1 bits: 331.9 E(32554): 4.8e-91
Smith-Waterman score: 2186; 99.1% identity (99.1% similar) in 316 aa overlap (1-316:1-316)
10 20 30 40 50 60
pF1KE2 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MTDRQTDTAPSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALKLFVQLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRLGARKPGSWT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSASRAGPGRASET
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MNFLLSWVHWSLALLLYLHHAKWSQAAPMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 IFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 SFLQHNKCECRPKKDRARQENPCGPCSERRKHLFVQDPQTCKCSCKNTDSRCKARQLELN
::::::::::: : :
CCDS55 SFLQHNKCECRCDKPRR
310
>>CCDS55012.1 VEGFA gene_id:7422|Hs108|chr6 (191 aa)
initn: 1417 init1: 1417 opt: 1417 Z-score: 1140.8 bits: 218.8 E(32554): 3.2e-57
Smith-Waterman score: 1417; 100.0% identity (100.0% similar) in 191 aa overlap (181-371:1-191)
160 170 180 190 200 210
pF1KE2 RRGAEESGPPHSPSRRGSASRAGPGRASETMNFLLSWVHWSLALLLYLHHAKWSQAAPMA
::::::::::::::::::::::::::::::
CCDS55 MNFLLSWVHWSLALLLYLHHAKWSQAAPMA
10 20 30
220 230 240 250 260 270
pF1KE2 EGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDE
40 50 60 70 80 90
280 290 300 310 320 330
pF1KE2 GLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQENPCGPCSERR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQENPCGPCSERR
100 110 120 130 140 150
340 350 360 370
pF1KE2 KHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
:::::::::::::::::::::::::::::::::::::::::
CCDS55 KHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
160 170 180 190
>>CCDS55013.1 VEGFA gene_id:7422|Hs108|chr6 (191 aa)
initn: 1366 init1: 1366 opt: 1366 Z-score: 1100.4 bits: 211.3 E(32554): 5.7e-55
Smith-Waterman score: 1366; 100.0% identity (100.0% similar) in 185 aa overlap (181-365:1-185)
160 170 180 190 200 210
pF1KE2 RRGAEESGPPHSPSRRGSASRAGPGRASETMNFLLSWVHWSLALLLYLHHAKWSQAAPMA
::::::::::::::::::::::::::::::
CCDS55 MNFLLSWVHWSLALLLYLHHAKWSQAAPMA
10 20 30
220 230 240 250 260 270
pF1KE2 EGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDE
40 50 60 70 80 90
280 290 300 310 320 330
pF1KE2 GLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQENPCGPCSERR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQENPCGPCSERR
100 110 120 130 140 150
340 350 360 370
pF1KE2 KHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRCDKPRR
:::::::::::::::::::::::::::::::::::
CCDS55 KHLFVQDPQTCKCSCKNTDSRCKARQLELNERTCRSLTRKD
160 170 180 190
371 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 03:06:01 2016 done: Tue Nov 8 03:06:01 2016
Total Scan time: 3.230 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]