Result of FASTA (ccds) for
pF1KE2455
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2455, 479 aa
1>>>pF1KE2455 479 - 479 aa - 479 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.9067+/-0.000916; mu= 3.6698+/- 0.056
mean_var=266.2867+/-54.581, 0's: 0 Z-trim(114.0): 177 B-trim: 8 in 1/52
Lambda= 0.078596
statistics sampled from 14401 (14593) to 14401 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.448), width: 16
Scan time: 3.730
The best scores are: opt bits E(32554)
CCDS42826.1 PAX3 gene_id:5077|Hs108|chr2 ( 479) 3268 383.7 2.3e-106
CCDS42825.1 PAX3 gene_id:5077|Hs108|chr2 ( 484) 3224 378.7 7.4e-105
CCDS2448.1 PAX3 gene_id:5077|Hs108|chr2 ( 505) 3224 378.7 7.7e-105
CCDS46522.1 PAX3 gene_id:5077|Hs108|chr2 ( 483) 3205 376.6 3.3e-104
CCDS2450.1 PAX3 gene_id:5077|Hs108|chr2 ( 403) 2658 314.5 1.4e-85
CCDS2449.1 PAX3 gene_id:5077|Hs108|chr2 ( 407) 2658 314.5 1.4e-85
CCDS44075.1 PAX7 gene_id:5081|Hs108|chr1 ( 518) 2521 299.0 7.7e-81
CCDS186.1 PAX7 gene_id:5081|Hs108|chr1 ( 520) 2507 297.5 2.3e-80
CCDS44074.1 PAX7 gene_id:5081|Hs108|chr1 ( 505) 2494 296.0 6.3e-80
CCDS2451.1 PAX3 gene_id:5077|Hs108|chr2 ( 206) 1321 162.6 3.7e-40
CCDS46523.1 PAX3 gene_id:5077|Hs108|chr2 ( 215) 1316 162.0 5.6e-40
CCDS74709.1 PAX1 gene_id:5075|Hs108|chr20 ( 457) 684 90.7 3.6e-18
CCDS6607.1 PAX5 gene_id:5079|Hs108|chr9 ( 391) 682 90.4 3.8e-18
CCDS13146.2 PAX1 gene_id:5075|Hs108|chr20 ( 534) 684 90.8 4e-18
CCDS65048.1 PAX5 gene_id:5079|Hs108|chr9 ( 362) 669 88.9 9.9e-18
CCDS65042.1 PAX5 gene_id:5079|Hs108|chr9 ( 319) 666 88.5 1.1e-17
CCDS65044.1 PAX5 gene_id:5079|Hs108|chr9 ( 295) 665 88.3 1.2e-17
CCDS65043.1 PAX5 gene_id:5079|Hs108|chr9 ( 348) 666 88.5 1.2e-17
CCDS46398.1 PAX8 gene_id:7849|Hs108|chr2 ( 450) 668 88.9 1.2e-17
CCDS65045.1 PAX5 gene_id:5079|Hs108|chr9 ( 324) 660 87.8 1.9e-17
CCDS65046.1 PAX5 gene_id:5079|Hs108|chr9 ( 328) 660 87.8 1.9e-17
CCDS65047.1 PAX5 gene_id:5079|Hs108|chr9 ( 357) 660 87.9 2e-17
CCDS41561.1 PAX2 gene_id:5076|Hs108|chr10 ( 394) 655 87.3 3.1e-17
CCDS7499.1 PAX2 gene_id:5076|Hs108|chr10 ( 396) 655 87.3 3.2e-17
CCDS9662.1 PAX9 gene_id:5083|Hs108|chr14 ( 341) 648 86.5 4.9e-17
CCDS42735.1 PAX8 gene_id:7849|Hs108|chr2 ( 287) 636 85.0 1.1e-16
CCDS46399.1 PAX8 gene_id:7849|Hs108|chr2 ( 398) 638 85.4 1.2e-16
CCDS42736.1 PAX8 gene_id:7849|Hs108|chr2 ( 321) 636 85.1 1.2e-16
CCDS31451.1 PAX6 gene_id:5080|Hs108|chr11 ( 422) 607 81.9 1.4e-15
>>CCDS42826.1 PAX3 gene_id:5077|Hs108|chr2 (479 aa)
initn: 3268 init1: 3268 opt: 3268 Z-score: 2023.0 bits: 383.7 E(32554): 2.3e-106
Smith-Waterman score: 3268; 100.0% identity (100.0% similar) in 479 aa overlap (1-479:1-479)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470
pF1KE2 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
430 440 450 460 470
>>CCDS42825.1 PAX3 gene_id:5077|Hs108|chr2 (484 aa)
initn: 3224 init1: 3224 opt: 3224 Z-score: 1996.0 bits: 378.7 E(32554): 7.4e-105
Smith-Waterman score: 3224; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470
pF1KE2 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
430 440 450 460 470 480
CCDS42 PDIA
>>CCDS2448.1 PAX3 gene_id:5077|Hs108|chr2 (505 aa)
initn: 3224 init1: 3224 opt: 3224 Z-score: 1995.7 bits: 378.7 E(32554): 7.7e-105
Smith-Waterman score: 3224; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
370 380 390 400 410 420
430 440 450 460 470
pF1KE2 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
430 440 450 460 470 480
CCDS24 PDIAWFQILLNTFDKSSGEEEDLEQ
490 500
>>CCDS46522.1 PAX3 gene_id:5077|Hs108|chr2 (483 aa)
initn: 2474 init1: 2474 opt: 3205 Z-score: 1984.3 bits: 376.6 E(32554): 3.3e-104
Smith-Waterman score: 3205; 99.8% identity (99.8% similar) in 474 aa overlap (1-474:1-473)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
CCDS46 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPK-VTTPDVEKKIEE
70 80 90 100 110
130 140 150 160 170 180
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE2 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE2 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE2 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
360 370 380 390 400 410
430 440 450 460 470
pF1KE2 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK
420 430 440 450 460 470
CCDS46 PDIA
480
>>CCDS2450.1 PAX3 gene_id:5077|Hs108|chr2 (403 aa)
initn: 2657 init1: 2657 opt: 2658 Z-score: 1650.1 bits: 314.5 E(32554): 1.4e-85
Smith-Waterman score: 2658; 98.2% identity (99.5% similar) in 399 aa overlap (1-399:1-399)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
:::::::::::::::::::::::::::::::: .....
CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVPFIISSQISRK
370 380 390 400
430 440 450 460 470
pF1KE2 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
>>CCDS2449.1 PAX3 gene_id:5077|Hs108|chr2 (407 aa)
initn: 2657 init1: 2657 opt: 2658 Z-score: 1650.1 bits: 314.5 E(32554): 1.4e-85
Smith-Waterman score: 2658; 98.2% identity (99.5% similar) in 399 aa overlap (1-399:1-399)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE
:::::::::::::::::::::::::::::::: .....
CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVPFIISSQISLGFKSF
370 380 390 400
430 440 450 460 470
pF1KE2 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF
>>CCDS44075.1 PAX7 gene_id:5081|Hs108|chr1 (518 aa)
initn: 2362 init1: 1079 opt: 2521 Z-score: 1564.8 bits: 299.0 E(32554): 7.7e-81
Smith-Waterman score: 2521; 77.3% identity (90.3% similar) in 484 aa overlap (1-477:1-472)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
CCDS44 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
CCDS44 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE-EADLERKEAEE
:::::::::::::::.::::. :::.::::::::::.:: :::: ::: ::: :. ..
CCDS44 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEEEDEAD---KKEDD
130 140 150 160 170
180 190 200 210 220 230
pF1KE2 SEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFE
.::::::::::::..... . :::::..:::::::::::::::::::::::::::.:::
CCDS44 GEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAM
::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::.:
CCDS44 RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE2 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAYCL
:::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
CCDS44 PTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY--
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE2 PSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLT
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...:::
CCDS44 -GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISPLH
360 370 380 390 400
420 430 440 450 460 470
pF1KE2 GGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSK-
:::. .:..::::::: : .: :::::::.::::::::::::.:::.::::::::::.
CCDS44 GGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQSEC
410 420 430 440 450 460
pF1KE2 --PWTF
::
CCDS44 LVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT
470 480 490 500 510
>>CCDS186.1 PAX7 gene_id:5081|Hs108|chr1 (520 aa)
initn: 2327 init1: 1050 opt: 2507 Z-score: 1556.2 bits: 297.5 E(32554): 2.3e-80
Smith-Waterman score: 2507; 77.0% identity (89.9% similar) in 486 aa overlap (1-477:1-474)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
CCDS18 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
CCDS18 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPS--VSSISRILRSKFGKGEEE-EADLERKEA
:::::::::::::::.::::. :::.:::: ::::::.:: :::: ::: ::: :.
CCDS18 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEAD---KKE
130 140 150 160 170
180 190 200 210 220 230
pF1KE2 EESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERA
...::::::::::::..... . :::::..:::::::::::::::::::::::::::.:
CCDS18 DDGEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT
::::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::
CCDS18 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE2 AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAY
.::::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
CCDS18 GMPTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE2 CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSP
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...::
CCDS18 ---GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISP
360 370 380 390 400
420 430 440 450 460 470
pF1KE2 LTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQS
: :::. .:..::::::: : .: :::::::.::::::::::::.:::.::::::::::
CCDS18 LHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQS
410 420 430 440 450 460
pF1KE2 K---PWTF
. ::
CCDS18 ECLVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT
470 480 490 500 510 520
>>CCDS44074.1 PAX7 gene_id:5081|Hs108|chr1 (505 aa)
initn: 2323 init1: 1050 opt: 2494 Z-score: 1548.4 bits: 296.0 E(32554): 6.3e-80
Smith-Waterman score: 2494; 77.3% identity (90.4% similar) in 480 aa overlap (1-474:1-468)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
:..: :.:::::::.:::::::.:::::::::::::::::::::::::::::::::::::
CCDS44 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::.::.::::::::::
CCDS44 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPS--VSSISRILRSKFGKGEEE-EADLERKEA
:::::::::::::::.::::. :::.:::: ::::::.:: :::: ::: ::: :.
CCDS44 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEAD---KKE
130 140 150 160 170
180 190 200 210 220 230
pF1KE2 EESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERA
...::::::::::::..... . :::::..:::::::::::::::::::::::::::.:
CCDS44 DDGEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE2 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT
::::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::
CCDS44 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE2 AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAY
.::::: ::: ...: :.: : : .:::::::::::::.::. . . :.::::
CCDS44 GMPTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY
300 310 320 330 340 350
360 370 380 390 400 410
pF1KE2 CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSP
..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...::
CCDS44 ---GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISP
360 370 380 390 400
420 430 440 450 460 470
pF1KE2 LTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQS
: :::. .:..::::::: : .: :::::::.::::::::::::.:::.:::::::::.
CCDS44 LHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQT
410 420 430 440 450 460
pF1KE2 KPWTF
CCDS44 AVDYLAKNVSLSTQRRMKLGEHSAVLGLLPVETGQAY
470 480 490 500
>>CCDS2451.1 PAX3 gene_id:5077|Hs108|chr2 (206 aa)
initn: 1321 init1: 1321 opt: 1321 Z-score: 834.4 bits: 162.6 E(32554): 3.7e-40
Smith-Waterman score: 1321; 99.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198)
10 20 30 40 50 60
pF1KE2 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER
:::::::::::::::..:
CCDS24 EKKAKHSIDGILSERGKALVSGVSSH
190 200
479 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 20:08:34 2016 done: Mon Nov 7 20:08:35 2016
Total Scan time: 3.730 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]