Result of FASTA (ccds) for
pF1KE2322
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2322, 1335 aa
1>>>pF1KE2322 1335 - 1335 aa - 1335 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.8145+/-0.00112; mu= 10.7180+/- 0.067
mean_var=125.4528+/-25.481, 0's: 0 Z-trim(106.3): 26 B-trim: 0 in 0/50
Lambda= 0.114508
statistics sampled from 9029 (9043) to 9029 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.271), width: 16
Scan time: 2.510
The best scores are: opt bits E(33420)
CCDS11773.1 RPTOR gene_id:57521|Hs109|chr17 (1335) 9008 1500.5 0
CCDS54175.1 RPTOR gene_id:57521|Hs109|chr17 (1177) 4501 756.0 1.4e-217
>>CCDS11773.1 RPTOR gene_id:57521|Hs109|chr17 (1335 aa)
initn: 9008 init1: 9008 opt: 9008 Z-score: 8042.9 bits: 1500.5 E(33420): 0
Smith-Waterman score: 9008; 100.0% identity (100.0% similar) in 1335 aa overlap (1-1335:1-1335)
10 20 30 40 50 60
pF1KE2 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE2 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE2 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE2 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE2 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE2 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE2 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE2 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE2 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE2 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE2 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE2 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE2 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE2 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
1270 1280 1290 1300 1310 1320
1330
pF1KE2 NDYYISVYSVEKRVR
:::::::::::::::
CCDS11 NDYYISVYSVEKRVR
1330
>>CCDS54175.1 RPTOR gene_id:57521|Hs109|chr17 (1177 aa)
initn: 4501 init1: 4501 opt: 4501 Z-score: 4019.8 bits: 756.0 E(33420): 1.4e-217
Smith-Waterman score: 7599; 88.2% identity (88.2% similar) in 1335 aa overlap (1-1335:1-1177)
10 20 30 40 50 60
pF1KE2 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MESEMLQSPLLGLGEEDEADLTDWNLPLAFMKKRHCEKIEGSKSLAQSWRMKDRMKTVSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGANLQKQYENWQPRARYK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEVWVFNKNYTQYIPLSIY
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMKNC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMRSY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE2 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQVWL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE2 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE2 QSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILA
:::::::::::::::::::::::
CCDS54 QSSARELRPLLVFIWAKILAVDS-------------------------------------
490 500
550 560 570 580 590 600
pF1KE2 VIVNSYHTGQEACLQGNLIAICLEQLNDPHPLLRQWVAICLGRIWQNFDSARWCGVRDSA
CCDS54 ------------------------------------------------------------
610 620 630 640 650 660
pF1KE2 HEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLVSDGSPMVR
CCDS54 ------------------------------------------------------------
670 680 690 700 710 720
pF1KE2 KELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 -ELVVALSHLVVQYESNFCTVALQFIEEEKNYALPSPATTEGGSLTPVRDSPCTPRLRSV
510 520 530 540 550 560
730 740 750 760 770 780
pF1KE2 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SSYGNIRAVATARSLNKSLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILS
570 580 590 600 610 620
790 800 810 820 830 840
pF1KE2 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FETIDKMRRASSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYK
630 640 650 660 670 680
850 860 870 880 890 900
pF1KE2 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ATVNARPQRVLDTSSLTQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRD
690 700 710 720 730 740
910 920 930 940 950 960
pF1KE2 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LPSGRPGTTGPAGAQYTPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATVQTGFC
750 760 770 780 790 800
970 980 990 1000 1010 1020
pF1KE2 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DWSARYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLN
810 820 830 840 850 860
1030 1040 1050 1060 1070 1080
pF1KE2 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RNPGVPSVVKFHPFTPCIAVADKDSICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQD
870 880 890 900 910 920
1090 1100 1110 1120 1130 1140
pF1KE2 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMS
930 940 950 960 970 980
1150 1160 1170 1180 1190 1200
pF1KE2 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SGDVRIVRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAGLGDGSIRVYDRRMALS
990 1000 1010 1020 1030 1040
1210 1220 1230 1240 1250 1260
pF1KE2 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ECRVMTYREHTAWVVKASLQKRPDGHIVSVSVNGDVRIFDPRMPESVNVLQIVKGLTALD
1050 1060 1070 1080 1090 1100
1270 1280 1290 1300 1310 1320
pF1KE2 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IHPQADLIACGSVNQFTAIYNSSGELINNIKYYDGFMGQRVGAISCLAFHPHWPHLAVGS
1110 1120 1130 1140 1150 1160
1330
pF1KE2 NDYYISVYSVEKRVR
:::::::::::::::
CCDS54 NDYYISVYSVEKRVR
1170
1335 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Jun 19 14:31:27 2019 done: Wed Jun 19 14:31:27 2019
Total Scan time: 2.510 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]