Result of FASTA (omim) for
pF1KE2155
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2155, 378 aa
1>>>pF1KE2155 378 - 378 aa - 378 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2372+/-0.000611; mu= 17.3039+/- 0.038
mean_var=128.9408+/-34.368, 0's: 0 Z-trim(106.6): 637 B-trim: 841 in 1/51
Lambda= 0.112948
statistics sampled from 13865 (14654) to 13865 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.486), E-opt: 0.2 (0.172), width: 16
Scan time: 6.980
The best scores are: opt bits E(85289)
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 2460 413.5 4.2e-115
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 2416 406.3 5.9e-113
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 2416 406.3 5.9e-113
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 2416 406.3 5.9e-113
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 2035 344.1 2.6e-94
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 1007 176.7 7.5e-44
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 1007 176.7 7.5e-44
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 1007 176.7 7.7e-44
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 1007 176.7 7.7e-44
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 955 168.2 2.8e-41
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 955 168.2 2.8e-41
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 841 149.6 1e-35
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 841 149.6 1e-35
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 836 148.8 1.9e-35
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 836 148.8 1.9e-35
NP_001707 (OMIM: 601613) C-X-C chemokine receptor ( 372) 788 141.0 4.3e-33
NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 786 140.7 5.3e-33
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 786 140.7 5.4e-33
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 786 140.7 5.7e-33
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 786 140.7 5.7e-33
NP_116743 (OMIM: 601613) C-X-C chemokine receptor ( 327) 780 139.6 9.8e-33
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 779 139.5 1.2e-32
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 772 138.4 2.6e-32
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 772 138.4 2.6e-32
NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 762 136.7 7.8e-32
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 762 136.7 7.8e-32
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 760 136.4 9.8e-32
NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 758 136.1 1.2e-31
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 758 136.1 1.2e-31
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 758 136.1 1.2e-31
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 758 136.1 1.2e-31
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 758 136.1 1.2e-31
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 758 136.1 1.2e-31
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 749 134.6 3.4e-31
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 745 134.0 5.3e-31
NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362) 734 132.2 1.9e-30
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 715 129.1 1.6e-29
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 711 128.4 2.5e-29
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 711 128.4 2.5e-29
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 711 128.4 2.5e-29
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 711 128.4 2.5e-29
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 711 128.5 2.6e-29
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 711 128.5 2.6e-29
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 711 128.5 2.7e-29
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 711 128.5 2.7e-29
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 689 124.8 3e-28
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 668 121.5 3.4e-27
NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 661 120.3 7.1e-27
NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 661 120.3 7.1e-27
NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 661 120.3 7.1e-27
>>NP_001829 (OMIM: 600242) C-C chemokine receptor type 7 (378 aa)
initn: 2460 init1: 2460 opt: 2460 Z-score: 2187.5 bits: 413.5 E(85289): 4.2e-115
Smith-Waterman score: 2460; 100.0% identity (100.0% similar) in 378 aa overlap (1-378:1-378)
10 20 30 40 50 60
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE2 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE2 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
310 320 330 340 350 360
370
pF1KE2 IRRSSMSVEAETTTTFSP
::::::::::::::::::
NP_001 IRRSSMSVEAETTTTFSP
370
>>NP_001288646 (OMIM: 600242) C-C chemokine receptor typ (372 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 2148.9 bits: 406.3 E(85289): 5.9e-113
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 372 aa overlap (7-378:1-372)
10 20 30 40 50 60
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE2 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE2 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
300 310 320 330 340 350
370
pF1KE2 IRRSSMSVEAETTTTFSP
::::::::::::::::::
NP_001 IRRSSMSVEAETTTTFSP
360 370
>>NP_001288647 (OMIM: 600242) C-C chemokine receptor typ (372 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 2148.9 bits: 406.3 E(85289): 5.9e-113
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 372 aa overlap (7-378:1-372)
10 20 30 40 50 60
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE2 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE2 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
300 310 320 330 340 350
370
pF1KE2 IRRSSMSVEAETTTTFSP
::::::::::::::::::
NP_001 IRRSSMSVEAETTTTFSP
360 370
>>NP_001288645 (OMIM: 600242) C-C chemokine receptor typ (372 aa)
initn: 2416 init1: 2416 opt: 2416 Z-score: 2148.9 bits: 406.3 E(85289): 5.9e-113
Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 372 aa overlap (7-378:1-372)
10 20 30 40 50 60
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE2 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE2 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
300 310 320 330 340 350
370
pF1KE2 IRRSSMSVEAETTTTFSP
::::::::::::::::::
NP_001 IRRSSMSVEAETTTTFSP
360 370
>>NP_001288643 (OMIM: 600242) C-C chemokine receptor typ (315 aa)
initn: 2035 init1: 2035 opt: 2035 Z-score: 1814.1 bits: 344.1 E(85289): 2.6e-94
Smith-Waterman score: 2035; 100.0% identity (100.0% similar) in 315 aa overlap (64-378:1-315)
40 50 60 70 80 90
pF1KE2 GDNTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMT
::::::::::::::::::::::::::::::
NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMT
10 20 30
100 110 120 130 140 150
pF1KE2 DTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISID
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE2 RYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI
100 110 120 130 140 150
220 230 240 250 260 270
pF1KE2 TEHVEAFITIQVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEHVEAFITIQVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFI
160 170 180 190 200 210
280 290 300 310 320 330
pF1KE2 VFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKF
220 230 240 250 260 270
340 350 360 370
pF1KE2 RNDLFKLFKDLGCLSQEQLRQWSSCRHIRRSSMSVEAETTTTFSP
:::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNDLFKLFKDLGCLSQEQLRQWSSCRHIRRSSMSVEAETTTTFSP
280 290 300 310
>>NP_001243298 (OMIM: 604738) C-C chemokine receptor typ (357 aa)
initn: 1007 init1: 603 opt: 1007 Z-score: 908.2 bits: 176.7 E(85289): 7.5e-44
Smith-Waterman score: 1007; 41.9% identity (74.6% similar) in 358 aa overlap (28-377:1-352)
10 20 30 40 50
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT-----VDYTLFESLCSKKDVRN
..::: ...:. :.... . : :..::.
NP_001 MADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQ
10 20 30
60 70 80 90 100 110
pF1KE2 FKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWA
: . ::: .: .. .:: :::.::.:.: : :.::::: .:::::.::.:::.::::::
NP_001 FASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWA
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE2 YSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLIS
.:: .: : . .::.. ..:::.:.: .::..:::.:::.::.::. :: : . :: :
NP_001 IAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYS
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE2 KLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI---TEHVEAFITIQVAQMVIGF
:. : ::.::..: :::.:::.... :. :... : .. .. . ....::
NP_001 KMVCFTIWVLAAALCIPEILYSQIKEESGIAI--CTMVYPSDESTKLKSAVLTLKVILGF
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN
..:...:. :: .::.::.::.. ..::.:: :.:..::.. :.::: ..:.::. .
NP_001 FLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYA
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL
. :.: .: ...: ..:: ..: . :.:: ::.:.: .:: :: : .:.:::.:: :
NP_001 MFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQ-
280 290 300 310 320 330
360 370
pF1KE2 RQWSSCRHIRRSSMSVEAETTTTFSP
: : . :..:... . : :
NP_001 --WVSFTR-REGSLKLSSMLLETTSGALSL
340 350
>>NP_006632 (OMIM: 604738) C-C chemokine receptor type 9 (357 aa)
initn: 1007 init1: 603 opt: 1007 Z-score: 908.2 bits: 176.7 E(85289): 7.5e-44
Smith-Waterman score: 1007; 41.9% identity (74.6% similar) in 358 aa overlap (28-377:1-352)
10 20 30 40 50
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT-----VDYTLFESLCSKKDVRN
..::: ...:. :.... . : :..::.
NP_006 MADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQ
10 20 30
60 70 80 90 100 110
pF1KE2 FKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWA
: . ::: .: .. .:: :::.::.:.: : :.::::: .:::::.::.:::.::::::
NP_006 FASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWA
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE2 YSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLIS
.:: .: : . .::.. ..:::.:.: .::..:::.:::.::.::. :: : . :: :
NP_006 IAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYS
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE2 KLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI---TEHVEAFITIQVAQMVIGF
:. : ::.::..: :::.:::.... :. :... : .. .. . ....::
NP_006 KMVCFTIWVLAAALCIPEILYSQIKEESGIAI--CTMVYPSDESTKLKSAVLTLKVILGF
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN
..:...:. :: .::.::.::.. ..::.:: :.:..::.. :.::: ..:.::. .
NP_006 FLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYA
220 230 240 250 260 270
300 310 320 330 340 350
pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL
. :.: .: ...: ..:: ..: . :.:: ::.:.: .:: :: : .:.:::.:: :
NP_006 MFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQ-
280 290 300 310 320 330
360 370
pF1KE2 RQWSSCRHIRRSSMSVEAETTTTFSP
: : . :..:... . : :
NP_006 --WVSFTR-REGSLKLSSMLLETTSGALSL
340 350
>>XP_011531614 (OMIM: 604738) PREDICTED: C-C chemokine r (369 aa)
initn: 1007 init1: 603 opt: 1007 Z-score: 908.1 bits: 176.7 E(85289): 7.7e-44
Smith-Waterman score: 1007; 41.9% identity (74.6% similar) in 358 aa overlap (28-377:13-364)
10 20 30 40 50
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT-----VDYTLFESLCSKKDVRN
..::: ...:. :.... . : :..::.
XP_011 MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQ
10 20 30 40
60 70 80 90 100 110
pF1KE2 FKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWA
: . ::: .: .. .:: :::.::.:.: : :.::::: .:::::.::.:::.::::::
XP_011 FASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE2 YSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLIS
.:: .: : . .::.. ..:::.:.: .::..:::.:::.::.::. :: : . :: :
XP_011 IAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE2 KLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI---TEHVEAFITIQVAQMVIGF
:. : ::.::..: :::.:::.... :. :... : .. .. . ....::
XP_011 KMVCFTIWVLAAALCIPEILYSQIKEESGIAI--CTMVYPSDESTKLKSAVLTLKVILGF
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN
..:...:. :: .::.::.::.. ..::.:: :.:..::.. :.::: ..:.::. .
XP_011 FLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL
. :.: .: ...: ..:: ..: . :.:: ::.:.: .:: :: : .:.:::.:: :
XP_011 MFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQ-
290 300 310 320 330 340
360 370
pF1KE2 RQWSSCRHIRRSSMSVEAETTTTFSP
: : . :..:... . : :
XP_011 --WVSFTR-REGSLKLSSMLLETTSGALSL
350 360
>>NP_112477 (OMIM: 604738) C-C chemokine receptor type 9 (369 aa)
initn: 1007 init1: 603 opt: 1007 Z-score: 908.1 bits: 176.7 E(85289): 7.7e-44
Smith-Waterman score: 1007; 41.9% identity (74.6% similar) in 358 aa overlap (28-377:13-364)
10 20 30 40 50
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT-----VDYTLFESLCSKKDVRN
..::: ...:. :.... . : :..::.
NP_112 MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQ
10 20 30 40
60 70 80 90 100 110
pF1KE2 FKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWA
: . ::: .: .. .:: :::.::.:.: : :.::::: .:::::.::.:::.::::::
NP_112 FASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE2 YSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLIS
.:: .: : . .::.. ..:::.:.: .::..:::.:::.::.::. :: : . :: :
NP_112 IAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYS
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE2 KLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI---TEHVEAFITIQVAQMVIGF
:. : ::.::..: :::.:::.... :. :... : .. .. . ....::
NP_112 KMVCFTIWVLAAALCIPEILYSQIKEESGIAI--CTMVYPSDESTKLKSAVLTLKVILGF
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN
..:...:. :: .::.::.::.. ..::.:: :.:..::.. :.::: ..:.::. .
NP_112 FLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYA
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL
. :.: .: ...: ..:: ..: . :.:: ::.:.: .:: :: : .:.:::.:: :
NP_112 MFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQ-
290 300 310 320 330 340
360 370
pF1KE2 RQWSSCRHIRRSSMSVEAETTTTFSP
: : . :..:... . : :
NP_112 --WVSFTR-REGSLKLSSMLLETTSGALSL
350 360
>>NP_004358 (OMIM: 601835) C-C chemokine receptor type 6 (374 aa)
initn: 539 init1: 317 opt: 955 Z-score: 862.2 bits: 168.2 E(85289): 2.8e-41
Smith-Waterman score: 955; 42.1% identity (73.0% similar) in 366 aa overlap (26-377:13-373)
10 20 30 40 50
pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT---VDYTLFESLCSKKDVRNFK
: : ... ::. :: .. ::: ..::.:.
NP_004 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEML--LCSLQEVRQFS
10 20 30 40
60 70 80 90 100 110
pF1KE2 AWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYS
:.:: ::.:: ::::: :::.:. ..:. ..:::.::::.:.:::::.::::::: :
NP_004 RLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVS
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE2 -AAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISK
:. .:::. :::. .:: ..: ::::: :::.:::.:::::... : :.:.: ::
NP_004 HATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSK
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE2 LSCVGIWILATVLSIPELLYSDLQRSSSEQAMRC----SLITEHVEAFITIQVAQMVIGF
. :. .: :....: .... :. ... . : . ..: .. . . ....::
NP_004 IICLVVWGLSVIISSSTFVFN--QKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGF
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN
..::. : ::: :..::.::.: .:.:::.::::::.::.. :.:.: :.:. :.::..
NP_004 FIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLG
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL
. .:. : .. . :: :: ..::.:: :::::: :::: ..:..::: :. ..
NP_004 KMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYK
290 300 310 320 330 340
360 370
pF1KE2 RQWSSC--RHI----RRSSMSVEAETTTTFSP
. :: :. :..: ... .....:.
NP_004 SSGFSCAGRYSENISRQTSETADNDNASSFTM
350 360 370
378 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 15:46:16 2016 done: Sun Nov 6 15:46:18 2016
Total Scan time: 6.980 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]