Result of FASTA (omim) for
pF1KE1095
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1095, 360 aa
1>>>pF1KE1095 360 - 360 aa - 360 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5332+/-0.000404; mu= 15.3726+/- 0.025
mean_var=81.7771+/-17.242, 0's: 0 Z-trim(112.4): 79 B-trim: 831 in 1/54
Lambda= 0.141827
statistics sampled from 21171 (21250) to 21171 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.625), E-opt: 0.2 (0.249), width: 16
Scan time: 8.090
The best scores are: opt bits E(85289)
NP_001025067 (OMIM: 300526,300894) WD repeat domai ( 360) 2429 507.0 2.6e-143
NP_009006 (OMIM: 300526,300894) WD repeat domain p ( 361) 2417 504.6 1.4e-142
XP_005256434 (OMIM: 609226) PREDICTED: WD repeat d ( 310) 858 185.5 1.4e-46
NP_062559 (OMIM: 609226) WD repeat domain phosphoi ( 344) 858 185.6 1.5e-46
XP_016880351 (OMIM: 609226) PREDICTED: WD repeat d ( 226) 767 166.8 4.2e-41
XP_016880352 (OMIM: 609226) PREDICTED: WD repeat d ( 226) 767 166.8 4.2e-41
NP_001307701 (OMIM: 609224) WD repeat domain phosp ( 364) 356 82.9 1.3e-15
NP_060453 (OMIM: 609224) WD repeat domain phosphoi ( 446) 356 82.9 1.5e-15
NP_001028692 (OMIM: 609225) WD repeat domain phosp ( 384) 319 75.3 2.5e-13
NP_001028691 (OMIM: 609225) WD repeat domain phosp ( 425) 319 75.3 2.7e-13
NP_057087 (OMIM: 609225) WD repeat domain phosphoi ( 436) 319 75.3 2.8e-13
NP_001028690 (OMIM: 609225) WD repeat domain phosp ( 443) 319 75.3 2.8e-13
NP_056425 (OMIM: 609225) WD repeat domain phosphoi ( 454) 319 75.4 2.9e-13
XP_016880297 (OMIM: 609224) PREDICTED: WD repeat d ( 318) 293 69.9 8.7e-12
XP_016867441 (OMIM: 609225) PREDICTED: WD repeat d ( 299) 268 64.8 2.9e-10
XP_006715748 (OMIM: 609225) PREDICTED: WD repeat d ( 310) 268 64.8 3e-10
NP_001265228 (OMIM: 609225) WD repeat domain phosp ( 310) 268 64.8 3e-10
>>NP_001025067 (OMIM: 300526,300894) WD repeat domain ph (360 aa)
initn: 2429 init1: 2429 opt: 2429 Z-score: 2693.9 bits: 507.0 E(85289): 2.6e-143
Smith-Waterman score: 2429; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KE1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 NRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLASTKPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLASTKPG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 TSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPATL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 YCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLASF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE1 TVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
310 320 330 340 350 360
>>NP_009006 (OMIM: 300526,300894) WD repeat domain phosp (361 aa)
initn: 1906 init1: 1906 opt: 2417 Z-score: 2680.6 bits: 504.6 E(85289): 1.4e-142
Smith-Waterman score: 2417; 99.7% identity (99.7% similar) in 361 aa overlap (1-360:1-361)
10 20 30 40 50 60
pF1KE1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRS
10 20 30 40 50 60
70 80 90 100 110
pF1KE1 NLLALVGGGSSPKFSEIS-VLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVL
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
NP_009 NLLALVGGGSSPKFSEISAVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 KNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLASTKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 KNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLASTKP
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 GTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 GTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPAT
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE1 LYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 LYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLAS
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE1 FTVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 FTVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDD
310 320 330 340 350 360
360
pF1KE1 F
:
NP_009 F
>>XP_005256434 (OMIM: 609226) PREDICTED: WD repeat domai (310 aa)
initn: 739 init1: 359 opt: 858 Z-score: 957.5 bits: 185.5 E(85289): 1.4e-46
Smith-Waterman score: 934; 43.3% identity (68.7% similar) in 351 aa overlap (8-357:12-308)
10 20 30 40 50
pF1KE1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEM
:. ::::..:: :.::.: :.::..:: ::
XP_005 MNLLPCNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEK----------------
10 20 30 40
60 70 80 90 100 110
pF1KE1 LHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIV
: .:.:::: :.: :.:. :. : .:..:.:.::
XP_005 -------------------EKQVMIWDDL------KKKTVIEIEFSTEVKAVKLRRDRIV
50 60 70
120 130 140 150 160 170
pF1KE1 IVLKNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLAS
.:: . : :..: ::..: :.: :::::: :::. ...::.::: . : .:::::::
XP_005 VVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHTGHVQLVDLAS
80 90 100 110 120 130
180 190 200 210 220 230
pF1KE1 T-KPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGT
: :: : : ::.. ..:..:: :: .:.::.::::::.:::.: . . :::::.
XP_005 TEKP-----PVDIPAHEGVLSCIALNLQGTRIATASEKGTLIRIFDTSSGHLIQELRRGS
140 150 160 170 180 190
240 250 260 270 280 290
pF1KE1 DPATLYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQW
. :..:::::..:.:..:.:::.::::::: .: . :..:.:: .. .. .: .:.:
XP_005 QAANIYCINFNQDASLICVSSDHGTVHIFAAEDPKRNKQSSLASAS----FLPKYFSSKW
200 210 220 230 240 250
300 310 320 330 340 350
pF1KE1 SLASFTVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDIC
:...: ::. : :::::: . :.:::::.::...:..:.: :.: :... .:..
XP_005 SFSKFQVPSGSPCICAFGTEP----NAVIAICADGSYYKFLFNPKGECIRDVYAQFLEMT
260 270 280 290 300
360
pF1KE1 DDDDF
::
XP_005 DDKL
310
>>NP_062559 (OMIM: 609226) WD repeat domain phosphoinosi (344 aa)
initn: 731 init1: 359 opt: 858 Z-score: 956.9 bits: 185.6 E(85289): 1.5e-46
Smith-Waterman score: 1101; 47.9% identity (75.5% similar) in 351 aa overlap (8-357:12-342)
10 20 30 40 50
pF1KE1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEM
:. ::::..:: :.::.: :.::..:: :: . . . :..: :::
NP_062 MNLLPCNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLE-GGVGHVEM
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 LHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIV
: : : :::::::..::. .:.:::: :.: :.:. :. : .:..:.:.::
NP_062 LFRCNYLALVGGGKKPKYPPNKVMIWDDL------KKKTVIEIEFSTEVKAVKLRRDRIV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE1 IVLKNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLAS
.:: . : :..: ::..: :.: :::::: :::. ...::.::: . : .:::::::
NP_062 VVLDSMIKVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHTGHVQLVDLAS
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE1 T-KPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGT
: :: : : ::.. ..:..:: :: .:.::.::::::.:::.: . . :::::.
NP_062 TEKP-----PVDIPAHEGVLSCIALNLQGTRIATASEKGTLIRIFDTSSGHLIQELRRGS
180 190 200 210 220
240 250 260 270 280 290
pF1KE1 DPATLYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQW
. :..:::::..:.:..:.:::.::::::: .: . :..:.:: .. .. .: .:.:
NP_062 QAANIYCINFNQDASLICVSSDHGTVHIFAAEDPKRNKQSSLASAS----FLPKYFSSKW
230 240 250 260 270 280
300 310 320 330 340 350
pF1KE1 SLASFTVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDIC
:...: ::. : :::::: . :.:::::.::...:..:.: :.: :... .:..
NP_062 SFSKFQVPSGSPCICAFGTEP----NAVIAICADGSYYKFLFNPKGECIRDVYAQFLEMT
290 300 310 320 330 340
360
pF1KE1 DDDDF
::
NP_062 DDKL
>>XP_016880351 (OMIM: 609226) PREDICTED: WD repeat domai (226 aa)
initn: 592 init1: 359 opt: 767 Z-score: 858.8 bits: 166.8 E(85289): 4.2e-41
Smith-Waterman score: 767; 48.7% identity (77.5% similar) in 236 aa overlap (123-357:2-224)
100 110 120 130 140 150
pF1KE1 EKLVLEFTFTKPVLSVRMRHDKIVIVLKNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCP
: :..: ::..: :.: :::::: :::
XP_016 MIKVFTFTHNPHQLHVFETCYNPKGLCVLCP
10 20 30
160 170 180 190 200 210
pF1KE1 SLEKQLLVFPGHKCGSLQLVDLAST-KPGTSSAPFTINAHQSDIACVSLNQPGTVVASAS
. ...::.::: . : .:::::::: :: : : ::.. ..:..:: :: .:.::
XP_016 NSNNSLLAFPGTHTGHVQLVDLASTEKP-----PVDIPAHEGVLSCIALNLQGTRIATAS
40 50 60 70 80
220 230 240 250 260 270
pF1KE1 QKGTLIRLFDTQSKEKLVELRRGTDPATLYCINFSHDSSFLCASSDKGTVHIFALKDTRL
.::::::.:::.: . . :::::.. :..:::::..:.:..:.:::.::::::: .: .
XP_016 EKGTLIRIFDTSSGHLIQELRRGSQAANIYCINFNQDASLICVSSDHGTVHIFAAEDPKR
90 100 110 120 130 140
280 290 300 310 320 330
pF1KE1 NRRSALARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGRNTSKNVNSVIAICVDGT
:..:.:: .. .. .: .:.::...: ::. : :::::: . :.:::::.::.
XP_016 NKQSSLASAS----FLPKYFSSKWSFSKFQVPSGSPCICAFGTEP----NAVIAICADGS
150 160 170 180 190
340 350 360
pF1KE1 FHKYVFTPDGNCNREAFDVYLDICDDDDF
..:..:.: :.: :... .:.. ::
XP_016 YYKFLFNPKGECIRDVYAQFLEMTDDKL
200 210 220
>>XP_016880352 (OMIM: 609226) PREDICTED: WD repeat domai (226 aa)
initn: 592 init1: 359 opt: 767 Z-score: 858.8 bits: 166.8 E(85289): 4.2e-41
Smith-Waterman score: 767; 48.7% identity (77.5% similar) in 236 aa overlap (123-357:2-224)
100 110 120 130 140 150
pF1KE1 EKLVLEFTFTKPVLSVRMRHDKIVIVLKNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCP
: :..: ::..: :.: :::::: :::
XP_016 MIKVFTFTHNPHQLHVFETCYNPKGLCVLCP
10 20 30
160 170 180 190 200 210
pF1KE1 SLEKQLLVFPGHKCGSLQLVDLAST-KPGTSSAPFTINAHQSDIACVSLNQPGTVVASAS
. ...::.::: . : .:::::::: :: : : ::.. ..:..:: :: .:.::
XP_016 NSNNSLLAFPGTHTGHVQLVDLASTEKP-----PVDIPAHEGVLSCIALNLQGTRIATAS
40 50 60 70 80
220 230 240 250 260 270
pF1KE1 QKGTLIRLFDTQSKEKLVELRRGTDPATLYCINFSHDSSFLCASSDKGTVHIFALKDTRL
.::::::.:::.: . . :::::.. :..:::::..:.:..:.:::.::::::: .: .
XP_016 EKGTLIRIFDTSSGHLIQELRRGSQAANIYCINFNQDASLICVSSDHGTVHIFAAEDPKR
90 100 110 120 130 140
280 290 300 310 320 330
pF1KE1 NRRSALARVGKVGPMIGQYVDSQWSLASFTVPAESACICAFGRNTSKNVNSVIAICVDGT
:..:.:: .. .. .: .:.::...: ::. : :::::: . :.:::::.::.
XP_016 NKQSSLASAS----FLPKYFSSKWSFSKFQVPSGSPCICAFGTEP----NAVIAICADGS
150 160 170 180 190
340 350 360
pF1KE1 FHKYVFTPDGNCNREAFDVYLDICDDDDF
..:..:.: :.: :... .:.. ::
XP_016 YYKFLFNPKGECIRDVYAQFLEMTDDKL
200 210 220
>>NP_001307701 (OMIM: 609224) WD repeat domain phosphoin (364 aa)
initn: 240 init1: 152 opt: 356 Z-score: 401.4 bits: 82.9 E(85289): 1.3e-15
Smith-Waterman score: 356; 35.7% identity (67.0% similar) in 182 aa overlap (96-273:12-186)
70 80 90 100 110 120
pF1KE1 VGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLKNRIYV
. ...... .::.:. ...... :.. ::.
NP_001 MNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEESIYI
10 20 30 40
130 140 150 160 170 180
pF1KE1 YSFPDNPRKLFE--FDTRDNPKGLCDLCPSLEKQLLVFPGH-KCGSLQLVDLASTKPGTS
... : ::.. .: :: ::: : . .. :..:: : . : : : :
NP_001 HNIKDM--KLLKTLLDIPANPTGLCALSINHSNSYLAYPGSLTSGEIVLYDGNSLK----
50 60 70 80 90
190 200 210 220 230 240
pF1KE1 SAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDP-ATLY
. :: ::.. .: ...: :. .::::.:::.::.:.. . .:: :.::: .:.
NP_001 -TVCTIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTIS
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE1 CINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPMIGQYVDSQWSLASFT
. :: ::.::::::. ::::: :... .:
NP_001 SLVFSMDSQFLCASSNTETVHIFKLEQVTNSRPEEPSTWSGYMGKMFMAATNYLPTQVSD
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE1 VPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NP_001 MMHQDRAFATARLNFSGQRNICTLSTIQKLPRLLVASSSGHLYMYNLDPQDGGECVLIKT
220 230 240 250 260 270
>>NP_060453 (OMIM: 609224) WD repeat domain phosphoinosi (446 aa)
initn: 271 init1: 152 opt: 356 Z-score: 400.2 bits: 82.9 E(85289): 1.5e-15
Smith-Waterman score: 395; 30.3% identity (63.8% similar) in 271 aa overlap (9-273:17-268)
10 20 30 40 50
pF1KE1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPL--MEKGHLDHEQVGS
.. . :::: . . . ..: ..... . ... : ..: . .
NP_060 MEAEAADAPPGGVESALSCFSFNQDCTSLATGTKAGYKLFSLSSVEQLDQVHGSNE-IPD
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 MGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRM
. .:: : :.:...: : : ...: . ..: . . ...... .::.:.
NP_060 VYIVERLFSSSLVVVV---SHTKPRQMNVYHF---KKGTE-----ICNYSYSSNILSIRL
60 70 80 90 100
120 130 140 150 160
pF1KE1 RHDKIVIVLKNRIYVYSFPDNPRKLFE--FDTRDNPKGLCDLCPSLEKQLLVFPGH-KCG
...... :.. ::.... : ::.. .: :: ::: : . .. :..:: :
NP_060 NRQRLLVCLEESIYIHNIKDM--KLLKTLLDIPANPTGLCALSINHSNSYLAYPGSLTSG
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE1 SLQLVDLASTKPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEK
. : : : : . :: ::.. .: ...: :. .::::.:::.::.:.. . .:
NP_060 EIVLYDGNSLK-----TVCTIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQK
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE1 LVELRRGTDP-ATLYCINFSHDSSFLCASSDKGTVHIFALKDTRLNRRSALARVGKVGPM
: :.::: .:. . :: ::.::::::. ::::: :... .:
NP_060 LYEFRRGMKRYVTISSLVFSMDSQFLCASSNTETVHIFKLEQVTNSRPEEPSTWSGYMGK
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE1 IGQYVDSQWSLASFTVPAESACICAFGRNTSKNVNSVIAICVDGTFHKYVFTPDGNCNRE
NP_060 MFMAATNYLPTQVSDMMHQDRAFATARLNFSGQRNICTLSTIQKLPRLLVASSSGHLYMY
290 300 310 320 330 340
>>NP_001028692 (OMIM: 609225) WD repeat domain phosphoin (384 aa)
initn: 260 init1: 138 opt: 319 Z-score: 360.2 bits: 75.3 E(85289): 2.5e-13
Smith-Waterman score: 335; 26.6% identity (57.1% similar) in 308 aa overlap (53-343:19-308)
30 40 50 60 70 80
pF1KE1 CAMETGVRIYNVEPLMEKGHLDHEQVGSMGLVEMLHRSNLLALVGGGSSPKFSEISVLIW
.:: : :.:.:.:. ..:. .. .
NP_001 MFTHVLPFVISADTEDVCIVERLFSSSLVAIVSL-KAPRKLKVCHF--
10 20 30 40
90 100 110 120 130 140
pF1KE1 DDAREGKDSKEKLVLEFTFTKPVLSVRMRHDKIVIVLKNRIYVYSFPDNPRKLFEFDTRD
..: . . ...... .:.:.. ...... :.. .:.... : .:
NP_001 ---KKGTE-----ICNYSYSNTILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPP
50 60 70 80 90
150 160 170 180 190 200
pF1KE1 NPKGLCDLCPSLEKQLLVFPGHKC-GSLQLVDLASTKPGTSSAPFTINAHQSDIACVSLN
:: ::: : . .. :..:: : .:. : . . : : ::.: .: ....
NP_001 NPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLR-----AANMIPAHDSPLAALAFD
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE1 QPGTVVASASQKGTLIRLFDTQSKEKLVELRRGTDPATLYC-INFSHDSSFLCASSDKGT
:: .:.::.:::.::.:. .:: :.:::. . : . :: :. :: :::. :
NP_001 ASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTET
160 170 180 190 200 210
270 280 290 300
pF1KE1 VHIFALKDTRLNR----RSALARVGKVGPMIGQYVDSQWS--------LASFTVP-AESA
:::: :. .. . . . ::: .:. :: . .:. .:
NP_001 VHIFKLETVKEKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHK
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE1 CICAFGRNTSKNVNSVIAICVDGTFHKYVFTPD--GNCNREAFDVYLDICDDDDF
::... : ... ... .:: .. : . :. :.:
NP_001 NICSLA--TIQKIPRLLVGAADGYLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSA
280 290 300 310 320 330
NP_001 SHDCPLVTQTYGAAAGKAYTDDLGAVGGACLEDEASALRLDEDSEHPPMILRTD
340 350 360 370 380
>>NP_001028691 (OMIM: 609225) WD repeat domain phosphoin (425 aa)
initn: 293 init1: 138 opt: 319 Z-score: 359.6 bits: 75.3 E(85289): 2.7e-13
Smith-Waterman score: 359; 25.9% identity (57.3% similar) in 351 aa overlap (14-343:20-349)
10 20 30 40 50
pF1KE1 MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPL--MEKGH--LDHEQVGS
::::.. . . ..: ..... . .:. . : :.:
NP_001 MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDV--
10 20 30 40 50
60 70 80 90 100 110
pF1KE1 MGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKEKLVLEFTFTKPVLSVRM
.:: : :.:.:.:. ..:. .. . ..: . . ...... .:.:..
NP_001 -CIVERLFSSSLVAIVSL-KAPRKLKVCHF-----KKGTE-----ICNYSYSNTILAVKL
60 70 80 90 100
120 130 140 150 160
pF1KE1 RHDKIVIVLKNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKC-GSL
...... :.. .:.... : .: :: ::: : . .. :..:: : .
NP_001 NRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEV
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE1 QLVDLASTKPGTSSAPFTINAHQSDIACVSLNQPGTVVASASQKGTLIRLFDTQSKEKLV
:. : . . : : ::.: .: .... :: .:.::.:::.::.:. .::
NP_001 QVFDTINLR-----AANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLF
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE1 ELRRGTDPATLYC-INFSHDSSFLCASSDKGTVHIFALKDTRLNR----RSALARVGKVG
:.:::. . : . :: :. :: :::. ::::: :. .. . . . :::
NP_001 EFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVL
230 240 250 260 270 280
290 300 310 320 330
pF1KE1 PMIGQYVDSQWS--------LASFTVP-AESACICAFGRNTSKNVNSVIAICVDGTFHKY
.:. :: . .:. .: ::... : ... ... .:: .. :
NP_001 MASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLA--TIQKIPRLLVGAADGYLYMY
290 300 310 320 330
340 350 360
pF1KE1 VFTPD--GNCNREAFDVYLDICDDDDF
. :. :.:
NP_001 NLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAAAGKAYTDDLGAVGG
340 350 360 370 380 390
360 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 19:08:02 2016 done: Sat Nov 5 19:08:04 2016
Total Scan time: 8.090 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]