Result of FASTA (ccds) for
pF1KE1004
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1004, 162 aa
1>>>pF1KE1004 162 - 162 aa - 162 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7669+/-0.000667; mu= 14.7103+/- 0.040
mean_var=56.2261+/-11.242, 0's: 0 Z-trim(109.1): 16 B-trim: 207 in 1/51
Lambda= 0.171043
statistics sampled from 10661 (10672) to 10661 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.328), width: 16
Scan time: 1.600
The best scores are: opt bits E(32554)
CCDS8047.1 PLA2G16 gene_id:11145|Hs108|chr11 ( 162) 1068 271.0 2.2e-73
CCDS8046.1 HRASLS2 gene_id:54979|Hs108|chr11 ( 162) 728 187.2 3.9e-48
CCDS41662.1 RARRES3 gene_id:5920|Hs108|chr11 ( 164) 543 141.5 2.2e-34
CCDS3303.2 HRASLS gene_id:57110|Hs108|chr3 ( 273) 487 127.8 4.8e-30
CCDS53646.1 HRASLS5 gene_id:117245|Hs108|chr11 ( 269) 455 119.9 1.1e-27
CCDS8044.1 HRASLS5 gene_id:117245|Hs108|chr11 ( 279) 455 119.9 1.2e-27
CCDS53647.1 HRASLS5 gene_id:117245|Hs108|chr11 ( 253) 353 94.7 4.1e-20
>>CCDS8047.1 PLA2G16 gene_id:11145|Hs108|chr11 (162 aa)
initn: 1068 init1: 1068 opt: 1068 Z-score: 1431.0 bits: 271.0 E(32554): 2.2e-73
Smith-Waterman score: 1068; 100.0% identity (100.0% similar) in 162 aa overlap (1-162:1-162)
10 20 30 40 50 60
pF1KE1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS80 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL
70 80 90 100 110 120
130 140 150 160
pF1KE1 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ
::::::::::::::::::::::::::::::::::::::::::
CCDS80 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ
130 140 150 160
>>CCDS8046.1 HRASLS2 gene_id:54979|Hs108|chr11 (162 aa)
initn: 729 init1: 709 opt: 728 Z-score: 977.6 bits: 187.2 E(32554): 3.9e-48
Smith-Waterman score: 728; 69.4% identity (89.8% similar) in 157 aa overlap (6-162:6-162)
10 20 30 40 50 60
pF1KE1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV
:.:. :::::: : : :::::::::::::::: ::.::::::::.::::.::::
CCDS80 MALARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAPASEIAGAGAASVLSALTNKAIV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL
::::: :::.:.:.:::::::.:.::: .::..:::::::::. :.:::.:::::::.:
CCDS80 KKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRAEELVGQELPYSLTSDNCEHFVNHL
70 80 90 100 110 120
130 140 150 160
pF1KE1 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ
::::.::::: .. ...::. ::: ::.:....:.::..:
CCDS80 RYGVSRSDQVTGAVTTVGVAAGLLAAASLVGILLARSKRERQ
130 140 150 160
>>CCDS41662.1 RARRES3 gene_id:5920|Hs108|chr11 (164 aa)
initn: 514 init1: 514 opt: 543 Z-score: 730.8 bits: 141.5 E(32554): 2.2e-34
Smith-Waterman score: 543; 51.2% identity (77.8% similar) in 162 aa overlap (1-162:1-161)
10 20 30 40 50 60
pF1KE1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEVAGAGAASVMSALTDKAIV
: .: :::::::::::: :.:::.:.:::::.::::::: :::..::.:.:...: :
CCDS41 MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPSEYPGAGSSSVFSVLSNSAEV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 KKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQEVLYKLTSENCEHFVNEL
:.: : ::.:. :.:::. : .:.: : ::. :.:.:::.. :...:.::::::..:
CCDS41 KRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNCEHFVTQL
70 80 90 100 110 120
130 140 150 160
pF1KE1 RYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ
::: .: ::. . . ..:: .:. . . : :. . ::.
CCDS41 RYGKSRCKQVEKAKVEVGVA-TALGILVVAGCSFAIRRYQKKATA
130 140 150 160
>>CCDS3303.2 HRASLS gene_id:57110|Hs108|chr3 (273 aa)
initn: 454 init1: 285 opt: 487 Z-score: 652.9 bits: 127.8 E(32554): 4.8e-30
Smith-Waterman score: 487; 46.8% identity (79.2% similar) in 154 aa overlap (8-161:120-271)
10 20 30
pF1KE1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLA
: ::::::.::: :.:::.:.:::::...:
CCDS33 TQLPPGARRRPRLESEMAFNDCFSLNYPGNPCPGDLIEVFRPGYQHWALYLGDGYVINIA
90 100 110 120 130 140
40 50 60 70 80 90
pF1KE1 PPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAE
: . . :. .:. :....::.:: .:: ::.:.: :..:::.:. : ::: .::.:.:
CCDS33 PVDGIP-ASFTSAKSVFSSKALVKMQLLKDVVGNDTYRINNKYDETYPPLPVEEIIKRSE
150 160 170 180 190 200
100 110 120 130 140 150
pF1KE1 ELVGQEVLYKLTSENCEHFVNELRYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRN
..:::: :.: .::::::. :::: . :.:. .: .. . .....:..: .: ..
CCDS33 FVIGQEVAYNLLVNNCEHFVTLLRYGEGVSEQANRAISTVEFVTAAVGVFSFLG-LFPKG
210 220 230 240 250 260
160
pF1KE1 KRQKQ
.: :
CCDS33 QRAKYY
270
>>CCDS53646.1 HRASLS5 gene_id:117245|Hs108|chr11 (269 aa)
initn: 419 init1: 237 opt: 455 Z-score: 610.3 bits: 119.9 E(32554): 1.1e-27
Smith-Waterman score: 455; 52.4% identity (75.5% similar) in 143 aa overlap (6-147:118-258)
10 20 30
pF1KE1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVH
:.:.::::::::: :.:::::: : :::
CCDS53 ETTPSQKADWSSIPKPENEGKLIKQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVH
90 100 110 120 130 140
40 50 60 70 80 90
pF1KE1 LAPPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQR
:::::: .: :. : ....:.:: : :: . ...:::: : : ::: .:::::
CCDS53 LAPPSEEFEVG--SITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQR
150 160 170 180 190 200
100 110 120 130 140 150
pF1KE1 AEELVGQEVLYKLTSENCEHFVNELRYGVARSDQVRDVII-AASVAGMGLAAMSLIGVMF
....:.. : :.: ::::::: ::::: ::.::. ... .:..:: ..:.
CCDS53 TKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISAVVDSIKPK
210 220 230 240 250 260
160
pF1KE1 SRNKRQKQ
CCDS53 PITA
>>CCDS8044.1 HRASLS5 gene_id:117245|Hs108|chr11 (279 aa)
initn: 419 init1: 237 opt: 455 Z-score: 610.1 bits: 119.9 E(32554): 1.2e-27
Smith-Waterman score: 455; 52.4% identity (75.5% similar) in 143 aa overlap (6-147:128-268)
10 20 30
pF1KE1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVH
:.:.::::::::: :.:::::: : :::
CCDS80 ETTPSQKADWSSIPKPENEGKLIKQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVH
100 110 120 130 140 150
40 50 60 70 80 90
pF1KE1 LAPPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQR
:::::: .: :. : ....:.:: : :: . ...:::: : : ::: .:::::
CCDS80 LAPPSEEFEVG--SITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQR
160 170 180 190 200 210
100 110 120 130 140 150
pF1KE1 AEELVGQEVLYKLTSENCEHFVNELRYGVARSDQVRDVII-AASVAGMGLAAMSLIGVMF
....:.. : :.: ::::::: ::::: ::.::. ... .:..:: ..:.
CCDS80 TKKMVNKIVQYSLIEGNCEHFVNGLRYGVPRSQQVEHALMEGAKAAGAVISAVVDSIKPK
220 230 240 250 260 270
160
pF1KE1 SRNKRQKQ
CCDS80 PITA
>>CCDS53647.1 HRASLS5 gene_id:117245|Hs108|chr11 (253 aa)
initn: 354 init1: 196 opt: 353 Z-score: 474.7 bits: 94.7 E(32554): 4.1e-20
Smith-Waterman score: 353; 52.8% identity (73.1% similar) in 108 aa overlap (6-113:128-233)
10 20 30
pF1KE1 MRAPIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVH
:.:.::::::::: :.:::::: : :::
CCDS53 ETTPSQKADWSSIPKPENEGKLIKQAAEGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVH
100 110 120 130 140 150
40 50 60 70 80 90
pF1KE1 LAPPSEVAGAGAASVMSALTDKAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQR
:::::: .: :. : ....:.:: : :: . ...:::: : : ::: .:::::
CCDS53 LAPPSEEFEVG--SITSIFSNRAVVKYSRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQR
160 170 180 190 200 210
100 110 120 130 140 150
pF1KE1 AEELVGQEVLYKLTSENCEHFVNELRYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFS
....:.. : :.: ::
CCDS53 TKKMVNKIVQYSLIEGNCRARPDGRSEGCWSSYFSCSG
220 230 240 250
162 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 13:21:23 2016 done: Sat Nov 5 13:21:23 2016
Total Scan time: 1.600 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]