FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0902, 151 aa
  1>>>pF1KE0902 151 - 151 aa - 151 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.2310+/-0.000582; mu= 9.0125+/- 0.035
 mean_var=93.7016+/-18.507, 0's: 0 Z-trim(115.2): 3  B-trim: 0 in 0/52
 Lambda= 0.132495
 statistics sampled from 15784 (15787) to 15784 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.83), E-opt: 0.2 (0.485), width:  16
 Scan time:  2.120

The best scores are:                                      opt bits E(32554)
CCDS139.1 NPPA gene_id:4878|Hs108|chr1             ( 151) 1007 201.1 2.1e-52


>>CCDS139.1 NPPA gene_id:4878|Hs108|chr1                  (151 aa)
 initn: 1007 init1: 1007 opt: 1007  Z-score: 1054.3  bits: 201.1 E(32554): 2.1e-52
Smith-Waterman score: 1007; 100.0% identity (100.0% similar) in 151 aa overlap (1-151:1-151)

               10        20        30        40        50        60
pF1KE0 MSSFSTTTVSFLLLLAFQLLGQTRANPMYNAVSNADLMDFKNLLDHLEEKMPLEDEVVPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MSSFSTTTVSFLLLLAFQLLGQTRANPMYNAVSNADLMDFKNLLDHLEEKMPLEDEVVPP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 QVLSEPNEEAGAALSPLPEVPPWTGEVSPAQRDGGALGRGPWDSSDRSALLKSKLRALLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 QVLSEPNEEAGAALSPLPEVPPWTGEVSPAQRDGGALGRGPWDSSDRSALLKSKLRALLT
               70        80        90       100       110       120

              130       140       150 
pF1KE0 APRSLRRSSCFGGRMDRIGAQSGLGCNSFRY
       :::::::::::::::::::::::::::::::
CCDS13 APRSLRRSSCFGGRMDRIGAQSGLGCNSFRY
              130       140       150 




151 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 04:24:40 2016 done: Sat Nov  5 04:24:41 2016
 Total Scan time:  2.120 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]