Result of FASTA (ccds) for
pF1KE0801
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0801, 356 aa
1>>>pF1KE0801 356 - 356 aa - 356 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0955+/-0.00125; mu= 11.4727+/- 0.073
mean_var=127.1351+/-40.947, 0's: 0 Z-trim(102.6): 258 B-trim: 995 in 2/45
Lambda= 0.113747
statistics sampled from 6642 (7039) to 6642 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.567), E-opt: 0.2 (0.216), width: 16
Scan time: 2.530
The best scores are: opt bits E(32554)
CCDS33295.1 CXCR4 gene_id:7852|Hs108|chr2 ( 356) 2349 397.7 7.8e-111
CCDS46420.1 CXCR4 gene_id:7852|Hs108|chr2 ( 352) 2292 388.4 5.1e-108
CCDS2656.1 CCR4 gene_id:1233|Hs108|chr3 ( 360) 807 144.7 1.2e-34
CCDS14416.1 CXCR3 gene_id:2833|Hs108|chrX ( 368) 758 136.6 3.1e-32
CCDS48135.1 CXCR3 gene_id:2833|Hs108|chrX ( 415) 758 136.7 3.4e-32
CCDS2409.1 CXCR1 gene_id:3577|Hs108|chr2 ( 350) 751 135.5 6.7e-32
CCDS77026.1 CCR7 gene_id:1236|Hs108|chr17 ( 372) 749 135.2 8.8e-32
CCDS11369.1 CCR7 gene_id:1236|Hs108|chr17 ( 378) 749 135.2 8.9e-32
CCDS2732.1 CCR9 gene_id:10803|Hs108|chr3 ( 369) 740 133.7 2.4e-31
CCDS2408.1 CXCR2 gene_id:3579|Hs108|chr2 ( 360) 738 133.3 3e-31
CCDS2733.1 CCR9 gene_id:10803|Hs108|chr3 ( 357) 737 133.2 3.4e-31
CCDS54571.1 CX3CR1 gene_id:1524|Hs108|chr3 ( 387) 723 130.9 1.7e-30
CCDS43069.1 CX3CR1 gene_id:1524|Hs108|chr3 ( 355) 716 129.7 3.6e-30
CCDS8402.1 CXCR5 gene_id:643|Hs108|chr11 ( 372) 712 129.1 5.9e-30
CCDS43078.1 CCR2 gene_id:729230|Hs108|chr3 ( 374) 710 128.8 7.5e-30
CCDS46813.1 CCR2 gene_id:729230|Hs108|chr3 ( 360) 702 127.4 1.8e-29
CCDS2684.1 CCR8 gene_id:1237|Hs108|chr3 ( 355) 700 127.1 2.2e-29
CCDS5298.1 CCR6 gene_id:1235|Hs108|chr6 ( 374) 697 126.6 3.3e-29
CCDS2706.1 ACKR2 gene_id:1238|Hs108|chr3 ( 384) 688 125.2 9.3e-29
CCDS2739.1 CCR5 gene_id:1234|Hs108|chr3 ( 352) 679 123.7 2.4e-28
CCDS54574.1 CCR3 gene_id:1232|Hs108|chr3 ( 376) 679 123.7 2.6e-28
CCDS2738.1 CCR3 gene_id:1232|Hs108|chr3 ( 355) 677 123.3 3.1e-28
CCDS3075.1 ACKR4 gene_id:51554|Hs108|chr3 ( 350) 676 123.2 3.4e-28
CCDS2735.1 CXCR6 gene_id:10663|Hs108|chr3 ( 342) 674 122.8 4.2e-28
CCDS2737.1 CCR1 gene_id:1230|Hs108|chr3 ( 355) 668 121.9 8.6e-28
CCDS2736.1 XCR1 gene_id:2829|Hs108|chr3 ( 333) 608 112.0 7.5e-25
CCDS2516.1 ACKR3 gene_id:57007|Hs108|chr2 ( 362) 608 112.0 8e-25
CCDS3137.1 AGTR1 gene_id:185|Hs108|chr3 ( 359) 592 109.4 4.9e-24
CCDS82855.1 AGTR1 gene_id:185|Hs108|chr3 ( 388) 592 109.4 5.2e-24
CCDS82854.1 AGTR1 gene_id:185|Hs108|chr3 ( 394) 592 109.4 5.2e-24
CCDS11435.1 CCR10 gene_id:2826|Hs108|chr17 ( 362) 571 105.9 5.4e-23
CCDS10429.1 SSTR5 gene_id:6755|Hs108|chr16 ( 364) 546 101.8 9.3e-22
CCDS9666.1 SSTR1 gene_id:6751|Hs108|chr14 ( 391) 529 99.1 6.7e-21
CCDS42856.1 SSTR4 gene_id:6754|Hs108|chr20 ( 388) 516 96.9 2.9e-20
CCDS2931.1 GPR15 gene_id:2838|Hs108|chr3 ( 360) 510 95.9 5.5e-20
CCDS2368.1 GPR1 gene_id:2825|Hs108|chr2 ( 355) 482 91.3 1.3e-18
CCDS9482.1 OXGR1 gene_id:27199|Hs108|chr13 ( 337) 479 90.8 1.8e-18
CCDS9894.2 GPR68 gene_id:8111|Hs108|chr14 ( 365) 470 89.4 5.3e-18
CCDS11691.1 SSTR2 gene_id:6752|Hs108|chr17 ( 369) 466 88.7 8.4e-18
CCDS14441.1 LPAR4 gene_id:2846|Hs108|chrX ( 370) 466 88.7 8.4e-18
CCDS33063.1 C5AR1 gene_id:728|Hs108|chr19 ( 350) 462 88.0 1.3e-17
CCDS13944.1 SSTR3 gene_id:6753|Hs108|chr22 ( 418) 459 87.6 2e-17
CCDS43079.1 CCRL2 gene_id:9034|Hs108|chr3 ( 344) 457 87.2 2.2e-17
CCDS46814.1 CCRL2 gene_id:9034|Hs108|chr3 ( 356) 457 87.2 2.3e-17
CCDS8927.1 GPR182 gene_id:11318|Hs108|chr12 ( 404) 457 87.3 2.5e-17
CCDS9412.1 CYSLTR2 gene_id:57105|Hs108|chr13 ( 346) 455 86.9 2.8e-17
CCDS1124.1 RXFP4 gene_id:339403|Hs108|chr1 ( 374) 455 86.9 3e-17
CCDS14439.1 CYSLTR1 gene_id:10800|Hs108|chrX ( 337) 451 86.2 4.3e-17
CCDS14398.1 P2RY4 gene_id:5030|Hs108|chrX ( 365) 446 85.4 8.1e-17
CCDS13556.1 OPRL1 gene_id:4987|Hs108|chr20 ( 370) 446 85.4 8.2e-17
>>CCDS33295.1 CXCR4 gene_id:7852|Hs108|chr2 (356 aa)
initn: 2349 init1: 2349 opt: 2349 Z-score: 2103.3 bits: 397.7 E(32554): 7.8e-111
Smith-Waterman score: 2349; 100.0% identity (100.0% similar) in 356 aa overlap (1-356:1-356)
10 20 30 40 50 60
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 TVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFAN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 VSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 ALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCC
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 LNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
310 320 330 340 350
>>CCDS46420.1 CXCR4 gene_id:7852|Hs108|chr2 (352 aa)
initn: 2292 init1: 2292 opt: 2292 Z-score: 2052.8 bits: 388.4 E(32554): 5.1e-108
Smith-Waterman score: 2292; 99.4% identity (100.0% similar) in 349 aa overlap (8-356:4-352)
10 20 30 40 50 60
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGN
..:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MEGISIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGN
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 GLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 TVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 TVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFAN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE0 VSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 VSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRK
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE0 ALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 ALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCC
240 250 260 270 280 290
310 320 330 340 350
pF1KE0 LNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 LNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
300 310 320 330 340 350
>>CCDS2656.1 CCR4 gene_id:1233|Hs108|chr3 (360 aa)
initn: 771 init1: 486 opt: 807 Z-score: 735.7 bits: 144.7 E(32554): 1.2e-34
Smith-Waterman score: 807; 38.0% identity (68.0% similar) in 334 aa overlap (25-356:22-350)
10 20 30 40 50 60
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGN
:.:. .:: .: :...::: .::..:. :..::
CCDS26 MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGN
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 GLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIY
..:.::. :.:::::: : :.:...:::::..::::. :. .: :: ::: . .:
CCDS26 SVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMY
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 TVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFAN
:..::..... ..:.:::::::::. : : : : .. ...: :.. ..: :.:..
CCDS26 LVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFST
120 130 140 150 160 170
190 200 210 220 230
pF1KE0 VSEADDRYICDRFYP--NDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQK
.. : : . : :. ... ..::..: ..: :: .:: :.: :...:
CCDS26 CYTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 RKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFH
::.: ... :.. : :: : . ..... ::.. : : :: . :. ::.::: :
CCDS26 NKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVL-QDCTFERYLDYAIQATETLAFVH
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 CCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
::::::.: ::: ::. . : .. :: : .: . : . :... :::. .:
CCDS26 CCLNPIIYFFLGEKFRKYILQ-LFKTCRG--LFVLCQYC-GLLQIYSADTPSSSYTQSTM
300 310 320 330 340 350
CCDS26 DHDLHDAL
360
>>CCDS14416.1 CXCR3 gene_id:2833|Hs108|chrX (368 aa)
initn: 730 init1: 456 opt: 758 Z-score: 692.1 bits: 136.6 E(32554): 3.1e-32
Smith-Waterman score: 758; 35.2% identity (68.2% similar) in 352 aa overlap (7-353:19-357)
10 20 30 40
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDS--MKEPCFREENANFNKIFLP
::. ..: . ..: .. :: . :: .. . ::.. :::
CCDS14 MVLEVSDHQVLNDAEVAALLENFSS---SYDYGENESDSCCTSPPCPQDFSLNFDRAFLP
10 20 30 40 50
50 60 70 80 90 100
pF1KE0 TIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANW
..::..:: :..::: : :. .. : :: . :::.::: :.:.:::.:::::...:
CCDS14 ALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQW
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 YFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWI
::. :::.. .....:.:...:.:: ::.:::: :::::. : .. ..::
CCDS14 VFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWG
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 PALLLTIPDFIFANVSEADDRYI---CDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCY
::...::::: . .. :.: :. .:. . .... ....:..:: .:. ::
CCDS14 LCLLFALPDFIFLS-AHHDERLNATHCQYNFPQ-VGRTALRVLQLVAGFLLPLLVMAYCY
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 CIIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENT
:.. : :.:... .:.. .:....:: :: ::.. . .: .. : . ..: :.
CCDS14 AHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESR
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE0 VHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSS
: :.: .:...::::::.::::.:.::. : :.. ..:: . .
CCDS14 VDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLL--------LRLGCPNQRGLQRQ
300 310 320 330 340
350
pF1KE0 VSTESESSSFHSS
:. ..::.
CCDS14 PSSSRRDSSWSETSEASYSGL
350 360
>>CCDS48135.1 CXCR3 gene_id:2833|Hs108|chrX (415 aa)
initn: 730 init1: 456 opt: 758 Z-score: 691.4 bits: 136.7 E(32554): 3.4e-32
Smith-Waterman score: 758; 35.2% identity (68.2% similar) in 352 aa overlap (7-353:66-404)
10 20 30
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDS--MKEPCFR
::. ..: . ..: .. :: . :: .
CCDS48 LPGLYTAPSSPFPPSQVSDHQVLNDAEVAALLENFSS---SYDYGENESDSCCTSPPCPQ
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE0 EENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVIT
. . ::.. :::..::..:: :..::: : :. .. : :: . :::.::: :.:.:
CCDS48 DFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLT
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE0 LPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKL
::.:::::...: ::. :::.. .....:.:...:.:: ::.:::: :::::. :
CCDS48 LPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPP
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE0 LAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYI---CDRFYPNDLWVVVFQFQHIMVG
.. ..:: ::...::::: . .. :.: :. .:. . .... ....:
CCDS48 ARVTLTCLAVWGLCLLFALPDFIFLS-AHHDERLNATHCQYNFPQ-VGRTALRVLQLVAG
220 230 240 250 260 270
220 230 240 250 260 270
pF1KE0 LILPGIVILSCYCIIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILL
..:: .:. :: :.. : :.:... .:.. .:....:: :: ::.. . .: .. :
CCDS48 FLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDL
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE0 EIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLK
. ..: :. : :.: .:...::::::.::::.:.::. : :.
CCDS48 GALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLL--------LR
340 350 360 370 380
340 350
pF1KE0 ILSKGKRGGHSSVSTESESSSFHSS
. ..:: . . :. ..::.
CCDS48 LGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
390 400 410
>>CCDS2409.1 CXCR1 gene_id:3577|Hs108|chr2 (350 aa)
initn: 673 init1: 391 opt: 751 Z-score: 686.1 bits: 135.5 E(32554): 6.7e-32
Smith-Waterman score: 751; 37.6% identity (68.8% similar) in 330 aa overlap (2-323:3-327)
10 20 30 40 50
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVG
.: : . . . :.: : .: : ::. : . ..:: . :...:: ...:
CCDS24 MSNITDPQMWDFDDLNFTG-MPPADED--YSPCMLE-TETLNKYVVIIAYALVFLLSLLG
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 NGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVI
:.::.::. :.. ::.:: : :.:..:::::..:::.::.. : .: ::.::::.: ..
CCDS24 NSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 YTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFA
::.::..:.:: ::.:::::::::: . .. :. : : .: : .. :..: :.:
CCDS24 KEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLV-KFVCLGCWGLSMNLSLPFFLFR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 NVSEADDRY-ICDRFYPNDL--WVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGH
.. . .. .: . :: : .:... :.:.: .:.: :: . . : ...
CCDS24 QAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMG
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 QKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAF
::..:... ..: :. ::::: . . :... ..:...:: .:.. . .. :: :.:
CCDS24 QKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGF
240 250 260 270 280 290
300 310 320 330 340 350
pF1KE0 FHCCLNPILYAFLGAKF-----KTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESS
.: :::::.:::.: .: : :.:.:.:
CCDS24 LHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL
300 310 320 330 340 350
pF1KE0 SFHSS
>>CCDS77026.1 CCR7 gene_id:1236|Hs108|chr17 (372 aa)
initn: 620 init1: 424 opt: 749 Z-score: 684.0 bits: 135.2 E(32554): 8.8e-32
Smith-Waterman score: 749; 33.5% identity (71.0% similar) in 355 aa overlap (7-355:17-371)
10 20 30 40 50
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYS
: : ..:.: . . :: .. : ... ::. ::: .::
CCDS77 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWFLPIMYS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 IIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGN
:: ..:..:::::.:.. : :.:..::: : :.:.:::.::..:::::: .:. .: ::
CCDS77 IICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWVFGV
70 80 90 100 110 120
120 130 140 150 160
pF1KE0 FLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRK--LLAEKVVYVGVWIPA
.:: . .:: ....:..:.: ::.:::.:::.:....: : :: :. ::.:: :
CCDS77 HFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIWILA
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 LLLTIPDFIFANV--SEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCII
.:.::....... : ... . :. . . ...: ....:...: ... :: .:
CCDS77 TVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMSFCYLVI
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 ISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHK
: : .... .. ::.:. . ....:.. ::: . .. ..: .. ::. . ..
CCDS77 IRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQLNI
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE0 WISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSS--LKILSKGKRGGHSSV
..: .:: .::.::.::::.:.::... . . ... :. :. :. .. .::.
CCDS77 AYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRHIRRSSM
310 320 330 340 350 360
350
pF1KE0 STESESSSFHSS
:.:.:... :
CCDS77 SVEAETTTTFSP
370
>>CCDS11369.1 CCR7 gene_id:1236|Hs108|chr17 (378 aa)
initn: 620 init1: 424 opt: 749 Z-score: 684.0 bits: 135.2 E(32554): 8.9e-32
Smith-Waterman score: 749; 33.5% identity (71.0% similar) in 355 aa overlap (7-355:23-377)
10 20 30 40
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIF
: : ..:.: . . :: .. : ... ::. :
CCDS11 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 LPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVA
:: .:::: ..:..:::::.:.. : :.:..::: : :.:.:::.::..:::::: .:.
CCDS11 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 NWYFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRK--LLAEKVVYV
.: :: .:: . .:: ....:..:.: ::.:::.:::.:....: : :: :. :
CCDS11 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 GVWIPALLLTIPDFIFANV--SEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVIL
:.:: : .:.::....... : ... . :. . . ...: ....:...: ...
CCDS11 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 SCYCIIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEF
:: .:: : .... .. ::.:. . ....:.. ::: . .. ..: .. ::.
CCDS11 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL
250 260 270 280 290 300
290 300 310 320 330
pF1KE0 ENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSS--LKILSKGKR
. .. ..: .:: .::.::.::::.:.::... . . ... :. :. :. ..
CCDS11 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH
310 320 330 340 350 360
340 350
pF1KE0 GGHSSVSTESESSSFHSS
.::.:.:.:... :
CCDS11 IRRSSMSVEAETTTTFSP
370
>>CCDS2732.1 CCR9 gene_id:10803|Hs108|chr3 (369 aa)
initn: 717 init1: 375 opt: 740 Z-score: 676.1 bits: 133.7 E(32554): 2.4e-31
Smith-Waterman score: 740; 34.5% identity (68.1% similar) in 354 aa overlap (4-346:9-357)
10 20 30 40 50
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSG--DYDSMKEPCFREENAN---FNKIFLPTIYS
:.: . .:.: : :. :: ... : :. : : . ::: .:
CCDS27 MTPTDFTSPIPNM----ADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYW
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 IIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGN
..:..: .::.:::::. : ....::: . :.:..:::::..::::::. :. .: : .
CCDS27 LVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQT
60 70 80 90 100 110
120 130 140 150 160
pF1KE0 FLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHA--TNSQRPRKLLAEKVVYVGVWIPA
:.::.:. .: .:.:: ::.. ::.:::.::..: ... : ..:: :.: .:. :
CCDS27 FMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLA
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 LLLTIPDFIFANVSEADDRYICDRFYPND----LWVVVFQFQHIMVGLILPGIVILSCYC
: ::........: . :: ::.: : .:. .. ...:..:: .:. ::
CCDS27 AALCIPEILYSQIKEESGIAICTMVYPSDESTKLKSAVLTLK-VILGFFLPFVVMACCYT
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 IIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTV
::: : ..: .:.::::.:. .. .: .:: . .... .. ..: ...
CCDS27 IIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNI
240 250 260 270 280 290
290 300 310 320 330 340
pF1KE0 HKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSV
...:...:::: ::::.::.:.: .:. . ..: ... :. . .: .: : ..
CCDS27 DICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQWVSFTRREGSLKL
300 310 320 330 340 350
350
pF1KE0 STESESSSFHSS
:.
CCDS27 SSMLLETTSGALSL
360
>>CCDS2408.1 CXCR2 gene_id:3579|Hs108|chr2 (360 aa)
initn: 650 init1: 406 opt: 738 Z-score: 674.5 bits: 133.3 E(32554): 3e-31
Smith-Waterman score: 738; 37.3% identity (70.0% similar) in 327 aa overlap (31-345:38-359)
10 20 30 40 50 60
pF1KE0 MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGN
:: . :. ..:: :. ::...:: ...::
CCDS24 SDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPC-EPESLEINKYFVVIIYALVFLLSLLGN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 GLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIY
.::.::. :.. ::.:: : :.:..:::::..:::.::.. : .: ::.::::.: ..
CCDS24 SLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLK
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 TVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFA-
::.::..:.:: ::.:::::::::: . .. :. : . ...: .:::..: ..:
CCDS24 EVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLV-KFICLSIWGLSLLLALPVLLFRR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 NVSEADDRYICDRFYPNDL--WVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQ
.: .. : . . :. : ..... :.:.: ...: :: . . : ... :
CCDS24 TVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFKAHMGQ
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 KRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFF
:..:... ..: :. ::::: . . :... ..:.. :: .: . . .. :: :...
CCDS24 KHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATEILGIL
250 260 270 280 290 300
300 310 320 330 340
pF1KE0 HCCLNPILYAFLGAKF-----KTSAQHALTSVSRGSSLKILSK----GKRGGHSSVSTES
: ::::..:::.: :: : : :.: .:. .:: :. :. .::.:..
CCDS24 HSCLNPLIYAFIGQKFRHGLLKILAIHGL--ISK-DSLPKDSRPSFVGSSSGHTSTTL
310 320 330 340 350 360
350
pF1KE0 ESSSFHSS
356 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 03:12:30 2016 done: Sat Nov 5 03:12:31 2016
Total Scan time: 2.530 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]