Result of FASTA (ccds) for
pF1KE0705
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0705, 295 aa
1>>>pF1KE0705 295 - 295 aa - 295 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1762+/-0.000983; mu= 7.8330+/- 0.059
mean_var=152.0092+/-31.438, 0's: 0 Z-trim(110.7): 97 B-trim: 727 in 1/51
Lambda= 0.104025
statistics sampled from 11713 (11816) to 11713 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.363), width: 16
Scan time: 2.510
The best scores are: opt bits E(32554)
CCDS43059.1 DAZL gene_id:1618|Hs108|chr3 ( 295) 2013 313.5 1.2e-85
CCDS54556.1 DAZL gene_id:1618|Hs108|chr3 ( 315) 2006 312.5 2.6e-85
CCDS65375.1 DAZ2 gene_id:57055|Hs108|chrY ( 366) 1077 173.1 2.7e-43
CCDS55557.1 DAZ4 gene_id:57135|Hs108|chrY ( 390) 1077 173.1 2.8e-43
CCDS35489.1 DAZ3 gene_id:57054|Hs108|chrY ( 438) 1077 173.2 3.1e-43
CCDS48210.1 DAZ2 gene_id:57055|Hs108|chrY ( 534) 1077 173.3 3.6e-43
CCDS35485.1 DAZ2 gene_id:57055|Hs108|chrY ( 558) 1077 173.3 3.7e-43
CCDS48209.1 DAZ1 gene_id:1617|Hs108|chrY ( 744) 1070 172.3 9.5e-43
CCDS2325.1 BOLL gene_id:66037|Hs108|chr2 ( 283) 400 71.4 8.6e-13
CCDS2324.1 BOLL gene_id:66037|Hs108|chr2 ( 295) 400 71.4 8.9e-13
>>CCDS43059.1 DAZL gene_id:1618|Hs108|chr3 (295 aa)
initn: 2013 init1: 2013 opt: 2013 Z-score: 1651.2 bits: 313.5 E(32554): 1.2e-85
Smith-Waterman score: 2013; 100.0% identity (100.0% similar) in 295 aa overlap (1-295:1-295)
10 20 30 40 50 60
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPPSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 GYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPPSG
190 200 210 220 230 240
250 260 270 280 290
pF1KE0 NGPQKKSVDRSIQTVVSCLFNPENRLRNSVVTQDDYFKDKRVHHFRRSRAMLKSV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NGPQKKSVDRSIQTVVSCLFNPENRLRNSVVTQDDYFKDKRVHHFRRSRAMLKSV
250 260 270 280 290
>>CCDS54556.1 DAZL gene_id:1618|Hs108|chr3 (315 aa)
initn: 2006 init1: 2006 opt: 2006 Z-score: 1645.1 bits: 312.5 E(32554): 2.6e-85
Smith-Waterman score: 2006; 100.0% identity (100.0% similar) in 294 aa overlap (2-295:22-315)
10 20 30 40
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPN
:::::::::::::::::::::::::::::::::::::::
CCDS54 MAAPSCGGDRKARLTPSLPHESTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPN
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNP
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 ITQYVQAYPTYPNSPVQVITGYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ITQYVQAYPTYPNSPVQVITGYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVD
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 PGAEVVPNECSVHEATPPSGNGPQKKSVDRSIQTVVSCLFNPENRLRNSVVTQDDYFKDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 PGAEVVPNECSVHEATPPSGNGPQKKSVDRSIQTVVSCLFNPENRLRNSVVTQDDYFKDK
250 260 270 280 290 300
290
pF1KE0 RVHHFRRSRAMLKSV
:::::::::::::::
CCDS54 RVHHFRRSRAMLKSV
310
>>CCDS65375.1 DAZ2 gene_id:57055|Hs108|chrY (366 aa)
initn: 1061 init1: 1061 opt: 1077 Z-score: 890.7 bits: 173.1 E(32554): 2.7e-43
Smith-Waterman score: 1077; 82.7% identity (90.8% similar) in 196 aa overlap (1-196:1-196)
10 20 30 40 50 60
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF
::.::::::::::::::::::::::.:::..::::::.::::::::::.::::::: : :
CCDS65 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC
.::::::::::::.::::::::::::: ::::::::: :::.:::::::::::::::.::
CCDS65 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT
: :::::::: : :::::::::: :::::::.:: : ::.::.:::: .::.:: ::::
CCDS65 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPPSG
: :: ::::: : .:
CCDS65 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAF
190 200 210 220 230 240
>>CCDS55557.1 DAZ4 gene_id:57135|Hs108|chrY (390 aa)
initn: 1061 init1: 1061 opt: 1077 Z-score: 890.4 bits: 173.1 E(32554): 2.8e-43
Smith-Waterman score: 1077; 82.7% identity (90.8% similar) in 196 aa overlap (1-196:1-196)
10 20 30 40 50 60
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF
::.::::::::::::::::::::::.:::..::::::.::::::::::.::::::: : :
CCDS55 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC
.::::::::::::.::::::::::::: ::::::::: :::.:::::::::::::::.::
CCDS55 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT
: :::::::: : :::::::::: :::::::.:: : ::.::.:::: .::.:: ::::
CCDS55 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPPSG
: :: ::::: : .:
CCDS55 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF
190 200 210 220 230 240
>>CCDS35489.1 DAZ3 gene_id:57054|Hs108|chrY (438 aa)
initn: 1061 init1: 1061 opt: 1077 Z-score: 889.7 bits: 173.2 E(32554): 3.1e-43
Smith-Waterman score: 1077; 82.7% identity (90.8% similar) in 196 aa overlap (1-196:1-196)
10 20 30 40 50 60
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF
::.::::::::::::::::::::::.:::..::::::.::::::::::.::::::: : :
CCDS35 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC
.::::::::::::.::::::::::::: ::::::::: :::.:::::::::::::::.::
CCDS35 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT
: :::::::: : :::::::::: :::::::.:: : ::.::.:::: .::.:: ::::
CCDS35 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPPSG
: :: ::::: : .:
CCDS35 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF
190 200 210 220 230 240
>>CCDS48210.1 DAZ2 gene_id:57055|Hs108|chrY (534 aa)
initn: 1061 init1: 1061 opt: 1077 Z-score: 888.5 bits: 173.3 E(32554): 3.6e-43
Smith-Waterman score: 1077; 82.7% identity (90.8% similar) in 196 aa overlap (1-196:1-196)
10 20 30 40 50 60
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF
::.::::::::::::::::::::::.:::..::::::.::::::::::.::::::: : :
CCDS48 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC
.::::::::::::.::::::::::::: ::::::::: :::.:::::::::::::::.::
CCDS48 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT
: :::::::: : :::::::::: :::::::.:: : ::.::.:::: .::.:: ::::
CCDS48 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPPSG
: :: ::::: : .:
CCDS48 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF
190 200 210 220 230 240
>>CCDS35485.1 DAZ2 gene_id:57055|Hs108|chrY (558 aa)
initn: 1061 init1: 1061 opt: 1077 Z-score: 888.3 bits: 173.3 E(32554): 3.7e-43
Smith-Waterman score: 1077; 82.7% identity (90.8% similar) in 196 aa overlap (1-196:1-196)
10 20 30 40 50 60
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF
::.::::::::::::::::::::::.:::..::::::.::::::::::.::::::: : :
CCDS35 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC
.::::::::::::.::::::::::::: ::::::::: :::.:::::::::::::::.::
CCDS35 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVIT
: :::::::: : :::::::::: :::::::.:: : ::.::.:::: .::.:: ::::
CCDS35 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVIT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPPSG
: :: ::::: : .:
CCDS35 GCQLLVYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAF
190 200 210 220 230 240
>>CCDS48209.1 DAZ1 gene_id:1617|Hs108|chrY (744 aa)
initn: 1874 init1: 1054 opt: 1070 Z-score: 880.9 bits: 172.3 E(32554): 9.5e-43
Smith-Waterman score: 1070; 82.6% identity (90.8% similar) in 195 aa overlap (2-196:332-526)
10 20 30
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYI
:.::::::::::::::::::::::.:::..
CCDS48 PQFQNVWRNPNTETYLQPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGWV
310 320 330 340 350 360
40 50 60 70 80 90
pF1KE0 LPEGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDV
::::::.::::::::::.::::::: : :.::::::::::::.::::::::::::: :::
CCDS48 LPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDV
370 380 390 400 410 420
100 110 120 130 140 150
pF1KE0 DVQKIVESQINFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVWTNPNTETY
:::::: :::.:::::::::::::::.::: :::::::: : :::::::::: :::::::
CCDS48 DVQKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETY
430 440 450 460 470 480
160 170 180 190 200 210
pF1KE0 MQPTTTMNPITQYVQAYPTYPNSPVQVITGYQLPVYNYQMPPQWPVGEQRSYVVPPAYSA
.:: : ::.::.:::: .::.:: ::::: :: ::::: : .:
CCDS48 LQPQITPNPVTQHVQAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSAFQVTTGYQLPVY
490 500 510 520 530 540
220 230 240 250 260 270
pF1KE0 VNYHCNEVDPGAEVVPNECSVHEATPPSGNGPQKKSVDRSIQTVVSCLFNPENRLRNSVV
CCDS48 NYQPFPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQPFPAYPSSP
550 560 570 580 590 600
>--
initn: 991 init1: 950 opt: 970 Z-score: 799.8 bits: 157.3 E(32554): 3.1e-38
Smith-Waterman score: 970; 82.6% identity (90.4% similar) in 178 aa overlap (1-176:1-178)
10 20 30 40 50 60
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFF
::.::::::::::::::::::::::.:::..::::::.::::::::::.::::::: : :
CCDS48 MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLKLGPAIRKQNLC
.::::::::::::.::::::::::::: ::::::::: :::.:::::::::::::::.::
CCDS48 GRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLC
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 AYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQ--AYPTYPNSPVQV
: :::::::: : :::::::::: :::::::.:: : ::.::.:: : : ::: .
CCDS48 ARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQSAANPETPNSTISR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 ITGYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGAEVVPNECSVHEATPP
CCDS48 EASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR
190 200 210 220 230 240
>--
initn: 872 init1: 872 opt: 872 Z-score: 720.3 bits: 142.6 E(32554): 8.4e-34
Smith-Waterman score: 872; 85.0% identity (92.8% similar) in 153 aa overlap (14-166:179-331)
10 20 30 40
pF1KE0 MSTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVF
::::::::::::.:::..::::::.:::::
CCDS48 ETYLQPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVF
150 160 170 180 190 200
50 60 70 80 90 100
pF1KE0 VGGIDVRMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINF
:::::.::::::: : :.::::::::::::.::::::::::::: ::::::::: :::.:
CCDS48 VGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHF
210 220 230 240 250 260
110 120 130 140 150 160
pF1KE0 HGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMNPITQ
::::::::::::::.::: :::::::: : :::::::::: :::::::.:: : ::.::
CCDS48 HGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQ
270 280 290 300 310 320
170 180 190 200 210 220
pF1KE0 YVQAYPTYPNSPVQVITGYQLPVYNYQMPPQWPVGEQRSYVVPPAYSAVNYHCNEVDPGA
.::
CCDS48 HVQSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGS
330 340 350 360 370 380
>>CCDS2325.1 BOLL gene_id:66037|Hs108|chr2 (283 aa)
initn: 319 init1: 288 opt: 400 Z-score: 343.1 bits: 71.4 E(32554): 8.6e-13
Smith-Waterman score: 416; 33.6% identity (59.3% similar) in 268 aa overlap (35-285:28-283)
10 20 30 40 50 60
pF1KE0 NPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFFARYG
: ..:: .:::::: . .:...:.::..::
CCDS23 MQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 SVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVES--QINFHGKKLKLGPAIRKQNLCAY
:::::::..::.:::::::::.: .. :.:::.. ..:.. :::..:::::::..
CCDS23 SVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGI-
60 70 80 90 100 110
130 140 150 160 170
pF1KE0 HVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMN-P-ITQYVQAYPTYP--NSPVQV
:: .. : . . .. :: . .. .. : .:. .:. .:::.:
CCDS23 ---PRSSIM--PAAGTMYLTTSTGYPYTYHNGVAYFHTPEVTSVPPPWPSRSVCSSPVMV
120 130 140 150 160 170
180 190 200 210 220
pF1KE0 ITG-YQLPVYNYQ-----MPPQWP--VGEQRSYVVPPAY---SAVNYHCNEVDPGAEVVP
:: :.:.:: .: :: : . . .: : : : :. :. . ::
CCDS23 AQPIYQQPAYHYQATTQYLPGQWQWSVPQPSASSAPFLYLQPSEVIYQPVEIAQDGGCVP
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 NECSVHEATPPSGNGPQKKSVDRSIQTVVSCLFNPENRLRNSVVTQDDYFKDKRVHHFRR
:. :.. : : . :...:.. .. : . : : . .: :.
CCDS23 PPLSLMETSVPE---PYS---DHGVQATYHQVYAPSAITMPAPVMQPEPIKTVWSIHY
240 250 260 270 280
290
pF1KE0 SRAMLKSV
>>CCDS2324.1 BOLL gene_id:66037|Hs108|chr2 (295 aa)
initn: 319 init1: 288 opt: 400 Z-score: 342.9 bits: 71.4 E(32554): 8.9e-13
Smith-Waterman score: 416; 33.6% identity (59.3% similar) in 268 aa overlap (35-285:40-295)
10 20 30 40 50 60
pF1KE0 NPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFFARYG
: ..:: .:::::: . .:...:.::..::
CCDS23 SNQMQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVES--QINFHGKKLKLGPAIRKQNLCAY
:::::::..::.:::::::::.: .. :.:::.. ..:.. :::..:::::::..
CCDS23 SVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGI-
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 HVQPRPLVFNHPPPPQFQNVWTNPNTETYMQPTTTMN-P-ITQYVQAYPTYP--NSPVQV
:: .. : . . .. :: . .. .. : .:. .:. .:::.:
CCDS23 ---PRSSIM--PAAGTMYLTTSTGYPYTYHNGVAYFHTPEVTSVPPPWPSRSVCSSPVMV
130 140 150 160 170 180
180 190 200 210 220
pF1KE0 ITG-YQLPVYNYQ-----MPPQWP--VGEQRSYVVPPAY---SAVNYHCNEVDPGAEVVP
:: :.:.:: .: :: : . . .: : : : :. :. . ::
CCDS23 AQPIYQQPAYHYQATTQYLPGQWQWSVPQPSASSAPFLYLQPSEVIYQPVEIAQDGGCVP
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 NECSVHEATPPSGNGPQKKSVDRSIQTVVSCLFNPENRLRNSVVTQDDYFKDKRVHHFRR
:. :.. : : . :...:.. .. : . : : . .: :.
CCDS23 PPLSLMETSVPE---PYS---DHGVQATYHQVYAPSAITMPAPVMQPEPIKTVWSIHY
250 260 270 280 290
290
pF1KE0 SRAMLKSV
295 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 02:52:34 2016 done: Sat Nov 5 02:52:35 2016
Total Scan time: 2.510 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]