FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0508, 168 aa
  1>>>pF1KE0508 168 - 168 aa - 168 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2338+/-0.000552; mu= 12.9647+/- 0.034
 mean_var=60.7736+/-12.148, 0's: 0 Z-trim(113.0): 5  B-trim: 0 in 0/50
 Lambda= 0.164519
 statistics sampled from 13708 (13712) to 13708 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.786), E-opt: 0.2 (0.421), width:  16
 Scan time:  2.100

The best scores are:                                      opt bits E(32554)
CCDS33652.1 DESI1 gene_id:27351|Hs108|chr22        ( 168) 1130 275.6 9.8e-75


>>CCDS33652.1 DESI1 gene_id:27351|Hs108|chr22             (168 aa)
 initn: 1130 init1: 1130 opt: 1130  Z-score: 1455.2  bits: 275.6 E(32554): 9.8e-75
Smith-Waterman score: 1130; 100.0% identity (100.0% similar) in 168 aa overlap (1-168:1-168)

               10        20        30        40        50        60
pF1KE0 MEPPNLYPVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSGGISSCPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MEPPNLYPVKLYVYDLSKGLARRLSPIMLGKQLEGIWHTSIVVHKDEFFFGSGGISSCPP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GGTLLGPPDSVVDVGSTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GGTLLGPPDSVVDVGSTEVTEEIFLEYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLT
               70        80        90       100       110       120

              130       140       150       160        
pF1KE0 GRKIPSYITDLPSEVLSTPFGQALRPLLDSIQIQPPGGSSVGRPNGQS
       ::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GRKIPSYITDLPSEVLSTPFGQALRPLLDSIQIQPPGGSSVGRPNGQS
              130       140       150       160        




168 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 03:36:47 2016 done: Thu Nov  3 03:36:47 2016
 Total Scan time:  2.100 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]