Result of FASTA (ccds) for
pF1KE0473
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0473, 197 aa
1>>>pF1KE0473 197 - 197 aa - 197 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7743+/-0.000946; mu= 0.6579+/- 0.058
mean_var=240.3979+/-47.944, 0's: 0 Z-trim(114.4): 34 B-trim: 10 in 1/51
Lambda= 0.082720
statistics sampled from 14948 (14981) to 14948 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.773), E-opt: 0.2 (0.46), width: 16
Scan time: 1.460
The best scores are: opt bits E(32554)
CCDS11510.1 MYL4 gene_id:4635|Hs108|chr17 ( 197) 1315 168.5 2.4e-42
CCDS2746.1 MYL3 gene_id:4634|Hs108|chr3 ( 195) 1056 137.6 4.7e-33
CCDS2390.1 MYL1 gene_id:4632|Hs108|chr2 ( 194) 905 119.6 1.3e-27
CCDS8905.1 MYL6B gene_id:140465|Hs108|chr12 ( 208) 834 111.1 4.7e-25
CCDS8906.1 MYL6 gene_id:4637|Hs108|chr12 ( 151) 790 105.8 1.4e-23
CCDS31834.1 MYL6 gene_id:4637|Hs108|chr12 ( 151) 761 102.3 1.6e-22
CCDS2391.1 MYL1 gene_id:4632|Hs108|chr2 ( 150) 740 99.8 8.8e-22
>>CCDS11510.1 MYL4 gene_id:4635|Hs108|chr17 (197 aa)
initn: 1315 init1: 1315 opt: 1315 Z-score: 873.9 bits: 168.5 E(32554): 2.4e-42
Smith-Waterman score: 1315; 100.0% identity (100.0% similar) in 197 aa overlap (1-197:1-197)
10 20 30 40 50 60
pF1KE0 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
130 140 150 160 170 180
190
pF1KE0 ANGCINYEAFVKHIMSG
:::::::::::::::::
CCDS11 ANGCINYEAFVKHIMSG
190
>>CCDS2746.1 MYL3 gene_id:4634|Hs108|chr3 (195 aa)
initn: 987 init1: 987 opt: 1056 Z-score: 706.9 bits: 137.6 E(32554): 4.7e-33
Smith-Waterman score: 1056; 80.6% identity (90.8% similar) in 196 aa overlap (1-196:1-194)
10 20 30 40 50 60
pF1KE0 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
::::::::::. :: :: :::::: : : :: ::: :: ...::.:: .:::::::::
CCDS27 MAPKKPEPKKDDAKAAPKAAPAPAP-P-PEPERPKEVEFDASKIKIEFTPEQIEEFKEAF
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
:::::: :::::::::::::::::::::.::::::::::. ::.:.::.:::::::.:
CCDS27 MLFDRTPKCEMKITYGQCGDVLRALGQNPTQAEVLRVLGKPRQEELNTKMMDFETFLPML
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
::::.::. ::::::::::::::::.::::::::::::::::::..:: :::.:.:::::
CCDS27 QHISKNKDTGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGERLTEDEVEKLMAGQED
120 130 140 150 160 170
190
pF1KE0 ANGCINYEAFVKHIMSG
.:::::::::::::::
CCDS27 SNGCINYEAFVKHIMSS
180 190
>>CCDS2390.1 MYL1 gene_id:4632|Hs108|chr2 (194 aa)
initn: 721 init1: 721 opt: 905 Z-score: 609.5 bits: 119.6 E(32554): 1.3e-27
Smith-Waterman score: 905; 71.9% identity (85.2% similar) in 196 aa overlap (1-196:1-193)
10 20 30 40 50 60
pF1KE0 MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAF
::::: . :: .: : :::::::::::::: ::: .: ...::.:. .: .::::::
CCDS23 MAPKK-DVKKPVAAAAAAPAPAPAPAPAPAPAKPKEEKIDLSAIKIEFSKEQQDEFKEAF
10 20 30 40 50
70 80 90 100 110 120
pF1KE0 SLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPIL
:::: ::. ::: .: :::::::: ::::::: .:::.:. ::.:.: ..:: :::..
CCDS23 LLFDR--TGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE0 QHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQED
: :: ::.:.:::::::::::::::.:::::::::::::::::::: : ::: :.:::::
CCDS23 QAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQED
120 130 140 150 160 170
190
pF1KE0 ANGCINYEAFVKHIMSG
.:::::::::::::::
CCDS23 SNGCINYEAFVKHIMSI
180 190
>>CCDS8905.1 MYL6B gene_id:140465|Hs108|chr12 (208 aa)
initn: 982 init1: 649 opt: 834 Z-score: 563.3 bits: 111.1 E(32554): 4.7e-25
Smith-Waterman score: 834; 65.8% identity (83.4% similar) in 199 aa overlap (3-196:12-207)
10 20 30 40
pF1KE0 MAPKKPEPKKEAAKPAPAPAPAPAPAPA-PA-PEAPK---EPAFDPKSVKI
: : .: ::::: : :: :: . : :: :.::. :: : ..: :
CCDS89 MPPKKDVPVKKPAGPSISKPAAKPAAAGAP-PAKTKAEPAVPQAPQKTQEPPVDLSKVVI
10 20 30 40 50
50 60 70 80 90 100
pF1KE0 DFTADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEM
.:. ::.::::::: ::::. :. :: :.:::::.:::::::::::::.:::.:: .:.
CCDS89 EFNKDQLEEFKEAFELFDRV--GDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDEL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 NVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKM
. . .:::::::.:: ...:. ::::::..::.::::::.:: ::::::::::.::::::
CCDS89 KSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKM
120 130 140 150 160 170
170 180 190
pF1KE0 TEAEVEQLLAGQEDANGCINYEAFVKHIMSG
:: ::: .:::.::.:::::::::.:::.:
CCDS89 TEEEVETVLAGHEDSNGCINYEAFLKHILSV
180 190 200
>>CCDS8906.1 MYL6 gene_id:4637|Hs108|chr12 (151 aa)
initn: 704 init1: 704 opt: 790 Z-score: 536.8 bits: 105.8 E(32554): 1.4e-23
Smith-Waterman score: 790; 77.5% identity (92.7% similar) in 151 aa overlap (47-197:3-151)
20 30 40 50 60 70
pF1KE0 PAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYG
::: :: ::::::.::::: :. :: :.
CCDS89 MCDFTEDQTAEFKEAFQLFDRT--GDGKILYS
10 20 30
80 90 100 110 120 130
pF1KE0 QCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFV
:::::.:::::::::::::.:::.:: .:::::.:::: :::.:: ...::.::::::.:
CCDS89 QCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFEHFLPMLQTVAKNKDQGTYEDYV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 EGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIMS
:::::::::.::::::::.::::.:::::::: :::.:.::.::.::::::::::.::.:
CCDS89 EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEMLVAGHEDSNGCINYEAFVRHILS
100 110 120 130 140 150
pF1KE0 G
:
CCDS89 G
>>CCDS31834.1 MYL6 gene_id:4637|Hs108|chr12 (151 aa)
initn: 832 init1: 675 opt: 761 Z-score: 518.1 bits: 102.3 E(32554): 1.6e-22
Smith-Waterman score: 761; 74.2% identity (91.4% similar) in 151 aa overlap (47-197:3-151)
20 30 40 50 60 70
pF1KE0 PAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITYG
::: :: ::::::.::::: :. :: :.
CCDS31 MCDFTEDQTAEFKEAFQLFDRT--GDGKILYS
10 20 30
80 90 100 110 120 130
pF1KE0 QCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFV
:::::.:::::::::::::.:::.:: .:::::.:::: :::.:: ...::.::::::.:
CCDS31 QCGDVMRALGQNPTNAEVLKVLGNPKSDEMNVKVLDFEHFLPMLQTVAKNKDQGTYEDYV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 EGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIMS
:::::::::.::::::::.::::.:::::::: :::.:.::.::.::::::: .:. ...
CCDS31 EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEMLVAGHEDSNGCINYEELVRMVLN
100 110 120 130 140 150
pF1KE0 G
:
CCDS31 G
>>CCDS2391.1 MYL1 gene_id:4632|Hs108|chr2 (150 aa)
initn: 654 init1: 654 opt: 740 Z-score: 504.5 bits: 99.8 E(32554): 8.8e-22
Smith-Waterman score: 740; 76.2% identity (88.7% similar) in 151 aa overlap (46-196:1-149)
20 30 40 50 60 70
pF1KE0 APAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGEMKITY
..:.:::: :::::: :::: ::. :::
CCDS23 MSFSADQIAEFKEAFLLFDR--TGDSKITL
10 20
80 90 100 110 120 130
pF1KE0 GQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDF
.: :::::::: ::::::: .:::.:. ::.:.: ..:: :::..: :: ::.:.:::::
CCDS23 SQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMMQAISNNKDQATYEDF
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE0 VEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIM
::::::::::.:::::::::::::::::::: : ::: :.:::::.::::::::::::::
CCDS23 VEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMAGQEDSNGCINYEAFVKHIM
90 100 110 120 130 140
pF1KE0 SG
:
CCDS23 SI
150
197 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 06:01:43 2016 done: Thu Nov 3 06:01:43 2016
Total Scan time: 1.460 Total Display time: -0.030
Function used was FASTA [36.3.4 Apr, 2011]