Result of FASTA (ccds) for
pF1KE0427
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0427, 178 aa
1>>>pF1KE0427 178 - 178 aa - 178 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1081+/-0.000719; mu= 13.1373+/- 0.043
mean_var=55.0461+/-11.052, 0's: 0 Z-trim(108.0): 24 B-trim: 0 in 0/49
Lambda= 0.172867
statistics sampled from 9918 (9934) to 9918 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.702), E-opt: 0.2 (0.305), width: 16
Scan time: 1.900
The best scores are: opt bits E(32554)
CCDS13141.1 NAA20 gene_id:51126|Hs108|chr20 ( 178) 1170 299.4 7.6e-82
CCDS42854.1 NAA20 gene_id:51126|Hs108|chr20 ( 166) 1056 271.0 2.6e-73
CCDS13142.1 NAA20 gene_id:51126|Hs108|chr20 ( 111) 668 174.1 2.4e-44
CCDS47084.1 NAA11 gene_id:84779|Hs108|chr4 ( 229) 263 73.3 1.2e-13
CCDS14737.1 NAA10 gene_id:8260|Hs108|chrX ( 235) 255 71.3 4.8e-13
>>CCDS13141.1 NAA20 gene_id:51126|Hs108|chr20 (178 aa)
initn: 1170 init1: 1170 opt: 1170 Z-score: 1582.8 bits: 299.4 E(32554): 7.6e-82
Smith-Waterman score: 1170; 98.9% identity (98.9% similar) in 178 aa overlap (1-178:1-178)
10 20 30 40 50 60
pF1KE0 MTTPRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAVAPGGELMGYIMGK
::: :::::::::::::::::::::::::::::::::::::::::: :::::::::::::
CCDS13 MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERKGGFFVDLFVRVSNQVAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERKGGFFVDLFVRVSNQVAV
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 NMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE
130 140 150 160 170
>>CCDS42854.1 NAA20 gene_id:51126|Hs108|chr20 (166 aa)
initn: 1056 init1: 1056 opt: 1056 Z-score: 1429.7 bits: 271.0 E(32554): 2.6e-73
Smith-Waterman score: 1056; 99.4% identity (99.4% similar) in 160 aa overlap (19-178:7-166)
10 20 30 40 50 60
pF1KE0 MTTPRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAVAPGGELMGYIMGK
:::::::::::::::::::::::::::: :::::::::::::
CCDS42 MLSQSCNLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK
10 20 30 40
70 80 90 100 110 120
pF1KE0 AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERKGGFFVDLFVRVSNQVAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERKGGFFVDLFVRVSNQVAV
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 NMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE
110 120 130 140 150 160
>>CCDS13142.1 NAA20 gene_id:51126|Hs108|chr20 (111 aa)
initn: 668 init1: 668 opt: 668 Z-score: 909.5 bits: 174.1 E(32554): 2.4e-44
Smith-Waterman score: 668; 98.0% identity (98.0% similar) in 102 aa overlap (1-102:1-102)
10 20 30 40 50 60
pF1KE0 MTTPRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAVAPGGELMGYIMGK
::: :::::::::::::::::::::::::::::::::::::::::: :::::::::::::
CCDS13 MTTLRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAEAPGGELMGYIMGK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERKGGFFVDLFVRVSNQVAV
::::::::::::::::::::::::::::::::::::::::::
CCDS13 AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEEISERYEESTFQGY
70 80 90 100 110
130 140 150 160 170
pF1KE0 NMYKQLGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE
>>CCDS47084.1 NAA11 gene_id:84779|Hs108|chr4 (229 aa)
initn: 239 init1: 121 opt: 263 Z-score: 358.6 bits: 73.3 E(32554): 1.2e-13
Smith-Waterman score: 263; 35.1% identity (64.9% similar) in 151 aa overlap (10-158:9-153)
10 20 30 40 50 60
pF1KE0 MTTPRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAVAPGGELMGYIMGK
:::. ... :: : :.: . .:: . ::. .: :...::...:
CCDS47 MNIRNAQPDDLMNMQHCNLLCLPENYQMKYYLYHGLSWPQLSYIAEDEDGKIVGYVLAK
10 20 30 40 50
70 80 90 100 110
pF1KE0 AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEE-ISERKGGFFVDLFVRVSNQVA
: . :::.:.:.: :::::: :::. . . : .. .:.: :: ::. :
CCDS47 MEEE-PDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRPA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 VNMYKQ-LGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE
...:.. :.... .. .::. .:: ::: :.. ::.
CCDS47 LHLYSNTLNFQISEVEPKYYA--DGE---DAYAMKRDLSQMADELRRQMDLKKGGYVVLG
120 130 140 150 160 170
CCDS47 SRENQETQGSTLSDSEEACQQKNPATEESGSDSKEPKESVESTNVQDSSESSDSTS
180 190 200 210 220
>>CCDS14737.1 NAA10 gene_id:8260|Hs108|chrX (235 aa)
initn: 227 init1: 112 opt: 255 Z-score: 347.7 bits: 71.3 E(32554): 4.8e-13
Smith-Waterman score: 255; 33.1% identity (66.9% similar) in 151 aa overlap (10-158:9-153)
10 20 30 40 50 60
pF1KE0 MTTPRAFTCDDLFRFNNINLDPLTETYGIPFYLQYLAHWPEYFIVAVAPGGELMGYIMGK
.::. ... :: : :.: . .:. . ::. .: .:...::...:
CCDS14 MNIRNARPEDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDENGKIVGYVLAK
10 20 30 40 50
70 80 90 100 110
pF1KE0 AEGSVAREEWHGHVTALSVAPEFRRLGLAAKLMELLEE-ISERKGGFFVDLFVRVSNQVA
: . . :::.:.:.: :::::: :::. . . : .. .:.: :: ::..:
CCDS14 MEED-PDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 VNMYKQ-LGYSVYRTVIEYYSASNGEPDEDAYDMRKALSRDTEKKSIIPLPHPVRPEDIE
...:.. :.... .. .::. .:: ::: :.. :..
CCDS14 LHLYSNTLNFQISEVEPKYYA--DGE---DAYAMKRDLTQMADELRRHLELKEKGRHVVL
120 130 140 150 160 170
CCDS14 GAIENKVESKGNSPPSSGEACREEKGLAAEDSGGDSKDLSEVSETTESTDVKDSSEASDS
180 190 200 210 220 230
178 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:23:47 2016 done: Thu Nov 3 10:23:47 2016
Total Scan time: 1.900 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]