Result of FASTA (ccds) for
pF1KE0420
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0420, 206 aa
1>>>pF1KE0420 206 - 206 aa - 206 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2385+/-0.000772; mu= 13.6679+/- 0.047
mean_var=55.7199+/-11.270, 0's: 0 Z-trim(106.9): 22 B-trim: 178 in 1/47
Lambda= 0.171818
statistics sampled from 9259 (9273) to 9259 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.285), width: 16
Scan time: 2.090
The best scores are: opt bits E(32554)
CCDS77102.1 NAT9 gene_id:26151|Hs108|chr17 ( 206) 1345 341.1 2.9e-94
CCDS11706.1 NAT9 gene_id:26151|Hs108|chr17 ( 207) 1333 338.1 2.3e-93
CCDS82200.1 NAT9 gene_id:26151|Hs108|chr17 ( 212) 1333 338.1 2.3e-93
CCDS82199.1 NAT9 gene_id:26151|Hs108|chr17 ( 202) 1285 326.2 8.4e-90
CCDS77101.1 NAT9 gene_id:26151|Hs108|chr17 ( 139) 865 222.1 1.3e-58
CCDS77103.1 NAT9 gene_id:26151|Hs108|chr17 ( 140) 853 219.1 1e-57
CCDS77104.1 NAT9 gene_id:26151|Hs108|chr17 ( 135) 845 217.1 4e-57
>>CCDS77102.1 NAT9 gene_id:26151|Hs108|chr17 (206 aa)
initn: 1345 init1: 1345 opt: 1345 Z-score: 1805.9 bits: 341.1 E(32554): 2.9e-94
Smith-Waterman score: 1345; 99.0% identity (99.0% similar) in 206 aa overlap (1-206:1-206)
10 20 30 40 50 60
pF1KE0 MRLNQNTLLLGKKVVLVPYTSEHVPRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MRLNQNTLLLGKKVVLVPYTSEHVPRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQED
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TEAVPAMLSYGVTTLGLTKFEAKIGQGNGPSIRMFQKLHFEQVATSSVFQEVTLRLTVSE
:::: ::::::::::::::::::::::: :::::::::::::::::::::::::::::::
CCDS77 TEAVLAMLSYGVTTLGLTKFEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTLRLTVSE
130 140 150 160 170 180
190 200
pF1KE0 SEHQWLLEQTSHVEEKPYRDGSAEPC
::::::::::::::::::::::::::
CCDS77 SEHQWLLEQTSHVEEKPYRDGSAEPC
190 200
>>CCDS11706.1 NAT9 gene_id:26151|Hs108|chr17 (207 aa)
initn: 1331 init1: 1186 opt: 1333 Z-score: 1789.8 bits: 338.1 E(32554): 2.3e-93
Smith-Waterman score: 1333; 98.6% identity (98.6% similar) in 207 aa overlap (1-206:1-207)
10 20 30 40 50
pF1KE0 MRLNQNTLLLGKKVVLVPYTSEHVP-RYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS11 MRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GTEAVPAMLSYGVTTLGLTKFEAKIGQGNGPSIRMFQKLHFEQVATSSVFQEVTLRLTVS
::::: ::::::::::::::::::::::: ::::::::::::::::::::::::::::::
CCDS11 GTEAVLAMLSYGVTTLGLTKFEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTLRLTVS
130 140 150 160 170 180
180 190 200
pF1KE0 ESEHQWLLEQTSHVEEKPYRDGSAEPC
:::::::::::::::::::::::::::
CCDS11 ESEHQWLLEQTSHVEEKPYRDGSAEPC
190 200
>>CCDS82200.1 NAT9 gene_id:26151|Hs108|chr17 (212 aa)
initn: 1331 init1: 1186 opt: 1333 Z-score: 1789.7 bits: 338.1 E(32554): 2.3e-93
Smith-Waterman score: 1333; 98.6% identity (98.6% similar) in 207 aa overlap (1-206:6-212)
10 20 30 40 50
pF1KE0 MRLNQNTLLLGKKVVLVPYTSEHVP-RYHEWMKSEELQRLTASEPLTLEQEYAMQ
::::::::::::::::::::::::: :::::::::::::::::::::::::::::
CCDS82 MQAATMRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 CSWQEDADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 CSWQEDADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 RGKGLGTEAVPAMLSYGVTTLGLTKFEAKIGQGNGPSIRMFQKLHFEQVATSSVFQEVTL
:::::::::: ::::::::::::::::::::::: :::::::::::::::::::::::::
CCDS82 RGKGLGTEAVLAMLSYGVTTLGLTKFEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTL
130 140 150 160 170 180
180 190 200
pF1KE0 RLTVSESEHQWLLEQTSHVEEKPYRDGSAEPC
::::::::::::::::::::::::::::::::
CCDS82 RLTVSESEHQWLLEQTSHVEEKPYRDGSAEPC
190 200 210
>>CCDS82199.1 NAT9 gene_id:26151|Hs108|chr17 (202 aa)
initn: 857 init1: 712 opt: 1285 Z-score: 1725.7 bits: 326.2 E(32554): 8.4e-90
Smith-Waterman score: 1285; 96.1% identity (96.1% similar) in 207 aa overlap (1-206:1-202)
10 20 30 40 50
pF1KE0 MRLNQNTLLLGKKVVLVPYTSEHVP-RYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS82 MRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GTEAVPAMLSYGVTTLGLTKFEAKIGQGNGPSIRMFQKLHFEQVATSSVFQEVTLRLTVS
::::: :::::: :::::::::::: ::::::::::::::::::::::::::::::
CCDS82 GTEAVLAMLSYG-----LTKFEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTLRLTVS
130 140 150 160 170
180 190 200
pF1KE0 ESEHQWLLEQTSHVEEKPYRDGSAEPC
:::::::::::::::::::::::::::
CCDS82 ESEHQWLLEQTSHVEEKPYRDGSAEPC
180 190 200
>>CCDS77101.1 NAT9 gene_id:26151|Hs108|chr17 (139 aa)
initn: 865 init1: 865 opt: 865 Z-score: 1165.7 bits: 222.1 E(32554): 1.3e-58
Smith-Waterman score: 865; 99.2% identity (99.2% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE0 MRLNQNTLLLGKKVVLVPYTSEHVPRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MRLNQNTLLLGKKVVLVPYTSEHVPRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQED
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGLG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 TEAVPAMLSYGVTTLGLTKFEAKIGQGNGPSIRMFQKLHFEQVATSSVFQEVTLRLTVSE
:::: ::::::
CCDS77 TEAVLAMLSYGGDPQTDSE
130
>>CCDS77103.1 NAT9 gene_id:26151|Hs108|chr17 (140 aa)
initn: 851 init1: 706 opt: 853 Z-score: 1149.5 bits: 219.1 E(32554): 1e-57
Smith-Waterman score: 853; 98.5% identity (98.5% similar) in 132 aa overlap (1-131:1-132)
10 20 30 40 50
pF1KE0 MRLNQNTLLLGKKVVLVPYTSEHVP-RYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS77 MRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GTEAVPAMLSYGVTTLGLTKFEAKIGQGNGPSIRMFQKLHFEQVATSSVFQEVTLRLTVS
::::: ::::::
CCDS77 GTEAVLAMLSYGGDPQTDSE
130 140
>>CCDS77104.1 NAT9 gene_id:26151|Hs108|chr17 (135 aa)
initn: 843 init1: 698 opt: 845 Z-score: 1139.1 bits: 217.1 E(32554): 4e-57
Smith-Waterman score: 845; 98.5% identity (98.5% similar) in 131 aa overlap (1-130:1-131)
10 20 30 40 50
pF1KE0 MRLNQNTLLLGKKVVLVPYTSEHVP-RYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
CCDS77 MRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 DADKCTFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GTEAVPAMLSYGVTTLGLTKFEAKIGQGNGPSIRMFQKLHFEQVATSSVFQEVTLRLTVS
::::: :::::
CCDS77 GTEAVLAMLSYETSL
130
206 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 11:10:36 2016 done: Thu Nov 3 11:10:37 2016
Total Scan time: 2.090 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]