Result of FASTA (omim) for
pF1KE0406
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0406, 341 aa
1>>>pF1KE0406 341 - 341 aa - 341 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2822+/-0.000397; mu= 16.2118+/- 0.025
mean_var=62.1531+/-12.534, 0's: 0 Z-trim(111.5): 24 B-trim: 439 in 2/48
Lambda= 0.162683
statistics sampled from 20131 (20151) to 20131 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.606), E-opt: 0.2 (0.236), width: 16
Scan time: 7.180
The best scores are: opt bits E(85289)
NP_001302465 (OMIM: 179060,614111) pyruvate dehydr ( 341) 2277 543.1 3.2e-154
NP_000916 (OMIM: 179060,614111) pyruvate dehydroge ( 359) 2200 525.1 9.1e-149
NP_001166939 (OMIM: 179060,614111) pyruvate dehydr ( 341) 1434 345.3 1.1e-94
XP_011534328 (OMIM: 248600,248611) PREDICTED: 2-ox ( 322) 629 156.3 8.2e-38
NP_001305904 (OMIM: 248600,248611) 2-oxoisovalerat ( 322) 629 156.3 8.2e-38
NP_000047 (OMIM: 248600,248611) 2-oxoisovalerate d ( 392) 630 156.6 8.2e-38
NP_898871 (OMIM: 248600,248611) 2-oxoisovalerate d ( 392) 630 156.6 8.2e-38
XP_011534325 (OMIM: 248600,248611) PREDICTED: 2-ox ( 359) 561 140.4 5.7e-33
XP_005248813 (OMIM: 248600,248611) PREDICTED: 2-ox ( 360) 560 140.2 6.8e-33
XP_011534326 (OMIM: 248600,248611) PREDICTED: 2-ox ( 353) 559 139.9 7.8e-33
XP_011534327 (OMIM: 248600,248611) PREDICTED: 2-ox ( 350) 557 139.4 1.1e-32
NP_001139406 (OMIM: 300044) transketolase-like pro ( 540) 196 54.8 5e-07
NP_001139405 (OMIM: 300044) transketolase-like pro ( 590) 196 54.8 5.4e-07
NP_036385 (OMIM: 300044) transketolase-like protei ( 596) 196 54.8 5.4e-07
XP_011532357 (OMIM: 606781,617044) PREDICTED: tran ( 457) 147 43.3 0.0013
NP_001055 (OMIM: 606781,617044) transketolase isof ( 623) 147 43.3 0.0016
NP_001128527 (OMIM: 606781,617044) transketolase i ( 623) 147 43.3 0.0016
XP_011532356 (OMIM: 606781,617044) PREDICTED: tran ( 631) 147 43.3 0.0017
NP_001244957 (OMIM: 606781,617044) transketolase i ( 631) 147 43.3 0.0017
>>NP_001302465 (OMIM: 179060,614111) pyruvate dehydrogen (341 aa)
initn: 2277 init1: 2277 opt: 2277 Z-score: 2889.8 bits: 543.1 E(85289): 3.2e-154
Smith-Waterman score: 2277; 100.0% identity (100.0% similar) in 341 aa overlap (1-341:1-341)
10 20 30 40 50 60
pF1KE0 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 DKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 PVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 VLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 EGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFL
250 260 270 280 290 300
310 320 330 340
pF1KE0 DAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
:::::::::::::::::::::::::::::::::::::::::
NP_001 DAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
310 320 330 340
>>NP_000916 (OMIM: 179060,614111) pyruvate dehydrogenase (359 aa)
initn: 2192 init1: 2192 opt: 2200 Z-score: 2791.8 bits: 525.1 E(85289): 9.1e-149
Smith-Waterman score: 2231; 95.0% identity (95.0% similar) in 359 aa overlap (1-341:1-359)
10 20 30 40
pF1KE0 MAAVSGLVRRPLREV------------------TVRDAINQGMDEELERDEKVFLLGEEV
::::::::::::::: :::::::::::::::::::::::::::
NP_000 MAAVSGLVRRPLREVSGLLKRRFHWTAPAALQVTVRDAINQGMDEELERDEKVFLLGEEV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 DQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 EDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 EDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 SHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFG
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE0 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
310 320 330 340 350
>>NP_001166939 (OMIM: 179060,614111) pyruvate dehydrogen (341 aa)
initn: 1419 init1: 1399 opt: 1434 Z-score: 1820.5 bits: 345.3 E(85289): 1.1e-94
Smith-Waterman score: 2059; 90.0% identity (90.0% similar) in 359 aa overlap (1-341:1-341)
10 20 30 40
pF1KE0 MAAVSGLVRRPLREV------------------TVRDAINQGMDEELERDEKVFLLGEEV
::::::::::::::: :::::::::::::::::::::::::::
NP_001 MAAVSGLVRRPLREVSGLLKRRFHWTAPAALQVTVRDAINQGMDEELERDEKVFLLGEEV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 DQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNS
::::::::::::::: :::::::::::::::::::::::::::
NP_001 DQVINSAAKTYYMSG------------------VAAQHSQCFAAWYGHCPGLKVVSPWNS
130 140 150 160
170 180 190 200 210 220
pF1KE0 EDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV
170 180 190 200 210 220
230 240 250 260 270 280
pF1KE0 SHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFG
230 240 250 260 270 280
290 300 310 320 330 340
pF1KE0 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
290 300 310 320 330 340
>>XP_011534328 (OMIM: 248600,248611) PREDICTED: 2-oxoiso (322 aa)
initn: 509 init1: 178 opt: 629 Z-score: 799.8 bits: 156.3 E(85289): 8.2e-38
Smith-Waterman score: 629; 35.2% identity (66.4% similar) in 324 aa overlap (20-340:6-321)
10 20 30 40 50 60
pF1KE0 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYG
......:. : .: . ..::.:: . :... . :: :::
XP_011 MNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYG
10 20 30 40
70 80 90 100 110 120
pF1KE0 DKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQ
:...::. :.:..:...: :..: : :.. .. . :.::..: ::: : :: :
XP_011 KDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLF
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 PV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPV
...:.: : . : ::: :...::::.::: : . .::::. : :.:.::
XP_011 NCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPC
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 VVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLS
. .: ...: . : :. . . ::...:.. ..:. .:.:. . : : .. .: ..
XP_011 IFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQV-HVIREVASMA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE0 KE--GVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAF
:: :: ::::..::: : :..:: ::.::..:. . . : ..:: . ..: :
XP_011 KEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQE-ECF
230 240 250 260 270 280
300 310 320 330 340
pF1KE0 NFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
:.:: :: : :.:.:. :.: ::. :..: .:
XP_011 LNLEAPISRVCGYDTPFPH--IFEPFYIPDKWKCYDALRKMINY
290 300 310 320
>>NP_001305904 (OMIM: 248600,248611) 2-oxoisovalerate de (322 aa)
initn: 509 init1: 178 opt: 629 Z-score: 799.8 bits: 156.3 E(85289): 8.2e-38
Smith-Waterman score: 629; 35.2% identity (66.4% similar) in 324 aa overlap (20-340:6-321)
10 20 30 40 50 60
pF1KE0 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYG
......:. : .: . ..::.:: . :... . :: :::
NP_001 MNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYG
10 20 30 40
70 80 90 100 110 120
pF1KE0 DKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQ
:...::. :.:..:...: :..: : :.. .. . :.::..: ::: : :: :
NP_001 KDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLF
50 60 70 80 90 100
130 140 150 160 170
pF1KE0 PV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPV
...:.: : . : ::: :...::::.::: : . .::::. : :.:.::
NP_001 NCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPC
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 VVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLS
. .: ...: . : :. . . ::...:.. ..:. .:.:. . : : .. .: ..
NP_001 IFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQV-HVIREVASMA
170 180 190 200 210 220
240 250 260 270 280 290
pF1KE0 KE--GVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAF
:: :: ::::..::: : :..:: ::.::..:. . . : ..:: . ..: :
NP_001 KEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQE-ECF
230 240 250 260 270 280
300 310 320 330 340
pF1KE0 NFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
:.:: :: : :.:.:. :.: ::. :..: .:
NP_001 LNLEAPISRVCGYDTPFPH--IFEPFYIPDKWKCYDALRKMINY
290 300 310 320
>>NP_000047 (OMIM: 248600,248611) 2-oxoisovalerate dehyd (392 aa)
initn: 464 init1: 178 opt: 630 Z-score: 799.8 bits: 156.6 E(85289): 8.2e-38
Smith-Waterman score: 630; 34.4% identity (66.8% similar) in 331 aa overlap (13-340:69-391)
10 20 30 40
pF1KE0 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEV
..... .......:. : .: . ..::.:
NP_000 AATVEDAAQRRQVAHFTFQPDPEPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDV
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE0 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
: . :... . :: ::: :...::. :.:..:...: :..: : :.. .. . :.
NP_000 A-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAF
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE0 DQVINSAAKTYYMSGGLQPV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWN
::..: ::: : :: : ...:.: : . : ::: :...::::.::: : .
NP_000 DQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRS
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE0 SEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITV
.::::. : :.:.:: . .: ...: . : :. . . ::...:.. ..:. .:.
NP_000 PFQAKGLLLSCIEDKNPCIFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQEGSDVTL
220 230 240 250 260 270
230 240 250 260 270
pF1KE0 VSHSRPVGHCLEAAAVLSKE--GVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWP
:. . : : .. .: ..:: :: ::::..::: : :..:: ::.::..:. . .
NP_000 VAWGTQV-HVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPL
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE0 QFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTL
: ..:: . ..: : :.:: :: : :.:.:. :.: ::. :..: .
NP_000 TGGFASEISSTVQE-ECFLNLEAPISRVCGYDTPFPH--IFEPFYIPDKWKCYDALRKMI
340 350 360 370 380 390
340
pF1KE0 NI
:
NP_000 NY
>>NP_898871 (OMIM: 248600,248611) 2-oxoisovalerate dehyd (392 aa)
initn: 464 init1: 178 opt: 630 Z-score: 799.8 bits: 156.6 E(85289): 8.2e-38
Smith-Waterman score: 630; 34.4% identity (66.8% similar) in 331 aa overlap (13-340:69-391)
10 20 30 40
pF1KE0 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEV
..... .......:. : .: . ..::.:
NP_898 AATVEDAAQRRQVAHFTFQPDPEPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDV
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE0 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
: . :... . :: ::: :...::. :.:..:...: :..: : :.. .. . :.
NP_898 A-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAF
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE0 DQVINSAAKTYYMSGGLQPV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWN
::..: ::: : :: : ...:.: : . : ::: :...::::.::: : .
NP_898 DQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRS
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE0 SEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITV
.::::. : :.:.:: . .: ...: . : :. . . ::...:.. ..:. .:.
NP_898 PFQAKGLLLSCIEDKNPCIFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQEGSDVTL
220 230 240 250 260 270
230 240 250 260 270
pF1KE0 VSHSRPVGHCLEAAAVLSKE--GVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWP
:. . : : .. .: ..:: :: ::::..::: : :..:: ::.::..:. . .
NP_898 VAWGTQV-HVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPL
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE0 QFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTL
: ..:: . ..: : :.:: :: : :.:.:. :.: ::. :..: .
NP_898 TGGFASEISSTVQE-ECFLNLEAPISRVCGYDTPFPH--IFEPFYIPDKWKCYDALRKMI
340 350 360 370 380 390
340
pF1KE0 NI
:
NP_898 NY
>>XP_011534325 (OMIM: 248600,248611) PREDICTED: 2-oxoiso (359 aa)
initn: 464 init1: 178 opt: 561 Z-score: 712.9 bits: 140.4 E(85289): 5.7e-33
Smith-Waterman score: 561; 33.3% identity (67.3% similar) in 294 aa overlap (13-303:69-357)
10 20 30 40
pF1KE0 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEV
..... .......:. : .: . ..::.:
XP_011 AATVEDAAQRRQVAHFTFQPDPEPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDV
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE0 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
: . :... . :: ::: :...::. :.:..:...: :..: : :.. .. . :.
XP_011 A-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAF
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE0 DQVINSAAKTYYMSGGLQPV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWN
::..: ::: : :: : ...:.: : . : ::: :...::::.::: : .
XP_011 DQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRS
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE0 SEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITV
.::::. : :.:.:: . .: ...: . : :. . . ::...:.. ..:. .:.
XP_011 PFQAKGLLLSCIEDKNPCIFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQEGSDVTL
220 230 240 250 260 270
230 240 250 260 270
pF1KE0 VSHSRPVGHCLEAAAVLSKE--GVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWP
:. . : : .. .: ..:: :: ::::..::: : :..:: ::.::..:. . .
XP_011 VAWGTQV-HVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPL
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE0 QFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTL
: ..:: . .. . . : :
XP_011 TGGFASEISSTVQMSVIQSVCDLPIL
340 350
>>XP_005248813 (OMIM: 248600,248611) PREDICTED: 2-oxoiso (360 aa)
initn: 464 init1: 178 opt: 560 Z-score: 711.6 bits: 140.2 E(85289): 6.8e-33
Smith-Waterman score: 560; 33.9% identity (68.2% similar) in 286 aa overlap (13-295:69-349)
10 20 30 40
pF1KE0 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEV
..... .......:. : .: . ..::.:
XP_005 AATVEDAAQRRQVAHFTFQPDPEPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDV
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE0 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
: . :... . :: ::: :...::. :.:..:...: :..: : :.. .. . :.
XP_005 A-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAF
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE0 DQVINSAAKTYYMSGGLQPV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWN
::..: ::: : :: : ...:.: : . : ::: :...::::.::: : .
XP_005 DQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRS
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE0 SEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITV
.::::. : :.:.:: . .: ...: . : :. . . ::...:.. ..:. .:.
XP_005 PFQAKGLLLSCIEDKNPCIFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQEGSDVTL
220 230 240 250 260 270
230 240 250 260 270
pF1KE0 VSHSRPVGHCLEAAAVLSKE--GVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWP
:. . : : .. .: ..:: :: ::::..::: : :..:: ::.::..:. . .
XP_005 VAWGTQV-HVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPL
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE0 QFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTL
: ..:: . .. :
XP_005 TGGFASEISSTVQIYPHERTSVKFSVN
340 350 360
>>XP_011534326 (OMIM: 248600,248611) PREDICTED: 2-oxoiso (353 aa)
initn: 464 init1: 178 opt: 559 Z-score: 710.4 bits: 139.9 E(85289): 7.8e-33
Smith-Waterman score: 559; 33.8% identity (68.7% similar) in 284 aa overlap (13-293:69-347)
10 20 30 40
pF1KE0 MAAVSGLVRRPLREVTVRDAINQGMDEELERDEKVFLLGEEV
..... .......:. : .: . ..::.:
XP_011 AATVEDAAQRRQVAHFTFQPDPEPREYGQTQKMNLFQSVTSALDNSLAKDPTAVIFGEDV
40 50 60 70 80 90
50 60 70 80 90 100
pF1KE0 AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
: . :... . :: ::: :...::. :.:..:...: :..: : :.. .. . :.
XP_011 A-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAF
100 110 120 130 140 150
110 120 130 140 150 160
pF1KE0 DQVINSAAKTYYMSGGLQPV-PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWN
::..: ::: : :: : ...:.: : . : ::: :...::::.::: : .
XP_011 DQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRS
160 170 180 190 200 210
170 180 190 200 210 220
pF1KE0 SEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITV
.::::. : :.:.:: . .: ...: . : :. . . ::...:.. ..:. .:.
XP_011 PFQAKGLLLSCIEDKNPCIFFEPKILYRAAAE---EVPIEPYNIPLSQAEVIQEGSDVTL
220 230 240 250 260 270
230 240 250 260 270
pF1KE0 VSHSRPVGHCLEAAAVLSKE--GVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWP
:. . : : .. .: ..:: :: ::::..::: : :..:: ::.::..:. . .
XP_011 VAWGTQV-HVIREVASMAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPL
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE0 QFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTL
: ..:: . ...
XP_011 TGGFASEISSTVQQLEDTGD
340 350
341 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 12:09:16 2016 done: Thu Nov 3 12:09:17 2016
Total Scan time: 7.180 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]