Result of FASTA (ccds) for
pF1KE0263
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0263, 132 aa
1>>>pF1KE0263 132 - 132 aa - 132 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3917+/-0.00105; mu= 10.1463+/- 0.063
mean_var=57.3676+/-11.162, 0's: 0 Z-trim(102.3): 26 B-trim: 0 in 0/47
Lambda= 0.169333
statistics sampled from 6879 (6900) to 6879 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.212), width: 16
Scan time: 1.400
The best scores are: opt bits E(32554)
CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 585 151.2 1.8e-37
CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 583 150.7 2.5e-37
CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 511 133.1 4.9e-32
CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 496 129.4 6.6e-31
CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 473 123.8 3.1e-29
CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 463 121.4 1.7e-28
CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 442 116.3 7.2e-27
CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 299 81.3 2e-16
CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 283 77.4 3e-15
CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 278 76.2 6.8e-15
CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 275 75.5 1.6e-14
CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 267 73.5 4.4e-14
CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 240 66.9 4.3e-12
CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 ( 153) 232 64.9 1.9e-11
CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 ( 157) 230 64.5 2.7e-11
CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 229 64.2 2.7e-11
>>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa)
initn: 585 init1: 585 opt: 585 Z-score: 786.3 bits: 151.2 E(32554): 1.8e-37
Smith-Waterman score: 585; 67.4% identity (90.2% similar) in 132 aa overlap (1-132:1-132)
10 20 30 40 50 60
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD
: . :::::::::::::.:::: :::..:.:....:.:::: :: : ..::::::.:..
CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM
:.::::::.::.::::::::.:: .::. ::. .::.: :::::::::.:. :::.::::
CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
70 80 90 100 110 120
130
pF1KE0 NNIVSTRIYEKV
...: :::::::
CCDS62 KGVVCTRIYEKV
130
>>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa)
initn: 602 init1: 567 opt: 583 Z-score: 783.7 bits: 150.7 E(32554): 2.5e-37
Smith-Waterman score: 583; 64.1% identity (91.6% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD
: . :.:::::::::::.:::::.::.::.:..::..::.. :::.: ..::..::.:..
CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM
:.::: ::.::::.:::.:::::::::..: ..::::: :: :::::: :.:.:::: :
CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
70 80 90 100 110 120
130
pF1KE0 NNIVSTRIYEKV
....:::.::.
CCDS62 KGVTSTRVYERA
130
>>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa)
initn: 511 init1: 511 opt: 511 Z-score: 688.6 bits: 133.1 E(32554): 4.9e-32
Smith-Waterman score: 511; 55.7% identity (86.3% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD
::. ::::::::.:.::.:::: :::.::.:..:...:::. : .: ..:..:.:.:..
CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM
:.:::::: ::::::::.::::: .::..:...:.::: :.:::. :...: :...
CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
70 80 90 100 110 120
130
pF1KE0 NNIVSTRIYEKV
.. : :: :::
CCDS34 GTAVCTRTYEKEA
130
>>CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 (140 aa)
initn: 496 init1: 496 opt: 496 Z-score: 668.4 bits: 129.4 E(32554): 6.6e-31
Smith-Waterman score: 496; 57.6% identity (83.3% similar) in 132 aa overlap (1-132:1-132)
10 20 30 40 50 60
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD
:.. . :::: .: :: ::::::::.. :.:... :.:::::::.:: ..::.:.: :..
CCDS47 MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM
..:::::::::.: : ..:.:: .::.. :.:.:: : :::::: ::.:: ::::: .
CCDS47 NEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVESTV
70 80 90 100 110 120
130
pF1KE0 NNIVSTRIYEKV
:... :: ::::
CCDS47 NSVICTRTYEKVSSNSVSNS
130 140
>>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa)
initn: 473 init1: 473 opt: 473 Z-score: 638.4 bits: 123.8 E(32554): 3.1e-29
Smith-Waterman score: 473; 53.4% identity (86.3% similar) in 131 aa overlap (1-131:1-131)
10 20 30 40 50 60
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD
::: : .::::..:.::..::: :::.::.:......:::: :: .: ..::: :.:..
CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM
:.:::.:::::::::::.:. ::...:.. ...:.::: ::::.. :.: : :::. .
CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTLTF
70 80 90 100 110 120
130
pF1KE0 NNIVSTRIYEKV
...:..: :::
CCDS51 GDVVAVRHYEKA
130
>>CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 (135 aa)
initn: 463 init1: 463 opt: 463 Z-score: 625.1 bits: 121.4 E(32554): 1.7e-28
Smith-Waterman score: 463; 51.1% identity (84.0% similar) in 131 aa overlap (2-132:4-134)
10 20 30 40 50
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSF
:. . : :.::.:..:..:::::::..: :.:....:: :. ::: .::.:::..
CCDS62 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 QDTKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVEC
. :..: :::.:.:::::.::.... .. .:.... :.: :::.:: ::. : :.::::
CCDS62 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC
70 80 90 100 110 120
120 130
pF1KE0 KMNNIVSTRIYEKV
:::.. :::::::
CCDS62 VMNNVTCTRIYEKVE
130
>>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa)
initn: 456 init1: 442 opt: 442 Z-score: 595.9 bits: 116.3 E(32554): 7.2e-27
Smith-Waterman score: 442; 56.0% identity (87.9% similar) in 116 aa overlap (1-116:1-116)
10 20 30 40 50 60
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD
::: : .::::..:.::..::: :::.::.:......:::: :: .: ..::: :.:..
CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM
:.:::.:::::::::::.:. ::...:.. ...:.::: ::::.. :.: : :::.
CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVSND
70 80 90 100 110 120
130
pF1KE0 NNIVSTRIYEKV
CCDS83 NSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM
130 140 150 160
>>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa)
initn: 276 init1: 160 opt: 299 Z-score: 408.4 bits: 81.3 E(32554): 2e-16
Smith-Waterman score: 299; 39.7% identity (66.4% similar) in 131 aa overlap (5-129:4-134)
10 20 30 40 50
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMA--GLVKPTVTISVDGKMMTIRTESSF
: ::::. :::::.. .: :::: :..: . :: : : :: .. :.: ..
CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 QDTKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWL----GKETTIKRKIVDEKM
. :.:.::.:: :.: :.:.:: .: : :: . :: . : : .: :.......
CCDS10 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDEL
60 70 80 90 100 110
120 130
pF1KE0 VVECKMNNIVSTRIYEKV
.. ...: ::::
CCDS10 ILTFGADDVVCTRIYVRE
120 130
>>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa)
initn: 242 init1: 141 opt: 283 Z-score: 387.3 bits: 77.4 E(32554): 3e-15
Smith-Waterman score: 283; 37.9% identity (68.2% similar) in 132 aa overlap (5-129:4-135)
10 20 30 40 50
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMA--GLVKPTVTISVDGKMMTIRTESSF
: :.::.. :::::. .: :::: :..: . ::.: :. .: . :.: ..
CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 QDTKISFKLGEEFDETTADNRKVKSTITLEN-GSMIHVQKWL---GKETTIKRKIV-DEK
. :.:.::.::::.: :.:.: :: . :. ..:. :: : : .:. :... : .
CCDS11 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE
60 70 80 90 100 110
120 130
pF1KE0 MVVECKMNNIVSTRIYEKV
... ...: ::.:
CCDS11 LILTMTADDVVCTRVYVRE
120 130
>>CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 (134 aa)
initn: 277 init1: 230 opt: 278 Z-score: 380.9 bits: 76.2 E(32554): 6.8e-15
Smith-Waterman score: 278; 38.6% identity (66.1% similar) in 127 aa overlap (7-131:7-133)
10 20 30 40 50 60
pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD
::: :.::.::: :: ::..::.:..: :.:: .: .: .::.:.::...
CCDS10 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN
10 20 30 40 50 60
70 80 90 100 110
pF1KE0 TKISFKLGEEFDETTA--DNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVEC
..::.:::::: . :::: :: . .: . .:: :. . : .:. .:
CCDS10 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM
70 80 90 100 110 120
120 130
pF1KE0 KMNNIVSTRIYEKV
.. : . ...
CCDS10 FCEGQVCKQTFQRA
130
132 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:32:59 2016 done: Thu Nov 3 18:32:59 2016
Total Scan time: 1.400 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]