Result of FASTA (ccds) for
pF1KE0169
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0169, 193 aa
1>>>pF1KE0169 193 - 193 aa - 193 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6415+/- 0.001; mu= 12.0216+/- 0.060
mean_var=96.7683+/-19.271, 0's: 0 Z-trim(106.7): 98 B-trim: 7 in 1/51
Lambda= 0.130379
statistics sampled from 9059 (9160) to 9059 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.281), width: 16
Scan time: 1.950
The best scores are: opt bits E(32554)
CCDS6292.1 NCALD gene_id:83988|Hs108|chr8 ( 193) 1288 252.3 1.4e-67
CCDS1671.1 HPCAL1 gene_id:3241|Hs108|chr2 ( 193) 1199 235.5 1.5e-62
CCDS370.1 HPCA gene_id:3208|Hs108|chr1 ( 193) 1151 226.5 7.9e-60
CCDS1689.1 VSNL1 gene_id:7447|Hs108|chr2 ( 191) 924 183.8 5.6e-47
CCDS441.1 HPCAL4 gene_id:51440|Hs108|chr1 ( 191) 888 177.0 6.1e-45
CCDS6932.1 NCS1 gene_id:23413|Hs108|chr9 ( 190) 794 159.3 1.3e-39
CCDS78448.1 NCS1 gene_id:23413|Hs108|chr9 ( 172) 707 142.9 1e-34
CCDS11151.1 RCVRN gene_id:5957|Hs108|chr17 ( 200) 675 137.0 7.3e-33
CCDS7524.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 220) 550 113.5 9.4e-26
CCDS7525.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 225) 550 113.5 9.5e-26
CCDS41562.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 252) 550 113.6 1e-25
CCDS7522.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 270) 550 113.6 1.1e-25
CCDS7521.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 285) 550 113.6 1.1e-25
CCDS64313.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 188) 547 112.9 1.2e-25
CCDS4374.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 216) 547 112.9 1.4e-25
CCDS34285.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 225) 547 112.9 1.4e-25
CCDS34286.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 227) 547 113.0 1.4e-25
CCDS47035.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 188) 533 110.2 7.7e-25
CCDS43215.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 216) 533 110.3 8.5e-25
CCDS43217.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 225) 533 110.3 8.8e-25
CCDS3428.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 229) 533 110.3 8.9e-25
CCDS43216.1 KCNIP4 gene_id:80333|Hs108|chr4 ( 250) 533 110.4 9.5e-25
CCDS7523.1 KCNIP2 gene_id:30819|Hs108|chr10 ( 227) 532 110.1 1e-24
CCDS33245.1 KCNIP3 gene_id:30818|Hs108|chr2 ( 230) 530 109.8 1.3e-24
CCDS2013.1 KCNIP3 gene_id:30818|Hs108|chr2 ( 256) 530 109.8 1.4e-24
CCDS4865.1 GUCA1B gene_id:2979|Hs108|chr6 ( 200) 514 106.7 9.6e-24
CCDS4864.1 GUCA1A gene_id:2978|Hs108|chr6 ( 201) 478 99.9 1e-21
CCDS2954.1 GUCA1C gene_id:9626|Hs108|chr3 ( 209) 392 83.8 8e-17
CCDS64312.1 KCNIP1 gene_id:30820|Hs108|chr5 ( 241) 374 80.4 9.3e-16
>>CCDS6292.1 NCALD gene_id:83988|Hs108|chr8 (193 aa)
initn: 1288 init1: 1288 opt: 1288 Z-score: 1326.8 bits: 252.3 E(32554): 1.4e-67
Smith-Waterman score: 1288; 99.5% identity (100.0% similar) in 193 aa overlap (1-193:1-193)
10 20 30 40 50 60
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSMEEFIRGAKSDPSIV
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
CCDS62 MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIV
130 140 150 160 170 180
190
pF1KE0 RLLQCDPSSAGQF
:::::::::::::
CCDS62 RLLQCDPSSAGQF
190
>>CCDS1671.1 HPCAL1 gene_id:3241|Hs108|chr2 (193 aa)
initn: 1199 init1: 1199 opt: 1199 Z-score: 1236.3 bits: 235.5 E(32554): 1.5e-62
Smith-Waterman score: 1199; 90.2% identity (99.0% similar) in 193 aa overlap (1-193:1-193)
10 20 30 40 50 60
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
::::::::::::.::: :.:.::.::.::::::::.:::.:::...::::::.:::::::
CCDS16 MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVDEFKKIYANFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
:::::::::::::.:::::::::::::::::::::::::::::::::::::::::::..:
CCDS16 ASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSMEEFIRGAKSDPSIV
:::::::::::::::::::::::::::::.::::::::: :::::.::::::::::::::
CCDS16 MLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEFIRGAKSDPSIV
130 140 150 160 170 180
190
pF1KE0 RLLQCDPSSAGQF
::::::::::.::
CCDS16 RLLQCDPSSASQF
190
>>CCDS370.1 HPCA gene_id:3208|Hs108|chr1 (193 aa)
initn: 1151 init1: 1151 opt: 1151 Z-score: 1187.5 bits: 226.5 E(32554): 7.9e-60
Smith-Waterman score: 1151; 87.6% identity (96.9% similar) in 193 aa overlap (1-193:1-193)
10 20 30 40 50 60
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
:::::::::::..::: :.:.:.: :.::::::::.:::.: :...::::::.:::::::
CCDS37 MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVDEFKKIYANFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
:::::::::::::.:.:::::::::::::::::::.::::: :::::::::::::::. :
CCDS37 ASKFAEHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLMWAFSMYDLDGNGYISREE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSMEEFIRGAKSDPSIV
::::::::::::::::::::::::::::::::::::::: :::::.::::::::::::::
CCDS37 MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEFIRGAKSDPSIV
130 140 150 160 170 180
190
pF1KE0 RLLQCDPSSAGQF
::::::::::.::
CCDS37 RLLQCDPSSASQF
190
>>CCDS1689.1 VSNL1 gene_id:7447|Hs108|chr2 (191 aa)
initn: 735 init1: 735 opt: 924 Z-score: 956.8 bits: 183.8 E(32554): 5.6e-47
Smith-Waterman score: 924; 69.1% identity (92.0% similar) in 188 aa overlap (1-186:1-188)
10 20 30 40 50 60
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
:::::::: ::::.::..::.:.:::...::::::.:::::.:..:::...: .::::::
CCDS16 MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
:::::.:.::::: :::::::::::: :::.::::..::::.:::.::::::.: :...:
CCDS16 ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 MLEIVQAIYKMVSSV--MKMPEDESTPEKRTEKIFRQMDTNRDGKLSMEEFIRGAKSDPS
::::..::::::..: ::: :: :::.:..::: .:: :.: .....:: ..::::::
CCDS16 MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPS
130 140 150 160 170 180
180 190
pF1KE0 IVRLLQCDPSSAGQF
:: :::::
CCDS16 IVLLLQCDIQK
190
>>CCDS441.1 HPCAL4 gene_id:51440|Hs108|chr1 (191 aa)
initn: 702 init1: 702 opt: 888 Z-score: 920.3 bits: 177.0 E(32554): 6.1e-45
Smith-Waterman score: 888; 66.0% identity (90.4% similar) in 188 aa overlap (1-186:1-188)
10 20 30 40 50 60
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
::: :::: :::..::...:.:.:.:...::::::.::::: :..:::...: .::::::
CCDS44 MGKTNSKLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
:::::.:.::::: :::::::::::: ::::::::..::::.::: ::::::.: :.. :
CCDS44 ASKFAQHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLE
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 MLEIVQAIYKMVSSV--MKMPEDESTPEKRTEKIFRQMDTNRDGKLSMEEFIRGAKSDPS
::::..::::::..: :.: .: ::..:..:::..:: ..: ....::: ..::::::
CCDS44 MLEIIEAIYKMVGTVIMMRMNQDGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPS
130 140 150 160 170 180
180 190
pF1KE0 IVRLLQCDPSSAGQF
:: :::::
CCDS44 IVLLLQCDMQK
190
>>CCDS6932.1 NCS1 gene_id:23413|Hs108|chr9 (190 aa)
initn: 840 init1: 794 opt: 794 Z-score: 824.7 bits: 159.3 E(32554): 1.3e-39
Smith-Waterman score: 794; 60.1% identity (88.0% similar) in 183 aa overlap (1-183:1-183)
10 20 30 40 50 60
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
:::.::::.:::...: ..: :::.:.:.:::::..:::::.:. :.::: .:::.::
CCDS69 MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
.::: :: .:: : :: :.: ::: :::::::: :..::.:::..::::..:::.. :
CCDS69 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSMEEFIRGAKSDPSIV
::.::.:::.::......::.:.:::::...:: .:: : ::::...:: .:.:.:::::
CCDS69 MLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIV
130 140 150 160 170 180
190
pF1KE0 RLLQCDPSSAGQF
. :
CCDS69 QALSLYDGLV
190
>>CCDS78448.1 NCS1 gene_id:23413|Hs108|chr9 (172 aa)
initn: 753 init1: 707 opt: 707 Z-score: 736.9 bits: 142.9 E(32554): 1e-34
Smith-Waterman score: 707; 60.2% identity (87.6% similar) in 161 aa overlap (23-183:5-165)
10 20 30 40 50 60
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGD
::.:.:.:::::..:::::.:. :.::: .:::.::
CCDS78 MATITEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD
10 20 30 40
70 80 90 100 110 120
pF1KE0 ASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
.::: :: .:: : :: :.: ::: :::::::: :..::.:::..::::..:::.. :
CCDS78 PTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 MLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSMEEFIRGAKSDPSIV
::.::.:::.::......::.:.:::::...:: .:: : ::::...:: .:.:.:::::
CCDS78 MLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIV
110 120 130 140 150 160
190
pF1KE0 RLLQCDPSSAGQF
. :
CCDS78 QALSLYDGLV
170
>>CCDS11151.1 RCVRN gene_id:5957|Hs108|chr17 (200 aa)
initn: 608 init1: 469 opt: 675 Z-score: 703.5 bits: 137.0 E(32554): 7.3e-33
Smith-Waterman score: 675; 50.0% identity (82.6% similar) in 190 aa overlap (1-187:1-190)
10 20 30 40 50
pF1KE0 MGKQNS-KLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYG
::...: : :....: .: :.:.:. ::..::.:::.:......:..::..:::
CCDS11 MGNSKSGALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 DASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKA
: . .:.::::.::.: :::.::.:..::: .:. :: .:::.::::.::.:::: :::
CCDS11 DPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKN
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 EMLEIVQAIYKMVS--SVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSMEEFIRGAKSDP
:.::::.::.::.. .: .:.::.:::::.:::.. . : : ::. .:::.:. ..
CCDS11 EVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANK
130 140 150 160 170 180
180 190
pF1KE0 SIVRLLQCDPSSAGQF
:.::.: .:
CCDS11 EILRLIQFEPQKVKEKMKNA
190 200
>>CCDS7524.1 KCNIP2 gene_id:30819|Hs108|chr10 (220 aa)
initn: 620 init1: 550 opt: 550 Z-score: 575.8 bits: 113.5 E(32554): 9.4e-26
Smith-Waterman score: 550; 43.2% identity (79.5% similar) in 176 aa overlap (9-184:39-214)
10 20 30
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDC
::: ...: :.: ::..:.: :.:: .:
CCDS75 SLSDSRDLDGSYDQLTDSVDDEFELSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNEC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 PSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLE
::: .. :.::.::..::: ::.: .: .: .::.: ::...:..:. .::: :: ..
CCDS75 PSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVD
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE0 QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDT
..:.:::..:::. .: :.: :::.:...:: :... : .:....:..:..::
CCDS75 DRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDR
130 140 150 160 170 180
160 170 180 190
pF1KE0 NRDGKLSMEEFIRGAKSDPSIVRLLQCDPSSAGQF
:.:: ...::::.. ..: .:.: .:
CCDS75 NKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>CCDS7525.1 KCNIP2 gene_id:30819|Hs108|chr10 (225 aa)
initn: 604 init1: 550 opt: 550 Z-score: 575.7 bits: 113.5 E(32554): 9.5e-26
Smith-Waterman score: 550; 43.2% identity (79.5% similar) in 176 aa overlap (9-184:44-219)
10 20 30
pF1KE0 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDC
::: ...: :.: ::..:.: :.:: .:
CCDS75 QAARSLYQLVTGSLSPDSVDDEFELSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNEC
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE0 PSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLE
::: .. :.::.::..::: ::.: .: .: .::.: ::...:..:. .::: :: ..
CCDS75 PSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVD
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE0 QKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDT
..:.:::..:::. .: :.: :::.:...:: :... : .:....:..:..::
CCDS75 DRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDR
140 150 160 170 180 190
160 170 180 190
pF1KE0 NRDGKLSMEEFIRGAKSDPSIVRLLQCDPSSAGQF
:.:: ...::::.. ..: .:.: .:
CCDS75 NKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
200 210 220
193 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 22:59:28 2016 done: Thu Nov 3 22:59:28 2016
Total Scan time: 1.950 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]