Result of FASTA (ccds) for
pF1KE0167
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0167, 164 aa
1>>>pF1KE0167 164 - 164 aa - 164 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7207+/-0.000543; mu= 16.0569+/- 0.033
mean_var=63.6749+/-12.650, 0's: 0 Z-trim(113.0): 15 B-trim: 0 in 0/55
Lambda= 0.160727
statistics sampled from 13648 (13662) to 13648 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.42), width: 16
Scan time: 1.660
The best scores are: opt bits E(32554)
CCDS43952.1 NUDT11 gene_id:55190|Hs108|chrX ( 164) 1129 269.3 7.6e-73
CCDS35278.1 NUDT10 gene_id:170685|Hs108|chrX ( 164) 1119 267.0 3.8e-72
CCDS9044.1 NUDT4 gene_id:11163|Hs108|chr12 ( 181) 1024 245.0 1.7e-65
CCDS44952.1 NUDT4 gene_id:11163|Hs108|chr12 ( 180) 1005 240.6 3.7e-64
CCDS4791.1 NUDT3 gene_id:11165|Hs108|chr6 ( 172) 818 197.2 4e-51
CCDS73504.1 NUDT4 gene_id:11163|Hs108|chr12 ( 129) 696 168.8 1.1e-42
CCDS76584.1 NUDT4 gene_id:11163|Hs108|chr12 ( 128) 677 164.4 2.2e-41
>>CCDS43952.1 NUDT11 gene_id:55190|Hs108|chrX (164 aa)
initn: 1129 init1: 1129 opt: 1129 Z-score: 1421.3 bits: 269.3 E(32554): 7.6e-73
Smith-Waterman score: 1129; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE0 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWF
70 80 90 100 110 120
130 140 150 160
pF1KE0 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
::::::::::::::::::::::::::::::::::::::::::::
CCDS43 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
130 140 150 160
>>CCDS35278.1 NUDT10 gene_id:170685|Hs108|chrX (164 aa)
initn: 1119 init1: 1119 opt: 1119 Z-score: 1408.8 bits: 267.0 E(32554): 3.8e-72
Smith-Waterman score: 1119; 99.4% identity (99.4% similar) in 164 aa overlap (1-164:1-164)
10 20 30 40 50 60
pF1KE0 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS35 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWF
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
CCDS35 AAVREVYEEAGVKGKLGRLLGVFEQNQDPKHRTYVYVLTVTELLEDWEDSVSIGRKREWF
70 80 90 100 110 120
130 140 150 160
pF1KE0 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
::::::::::::::::::::::::::::::::::::::::::::
CCDS35 KVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
130 140 150 160
>>CCDS9044.1 NUDT4 gene_id:11163|Hs108|chr12 (181 aa)
initn: 1058 init1: 1024 opt: 1024 Z-score: 1289.2 bits: 245.0 E(32554): 1.7e-65
Smith-Waterman score: 1024; 91.4% identity (96.9% similar) in 163 aa overlap (1-163:2-164)
10 20 30 40 50
pF1KE0 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG
:: ::::::::: :::::::::::::::.::::::::::::::.:::::::::::::::
CCDS90 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 GAAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREW
::::::::::::::::::::::.::::::::::::::::::::.::::::::.:::::::
CCDS90 GAAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW
70 80 90 100 110 120
120 130 140 150 160
pF1KE0 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
::::::::::::::::::::::::::: ::.:::: .:: ::..
CCDS90 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV
130 140 150 160 170 180
CCDS90 R
>>CCDS44952.1 NUDT4 gene_id:11163|Hs108|chr12 (180 aa)
initn: 1023 init1: 543 opt: 1005 Z-score: 1265.4 bits: 240.6 E(32554): 3.7e-64
Smith-Waterman score: 1005; 90.8% identity (96.3% similar) in 163 aa overlap (1-163:2-163)
10 20 30 40 50
pF1KE0 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG
:: ::::::::: :::::::::::::::.::::::::::::::.:::::::::::::::
CCDS44 MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 GAAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREW
::::::::::::::::::::::.:: :::::::::::::::::.::::::::.:::::::
CCDS44 GAAVREVYEEAGVKGKLGRLLGIFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREW
70 80 90 100 110
120 130 140 150 160
pF1KE0 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
::::::::::::::::::::::::::: ::.:::: .:: ::..
CCDS44 FKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSV
120 130 140 150 160 170
CCDS44 R
180
>>CCDS4791.1 NUDT3 gene_id:11165|Hs108|chr6 (172 aa)
initn: 821 init1: 477 opt: 818 Z-score: 1031.3 bits: 197.2 E(32554): 4e-51
Smith-Waterman score: 818; 76.7% identity (89.3% similar) in 159 aa overlap (1-159:2-159)
10 20 30 40 50
pF1KE0 MKCKPNQTRTYDPEGFKKRAACLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPG
:: : ::::::: .:.:::::::::::: :.:::::::::.:::::::::::::::::.
CCDS47 MMKLKSNQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 GAAVREVYEEAGVKGKLGRLLGVFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREW
:::::: ::::::: ::::.:.:: ::.:::::::::: :::.::::::::.:::::::
CCDS47 VAAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREW
70 80 90 100 110
120 130 140 150 160
pF1KE0 FKVEDAIKVLQCHKPVHAEYLEKLKLGGSPTNGNSMAPSSPDSDP
::.:::::::: ::::.: :.: :. : : .::. .. ..
CCDS47 FKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSVSAQSSMSGIR
120 130 140 150 160 170
>>CCDS73504.1 NUDT4 gene_id:11163|Hs108|chr12 (129 aa)
initn: 708 init1: 696 opt: 696 Z-score: 880.1 bits: 168.8 E(32554): 1.1e-42
Smith-Waterman score: 696; 91.1% identity (97.3% similar) in 112 aa overlap (52-163:1-112)
30 40 50 60 70 80
pF1KE0 CLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLG
::::::::::::::::::::::::::::::
CCDS73 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG
10 20 30
90 100 110 120 130 140
pF1KE0 VFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWFKVEDAIKVLQCHKPVHAEYLE
.::::::::::::::::::::.::::::::.:::::::::::::::::::::::::::::
CCDS73 IFEQNQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLE
40 50 60 70 80 90
150 160
pF1KE0 KLKLGGSPTNGNSMAPSSPDSDP
::::: ::.:::: .:: ::..
CCDS73 KLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR
100 110 120
>>CCDS76584.1 NUDT4 gene_id:11163|Hs108|chr12 (128 aa)
initn: 688 init1: 475 opt: 677 Z-score: 856.4 bits: 164.4 E(32554): 2.2e-41
Smith-Waterman score: 677; 90.2% identity (96.4% similar) in 112 aa overlap (52-163:1-111)
30 40 50 60 70 80
pF1KE0 CLCFRSEREDEVLLVSSSRYPDRWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLG
::::::::::::::::::::::::::::::
CCDS76 MEPEEEPGGAAVREVYEEAGVKGKLGRLLG
10 20 30
90 100 110 120 130 140
pF1KE0 VFEQNQDRKHRTYVYVLTVTELLEDWEDSVSIGRKREWFKVEDAIKVLQCHKPVHAEYLE
.:: :::::::::::::::::.::::::::.:::::::::::::::::::::::::::::
CCDS76 IFE-NQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLE
40 50 60 70 80
150 160
pF1KE0 KLKLGGSPTNGNSMAPSSPDSDP
::::: ::.:::: .:: ::..
CCDS76 KLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR
90 100 110 120
164 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 23:04:48 2016 done: Thu Nov 3 23:04:49 2016
Total Scan time: 1.660 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]