Result of FASTA (omim) for
pF1KE0136
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0136, 302 aa
1>>>pF1KE0136 302 - 302 aa - 302 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3451+/-0.000405; mu= 14.9569+/- 0.025
mean_var=59.9126+/-12.026, 0's: 0 Z-trim(111.4): 35 B-trim: 41 in 1/50
Lambda= 0.165697
statistics sampled from 19934 (19969) to 19934 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.234), width: 16
Scan time: 6.840
The best scores are: opt bits E(85289)
XP_016884821 (OMIM: 300081) PREDICTED: deoxyribonu ( 302) 1956 476.1 3.7e-134
NP_001009932 (OMIM: 300081) deoxyribonuclease-1-li ( 302) 1956 476.1 3.7e-134
XP_005277886 (OMIM: 300081) PREDICTED: deoxyribonu ( 302) 1956 476.1 3.7e-134
NP_006721 (OMIM: 300081) deoxyribonuclease-1-like ( 302) 1956 476.1 3.7e-134
XP_011529424 (OMIM: 300081) PREDICTED: deoxyribonu ( 302) 1956 476.1 3.7e-134
NP_001290549 (OMIM: 300081) deoxyribonuclease-1-li ( 302) 1956 476.1 3.7e-134
NP_001009934 (OMIM: 300081) deoxyribonuclease-1-li ( 302) 1956 476.1 3.7e-134
NP_001009933 (OMIM: 300081) deoxyribonuclease-1-li ( 302) 1956 476.1 3.7e-134
NP_004935 (OMIM: 602244,614420) deoxyribonuclease ( 305) 782 195.5 1.1e-49
NP_005214 (OMIM: 125505,152700) deoxyribonuclease- ( 282) 626 158.2 1.8e-38
XP_011520695 (OMIM: 125505,152700) PREDICTED: deox ( 282) 626 158.2 1.8e-38
XP_016878488 (OMIM: 125505,152700) PREDICTED: deox ( 282) 626 158.2 1.8e-38
XP_005255205 (OMIM: 125505,152700) PREDICTED: deox ( 276) 556 141.4 1.9e-33
XP_016878485 (OMIM: 125505,152700) PREDICTED: deox ( 304) 556 141.4 2.1e-33
XP_016878483 (OMIM: 125505,152700) PREDICTED: deox ( 304) 556 141.4 2.1e-33
XP_016878487 (OMIM: 125505,152700) PREDICTED: deox ( 304) 556 141.4 2.1e-33
XP_016878482 (OMIM: 125505,152700) PREDICTED: deox ( 304) 556 141.4 2.1e-33
XP_016878481 (OMIM: 125505,152700) PREDICTED: deox ( 304) 556 141.4 2.1e-33
XP_016878484 (OMIM: 125505,152700) PREDICTED: deox ( 304) 556 141.4 2.1e-33
XP_016878486 (OMIM: 125505,152700) PREDICTED: deox ( 304) 556 141.4 2.1e-33
NP_001243489 (OMIM: 602244,614420) deoxyribonuclea ( 275) 545 138.8 1.2e-32
XP_006720917 (OMIM: 125505,152700) PREDICTED: deox ( 213) 499 127.8 1.9e-29
XP_016878491 (OMIM: 125505,152700) PREDICTED: deox ( 235) 429 111.0 2.3e-24
XP_016878490 (OMIM: 125505,152700) PREDICTED: deox ( 235) 429 111.0 2.3e-24
NP_001288609 (OMIM: 602622) deoxyribonuclease-1-li ( 299) 403 104.9 2.1e-22
NP_001365 (OMIM: 602622) deoxyribonuclease-1-like ( 299) 403 104.9 2.1e-22
XP_011520701 (OMIM: 602622) PREDICTED: deoxyribonu ( 390) 403 104.9 2.6e-22
XP_016878496 (OMIM: 125505,152700) PREDICTED: deox ( 184) 258 70.1 3.7e-12
XP_016878494 (OMIM: 125505,152700) PREDICTED: deox ( 187) 218 60.6 2.8e-09
XP_016878493 (OMIM: 125505,152700) PREDICTED: deox ( 187) 218 60.6 2.8e-09
XP_016878492 (OMIM: 125505,152700) PREDICTED: deox ( 187) 218 60.6 2.8e-09
XP_016878495 (OMIM: 125505,152700) PREDICTED: deox ( 187) 218 60.6 2.8e-09
XP_016878489 (OMIM: 125505,152700) PREDICTED: deox ( 279) 218 60.6 4e-09
>>XP_016884821 (OMIM: 300081) PREDICTED: deoxyribonuclea (302 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2529.6 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLPSLLSPQLCP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
XP_016 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLLSLLSPQLCP
250 260 270 280 290 300
pF1KE0 AA
::
XP_016 AA
>>NP_001009932 (OMIM: 300081) deoxyribonuclease-1-like 1 (302 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2529.6 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLPSLLSPQLCP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
NP_001 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLLSLLSPQLCP
250 260 270 280 290 300
pF1KE0 AA
::
NP_001 AA
>>XP_005277886 (OMIM: 300081) PREDICTED: deoxyribonuclea (302 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2529.6 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLPSLLSPQLCP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
XP_005 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLLSLLSPQLCP
250 260 270 280 290 300
pF1KE0 AA
::
XP_005 AA
>>NP_006721 (OMIM: 300081) deoxyribonuclease-1-like 1 pr (302 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2529.6 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLPSLLSPQLCP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
NP_006 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLLSLLSPQLCP
250 260 270 280 290 300
pF1KE0 AA
::
NP_006 AA
>>XP_011529424 (OMIM: 300081) PREDICTED: deoxyribonuclea (302 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2529.6 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLPSLLSPQLCP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
XP_011 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLLSLLSPQLCP
250 260 270 280 290 300
pF1KE0 AA
::
XP_011 AA
>>NP_001290549 (OMIM: 300081) deoxyribonuclease-1-like 1 (302 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2529.6 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLPSLLSPQLCP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
NP_001 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLLSLLSPQLCP
250 260 270 280 290 300
pF1KE0 AA
::
NP_001 AA
>>NP_001009934 (OMIM: 300081) deoxyribonuclease-1-like 1 (302 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2529.6 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLPSLLSPQLCP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
NP_001 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLLSLLSPQLCP
250 260 270 280 290 300
pF1KE0 AA
::
NP_001 AA
>>NP_001009933 (OMIM: 300081) deoxyribonuclease-1-like 1 (302 aa)
initn: 1956 init1: 1956 opt: 1956 Z-score: 2529.6 bits: 476.1 E(85289): 3.7e-134
Smith-Waterman score: 1956; 99.7% identity (99.7% similar) in 302 aa overlap (1-302:1-302)
10 20 30 40 50 60
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVD
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDED
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHGERCRSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLPSLLSPQLCP
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
NP_001 HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLLSLLSPQLCP
250 260 270 280 290 300
pF1KE0 AA
::
NP_001 AA
>>NP_004935 (OMIM: 602244,614420) deoxyribonuclease gamm (305 aa)
initn: 701 init1: 406 opt: 782 Z-score: 1012.8 bits: 195.5 E(85289): 1.1e-49
Smith-Waterman score: 782; 41.3% identity (76.7% similar) in 288 aa overlap (7-287:9-296)
10 20 30 40 50
pF1KE0 MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEV
::.:. ..: :.:::.::.. . .: ...::..:... ::::....:.
NP_004 MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 VDSSGSAIPLLLRELNRFDGSG-PYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYN
::.. :.:...::: . : :. . : .:::.:: : :...:. . ..: :: :.
NP_004 KDSNNRICPILMEKLNRNSRRGITYNYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 D-ED---DVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQ
: .: :::.:::::. :. : ... ..:..::::::.. ::.. : .:. .:...:.
NP_004 DYQDGDADVFSREPFVVWFQSPHTAVKDFVIIPLHTTPETSVKEIDELVEVYTDVKHRWK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 SKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVLHG
... :..::::: :. . :: ...:::.: : :.:.: :::::. ::.:.:::.::.:
NP_004 AENFIFMGDFNAGCSYVPKKAWKNIRLRTDPRFVWLIGDQEDTTVKKSTNCAYDRIVLRG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 ERCRSLL--HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLLLP
.. : . .. ..::: ...:::::::..:::.::: .:. :.: . . :.:.
NP_004 QEIVSSVVPKSNSVFDFQKAYKLTEEEALDVSDHFPVEFKLQSSRAFTNSKKSVTLRKKT
250 260 270 280 290 300
300
pF1KE0 SLLSPQLCPAA
NP_004 KSKRS
>>NP_005214 (OMIM: 125505,152700) deoxyribonuclease-1 pr (282 aa)
initn: 562 init1: 275 opt: 626 Z-score: 811.8 bits: 158.2 E(85289): 1.8e-38
Smith-Waterman score: 626; 39.1% identity (68.8% similar) in 276 aa overlap (6-273:9-282)
10 20 30 40 50
pF1KE0 MHYPTALLFLI-LANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQ
::: : : .:: ...: ::: : . .:.. ... .:.::.: :: ..:
NP_005 MRGMKLLGALLALAALLQGAVSLKIAAFNIQTFGETKMSNATLVSYIVQILSRYDIALVQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 EVVDSSGSAIPLLLRELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVY
:: :: .:. :: .::. :. : . : :::..: : :.. :: ......:: :
NP_005 EVRDSHLTAVGKLLDNLNQ-DAPDTYHYVVSEPLGRNSYKERYLFVYRPDQVSAVDSYYY
70 80 90 100 110
120 130 140 150 160 170
pF1KE0 NDE-----DDVFAREPFVAQFSLPSNVLPSLVLVPLHTTPKAVEKELNALYDVFLEVSQH
.: .:.: ::: ...: . . ...::::..: . :..:::::.:.:...
NP_005 DDGCEPCGNDTFNREPAIVRFFSRFTEVREFAIVPLHAAPGDAVAEIDALYDVYLDVQEK
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 WQSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVIADGEDTTVRASTHCTYDRVVL
: .::.:.::::: :. . .. ....: : : :.:.: :. :::. . :::.:::.:.
NP_005 WGLEDVMLMGDFNAGCSYVRPSQWSSIRLWTSPTFQWLIPDSADTTA-TPTHCAYDRIVV
180 190 200 210 220 230
240 250 260 270 280
pF1KE0 HGERCRSLL--HTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSVQPLSLTVLL
: :. . .: :.: ... :... : ::::::::: ::
NP_005 AGMLLRGAVVPDSALPFNFQAAYGLSDQLAQAISDHYPVEVMLK
240 250 260 270 280
290 300
pF1KE0 LPSLLSPQLCPAA
302 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:06:20 2016 done: Fri Nov 4 01:06:21 2016
Total Scan time: 6.840 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]