Result of FASTA (omim) for
pF1KE0129
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0129, 248 aa
1>>>pF1KE0129 248 - 248 aa - 248 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5425+/-0.000305; mu= 13.8295+/- 0.019
mean_var=67.6386+/-13.512, 0's: 0 Z-trim(116.9): 44 B-trim: 0 in 0/55
Lambda= 0.155947
statistics sampled from 28356 (28401) to 28356 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.333), width: 16
Scan time: 6.850
The best scores are: opt bits E(85289)
NP_689487 (OMIM: 300707,300708) cyclin-related pro ( 248) 1694 389.5 3e-108
NP_001124469 (OMIM: 300707,300708) cyclin-related ( 228) 1525 351.4 7.8e-97
XP_011529516 (OMIM: 300707,300708) PREDICTED: cycl ( 206) 1401 323.5 1.8e-88
XP_011529517 (OMIM: 300707,300708) PREDICTED: cycl ( 206) 1401 323.5 1.8e-88
XP_005277978 (OMIM: 300707,300708) PREDICTED: cycl ( 218) 981 229.0 5.3e-60
XP_005277977 (OMIM: 300707,300708) PREDICTED: cycl ( 238) 981 229.0 5.7e-60
XP_005268211 (OMIM: 603544) PREDICTED: cyclin-K is ( 580) 344 85.9 1.7e-16
NP_001092872 (OMIM: 603544) cyclin-K [Homo sapiens ( 580) 344 85.9 1.7e-16
XP_011535577 (OMIM: 603544) PREDICTED: cyclin-K is ( 580) 344 85.9 1.7e-16
NP_001295114 (OMIM: 613384) cyclin-L1 isoform 2 [H ( 428) 326 81.8 2.2e-15
XP_006713773 (OMIM: 613384) PREDICTED: cyclin-L1 i ( 493) 326 81.8 2.4e-15
NP_064703 (OMIM: 613384) cyclin-L1 isoform 1 [Homo ( 526) 326 81.8 2.6e-15
NP_112199 (OMIM: 613482) cyclin-L2 isoform A [Homo ( 520) 320 80.5 6.5e-15
NP_001232 (OMIM: 603862) cyclin-T2 isoform a [Homo ( 663) 294 74.7 4.6e-13
NP_490595 (OMIM: 603862) cyclin-T2 isoform b [Homo ( 730) 294 74.7 5e-13
NP_001231 (OMIM: 143055) cyclin-T1 isoform a [Homo ( 726) 249 64.6 5.6e-10
NP_001034666 (OMIM: 613482) cyclin-L2 isoform B [H ( 226) 241 62.5 7.1e-10
XP_006715657 (OMIM: 123838) PREDICTED: cyclin-C is ( 282) 210 55.6 1.1e-07
NP_005181 (OMIM: 123838) cyclin-C isoform a [Homo ( 283) 210 55.6 1.1e-07
XP_011540518 (OMIM: 613482) PREDICTED: cyclin-L2 i ( 553) 198 53.0 1.3e-06
XP_016875686 (OMIM: 143055) PREDICTED: cyclin-T1 i ( 646) 194 52.2 2.7e-06
XP_011511313 (OMIM: 613384) PREDICTED: cyclin-L1 i ( 371) 184 49.8 7.9e-06
XP_005247705 (OMIM: 613384) PREDICTED: cyclin-L1 i ( 371) 184 49.8 7.9e-06
NP_001264771 (OMIM: 143055) cyclin-T1 isoform b [H ( 184) 177 48.1 1.3e-05
XP_016860717 (OMIM: 603862) PREDICTED: cyclin-T2 i ( 642) 162 45.0 0.00039
XP_016860716 (OMIM: 603862) PREDICTED: cyclin-T2 i ( 709) 162 45.0 0.00043
NP_001013417 (OMIM: 123838) cyclin-C isoform b [Ho ( 198) 135 38.7 0.0096
>>NP_689487 (OMIM: 300707,300708) cyclin-related protein (248 aa)
initn: 1694 init1: 1694 opt: 1694 Z-score: 2064.4 bits: 389.5 E(85289): 3e-108
Smith-Waterman score: 1694; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248)
10 20 30 40 50 60
pF1KE0 MEAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MEAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 ALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQI
190 200 210 220 230 240
pF1KE0 YTMDTEIP
::::::::
NP_689 YTMDTEIP
>>NP_001124469 (OMIM: 300707,300708) cyclin-related prot (228 aa)
initn: 1560 init1: 1520 opt: 1525 Z-score: 1859.4 bits: 351.4 E(85289): 7.8e-97
Smith-Waterman score: 1525; 96.9% identity (98.2% similar) in 228 aa overlap (1-228:1-228)
10 20 30 40 50 60
pF1KE0 MEAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 ALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQI
:::::::::::::::::::::::::::::::::::::::... : :
NP_001 ALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQIYTMDTEIP
190 200 210 220
pF1KE0 YTMDTEIP
>>XP_011529516 (OMIM: 300707,300708) PREDICTED: cyclin-r (206 aa)
initn: 1401 init1: 1401 opt: 1401 Z-score: 1709.3 bits: 323.5 E(85289): 1.8e-88
Smith-Waterman score: 1401; 100.0% identity (100.0% similar) in 206 aa overlap (43-248:1-206)
20 30 40 50 60 70
pF1KE0 ARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFCETNLDAYDPYLI
::::::::::::::::::::::::::::::
XP_011 MRSIPIATACTIYHKFFCETNLDAYDPYLI
10 20 30
80 90 100 110 120 130
pF1KE0 AMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSIVQCELLMLRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSIVQCELLMLRVL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 RFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHGALCLRFQAQHIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHGALCLRFQAQHIA
100 110 120 130 140 150
200 210 220 230 240
pF1KE0 VAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP
160 170 180 190 200
>>XP_011529517 (OMIM: 300707,300708) PREDICTED: cyclin-r (206 aa)
initn: 1401 init1: 1401 opt: 1401 Z-score: 1709.3 bits: 323.5 E(85289): 1.8e-88
Smith-Waterman score: 1401; 100.0% identity (100.0% similar) in 206 aa overlap (43-248:1-206)
20 30 40 50 60 70
pF1KE0 ARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFCETNLDAYDPYLI
::::::::::::::::::::::::::::::
XP_011 MRSIPIATACTIYHKFFCETNLDAYDPYLI
10 20 30
80 90 100 110 120 130
pF1KE0 AMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSIVQCELLMLRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDSIVQCELLMLRVL
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 RFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHGALCLRFQAQHIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHGALCLRFQAQHIA
100 110 120 130 140 150
200 210 220 230 240
pF1KE0 VAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP
160 170 180 190 200
>>XP_005277978 (OMIM: 300707,300708) PREDICTED: cyclin-r (218 aa)
initn: 1445 init1: 981 opt: 981 Z-score: 1198.3 bits: 229.0 E(85289): 5.3e-60
Smith-Waterman score: 1432; 92.5% identity (93.9% similar) in 228 aa overlap (1-228:1-218)
10 20 30 40 50 60
pF1KE0 MEAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHG
::::::::::::::::::::::: :::::::::::::::::::::::::::
XP_005 IVQCELLMLRVLRFQVSFQHPHK----------NWLNRHSWQRTPVAVTAWALLRDSYHG
130 140 150 160 170
190 200 210 220 230 240
pF1KE0 ALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQI
:::::::::::::::::::::::::::::::::::::::... : :
XP_005 ALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQIYTMDTEIP
180 190 200 210
pF1KE0 YTMDTEIP
>>XP_005277977 (OMIM: 300707,300708) PREDICTED: cyclin-r (238 aa)
initn: 981 init1: 981 opt: 981 Z-score: 1197.7 bits: 229.0 E(85289): 5.7e-60
Smith-Waterman score: 1601; 96.0% identity (96.0% similar) in 248 aa overlap (1-248:1-238)
10 20 30 40 50 60
pF1KE0 MEAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEAPEGGGGGPAARGPEGQPAPEARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSGEPLELDSRFWELRDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQRTPVAVTAWALLRDSYHG
::::::::::::::::::::::: :::::::::::::::::::::::::::
XP_005 IVQCELLMLRVLRFQVSFQHPHK----------NWLNRHSWQRTPVAVTAWALLRDSYHG
130 140 150 160 170
190 200 210 220 230 240
pF1KE0 ALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFNDDLTKPIIDNIVSDLIQI
180 190 200 210 220 230
pF1KE0 YTMDTEIP
::::::::
XP_005 YTMDTEIP
>>XP_005268211 (OMIM: 603544) PREDICTED: cyclin-K isofor (580 aa)
initn: 307 init1: 176 opt: 344 Z-score: 417.2 bits: 85.9 E(85289): 1.7e-16
Smith-Waterman score: 345; 28.1% identity (64.3% similar) in 235 aa overlap (17-242:39-259)
10 20 30 40
pF1KE0 MEAPEGGGGGPAARGPEG-QPAPEARVHFRVARFIMEAGVKLGMRS
:: .:: ::: . . ::::...:..::..
XP_005 SPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHY
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 IPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSG
.::. .:.:. .. . :. . ..::::::: . .:::... .:
XP_005 DTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLN---
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 EPLELDSRFWELRDS----IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSW
: .: .. :. .. : ..:....:... .::...::.: .:.. ....
XP_005 -----DVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKG--DKNKI
130 140 150 160 170
170 180 190 200 210
pF1KE0 QRTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKP----W
:. .. ::... :: .: :... . :::::.::: .. :. . . :: :
XP_005 QK--LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEI--QEWTSKPMYRRW
180 190 200 210 220 230
220 230 240
pF1KE0 WQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP
:. : .:. ....: .....:.
XP_005 WEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPS
240 250 260 270 280 290
>>NP_001092872 (OMIM: 603544) cyclin-K [Homo sapiens] (580 aa)
initn: 307 init1: 176 opt: 344 Z-score: 417.2 bits: 85.9 E(85289): 1.7e-16
Smith-Waterman score: 345; 28.1% identity (64.3% similar) in 235 aa overlap (17-242:39-259)
10 20 30 40
pF1KE0 MEAPEGGGGGPAARGPEG-QPAPEARVHFRVARFIMEAGVKLGMRS
:: .:: ::: . . ::::...:..::..
NP_001 SPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHY
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 IPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSG
.::. .:.:. .. . :. . ..::::::: . .:::... .:
NP_001 DTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLN---
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 EPLELDSRFWELRDS----IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSW
: .: .. :. .. : ..:....:... .::...::.: .:.. ....
NP_001 -----DVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKG--DKNKI
130 140 150 160 170
170 180 190 200 210
pF1KE0 QRTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKP----W
:. .. ::... :: .: :... . :::::.::: .. :. . . :: :
NP_001 QK--LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEI--QEWTSKPMYRRW
180 190 200 210 220 230
220 230 240
pF1KE0 WQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP
:. : .:. ....: .....:.
NP_001 WEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPS
240 250 260 270 280 290
>>XP_011535577 (OMIM: 603544) PREDICTED: cyclin-K isofor (580 aa)
initn: 307 init1: 176 opt: 344 Z-score: 417.2 bits: 85.9 E(85289): 1.7e-16
Smith-Waterman score: 345; 28.1% identity (64.3% similar) in 235 aa overlap (17-242:39-259)
10 20 30 40
pF1KE0 MEAPEGGGGGPAARGPEG-QPAPEARVHFRVARFIMEAGVKLGMRS
:: .:: ::: . . ::::...:..::..
XP_011 SPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHY
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 IPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRYFNPSG
.::. .:.:. .. . :. . ..::::::: . .:::... .:
XP_011 DTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLN---
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 EPLELDSRFWELRDS----IVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSW
: .: .. :. .. : ..:....:... .::...::.: .:.. ....
XP_011 -----DVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKG--DKNKI
130 140 150 160 170
170 180 190 200 210
pF1KE0 QRTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKP----W
:. .. ::... :: .: :... . :::::.::: .. :. . . :: :
XP_011 QK--LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEI--QEWTSKPMYRRW
180 190 200 210 220 230
220 230 240
pF1KE0 WQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP
:. : .:. ....: .....:.
XP_011 WEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPS
240 250 260 270 280 290
>>NP_001295114 (OMIM: 613384) cyclin-L1 isoform 2 [Homo (428 aa)
initn: 320 init1: 145 opt: 326 Z-score: 397.3 bits: 81.8 E(85289): 2.2e-15
Smith-Waterman score: 326; 28.9% identity (59.0% similar) in 239 aa overlap (11-242:66-290)
10 20 30
pF1KE0 MEAPEGGGGGPAARGPEGQPAPEARVHFRV--ARFIMEAG
:. .: : ... .:. ..:. ::
NP_001 TTGGILIGDRLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLP-SETDLRILGCELIQAAG
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE0 VKLGMRSIPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSN
. : . .. .::. ...:.:: .. .. ..::. : ::.:.:: : ::.::: .
NP_001 ILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFH
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE0 RYFNPSGE----PLELDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQN
. . :. :: ::. . . ...... : .:. : : : .:::: .. :: :.
NP_001 HLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLEC
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE0 WLNRHSWQRTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAE
:. : ::: . :: . . .::: . :: : .::: .. . .:.
NP_001 ERNQTLVQ------TAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPT-----
220 230 240 250 260
220 230 240
pF1KE0 KP-WWQVFNDDLTKPIIDNIVSDLIQIYTMDTEIP
.: :. .:. :. :..: . ...::
NP_001 RPHWFLLFG--TTEEEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLN
270 280 290 300 310 320
248 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:47:33 2016 done: Fri Nov 4 01:47:34 2016
Total Scan time: 6.850 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]