Result of FASTA (ccds) for
pF1KE0124
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0124, 327 aa
1>>>pF1KE0124 327 - 327 aa - 327 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.5309+/-0.000728; mu= 8.3988+/- 0.044
mean_var=148.8840+/-30.093, 0's: 0 Z-trim(114.3): 10 B-trim: 0 in 0/53
Lambda= 0.105111
statistics sampled from 14872 (14878) to 14872 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.781), E-opt: 0.2 (0.457), width: 16
Scan time: 2.990
The best scores are: opt bits E(32554)
CCDS11910.1 MAPRE2 gene_id:10982|Hs108|chr18 ( 327) 2202 344.7 6e-95
CCDS45850.1 MAPRE2 gene_id:10982|Hs108|chr18 ( 315) 1930 303.4 1.5e-82
CCDS45851.1 MAPRE2 gene_id:10982|Hs108|chr18 ( 284) 1898 298.6 4e-81
CCDS58619.1 MAPRE2 gene_id:10982|Hs108|chr18 ( 274) 1646 260.3 1.2e-69
CCDS1731.1 MAPRE3 gene_id:22924|Hs108|chr2 ( 281) 1142 183.9 1.3e-46
CCDS13208.1 MAPRE1 gene_id:22919|Hs108|chr20 ( 268) 1018 165.1 5.7e-41
>>CCDS11910.1 MAPRE2 gene_id:10982|Hs108|chr18 (327 aa)
initn: 2202 init1: 2202 opt: 2202 Z-score: 1818.1 bits: 344.7 E(32554): 6e-95
Smith-Waterman score: 2202; 99.7% identity (100.0% similar) in 327 aa overlap (1-327:1-327)
10 20 30 40 50 60
pF1KE0 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDL
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS11 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
250 260 270 280 290 300
310 320
pF1KE0 EEHEGHTEEPEAEEQAHEQQPPQQEEY
:::::::::::::::::::::::::::
CCDS11 EEHEGHTEEPEAEEQAHEQQPPQQEEY
310 320
>>CCDS45850.1 MAPRE2 gene_id:10982|Hs108|chr18 (315 aa)
initn: 1926 init1: 1926 opt: 1930 Z-score: 1595.5 bits: 303.4 E(32554): 1.5e-82
Smith-Waterman score: 1930; 91.2% identity (94.1% similar) in 320 aa overlap (8-327:1-315)
10 20 30 40 50 60
pF1KE0 MPGPTQTLSPNGENNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSR
.. : ... . : :.. : :: ::::::::::::::::::::
CCDS45 MKQNRDQKCPVSQRNSSFQQPGRKPGCS-----SWGMAVNVYSTSITQETMSR
10 20 30 40
70 80 90 100 110 120
pF1KE0 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKL
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE0 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIP
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE0 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDL
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS45 PPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDL
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE0 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYAS
230 240 250 260 270 280
310 320
pF1KE0 EEHEGHTEEPEAEEQAHEQQPPQQEEY
:::::::::::::::::::::::::::
CCDS45 EEHEGHTEEPEAEEQAHEQQPPQQEEY
290 300 310
>>CCDS45851.1 MAPRE2 gene_id:10982|Hs108|chr18 (284 aa)
initn: 1898 init1: 1898 opt: 1898 Z-score: 1569.9 bits: 298.6 E(32554): 4e-81
Smith-Waterman score: 1898; 99.6% identity (100.0% similar) in 284 aa overlap (44-327:1-284)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
::::::::::::::::::::::::::::::
CCDS45 MAVNVYSTSITQETMSRHDIIAWVNDIVSL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSASKSDKDLETQVIQLNEQVHS
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
CCDS45 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGSASKSDKDLETQVIQLNEQVHS
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE0 LKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTEEPEAE
220 230 240 250 260 270
320
pF1KE0 EQAHEQQPPQQEEY
::::::::::::::
CCDS45 EQAHEQQPPQQEEY
280
>>CCDS58619.1 MAPRE2 gene_id:10982|Hs108|chr18 (274 aa)
initn: 1646 init1: 1646 opt: 1646 Z-score: 1363.6 bits: 260.3 E(32554): 1.2e-69
Smith-Waterman score: 1646; 99.2% identity (100.0% similar) in 245 aa overlap (83-327:30-274)
60 70 80 90 100 110
pF1KE0 ITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEH
.:::::::::::::::::::::::::::::
CCDS58 MARTTTTSSRIITGPSFLSGSTQCAGSVPTGAAYCQFMDMLFPGCISLKKVKFQAKLEH
10 20 30 40 50
120 130 140 150 160 170
pF1KE0 EYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEA
60 70 80 90 100 110
180 190 200 210 220 230
pF1KE0 RQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGS
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS58 RQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRASSSGS
120 130 140 150 160 170
240 250 260 270 280 290
pF1KE0 ASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQR
180 190 200 210 220 230
300 310 320
pF1KE0 LMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY
:::::::::::::::::::::::::::::::::::
CCDS58 LMDILYASEEHEGHTEEPEAEEQAHEQQPPQQEEY
240 250 260 270
>>CCDS1731.1 MAPRE3 gene_id:22924|Hs108|chr2 (281 aa)
initn: 1173 init1: 880 opt: 1142 Z-score: 950.3 bits: 183.9 E(32554): 1.3e-46
Smith-Waterman score: 1142; 59.2% identity (83.0% similar) in 289 aa overlap (44-327:1-281)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
:::::::::.:.:..::::..::::: . :
CCDS17 MAVNVYSTSVTSENLSRHDMLAWVNDSLHL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
::::.::::::::::::::::::::. :.:::::::::::::::::.:::.::.:.:::.
CCDS17 NYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
:::::::::.::::..::::::::.:::::::.:.:. ::::::. :::.::.:::: :
CCDS17 IPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSK
100 110 120 130 140 150
200 210 220 230 240
pF1KE0 KSHHANSPTAGAAKSSPAA-KPGSTPSRPSSTKRA----SSSGSASKSDKDLETQVIQLN
: . : ..::.. : .: .: :.. .. :: .. .. ..:...::
CCDS17 KLIGTAVPQ----RTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHETDAQILELN
160 170 180 190 200
250 260 270 280 290 300
pF1KE0 EQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEEHEGHTE
.:. .:::...:.::::::::.:::.:::.:::: .::. ... .. ::::.:: . :
CCDS17 QQLVDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPE
210 220 230 240 250 260
310 320
pF1KE0 EPEAEEQAHEQQPPQQEEY
. : :: :.:. .:.::
CCDS17 DDEIEE--HQQE--DQDEY
270 280
>>CCDS13208.1 MAPRE1 gene_id:22919|Hs108|chr20 (268 aa)
initn: 1050 init1: 784 opt: 1018 Z-score: 849.0 bits: 165.1 E(32554): 5.7e-41
Smith-Waterman score: 1021; 55.7% identity (79.1% similar) in 282 aa overlap (44-313:1-267)
20 30 40 50 60 70
pF1KE0 NNNDIIQDNNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSL
:::::::::.:....::::..::.:. ..:
CCDS13 MAVNVYSTSVTSDNLSRHDMLAWINESLQL
10 20 30
80 90 100 110 120 130
pF1KE0 NYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKV
: ::.::::::::::::::::::: :.:::::::::::::::.:::.:::.::::.:::.
CCDS13 NLTKIEQLCSGAAYCQFMDMLFPGSIALKKVKFQAKLEHEYIQNFKILQAGFKRMGVDKI
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 IPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPK
:::.:::::.::::..:.::::::.:::::::.:::: :::::.. :. .: ::
CCDS13 IPVDKLVKGKFQDNFEFVQWFKKFFDANYDGKDYDPVAARQGQETAVAPSLVAPALNKPK
100 110 120 130 140 150
200 210 220 230 240
pF1KE0 KSHHANSPTAGAAKSSPAAKPGSTPSRPSSTKRASSSGSAS----KSDKDL---ETQVIQ
: : .. ...:.:: ::.:.... .:. ... . . .. .
CCDS13 K---------------PLTSSSAAPQRPISTQRTAAAPKAGPGVVRKNPGVGNGDDEAAE
160 170 180 190
250 260 270 280 290 300
pF1KE0 LNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMDILYASEE----
: .::. :::..: .::::::::::::.:::.:::. ::: ..::..:::::..:
CCDS13 LMQQVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDPVLQRIVDILYATDEGFVI
200 210 220 230 240 250
310 320
pF1KE0 -HEGHTEEPEAEEQAHEQQPPQQEEY
:: .: . :
CCDS13 PDEGGPQEEQEEY
260
327 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 02:01:00 2016 done: Fri Nov 4 02:01:01 2016
Total Scan time: 2.990 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]