Result of FASTA (ccds) for
pF1KE0011
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0011, 813 aa
1>>>pF1KE0011 813 - 813 aa - 813 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.4055+/-0.00133; mu= 2.5627+/- 0.080
mean_var=239.1727+/-49.244, 0's: 0 Z-trim(107.7): 66 B-trim: 56 in 1/51
Lambda= 0.082931
statistics sampled from 9718 (9762) to 9718 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.636), E-opt: 0.2 (0.3), width: 16
Scan time: 4.060
The best scores are: opt bits E(32554)
CCDS4111.1 MCC gene_id:4163|Hs108|chr5 ( 829) 5053 618.6 1.3e-176
CCDS43351.1 MCC gene_id:4163|Hs108|chr5 (1019) 5053 618.7 1.5e-176
>>CCDS4111.1 MCC gene_id:4163|Hs108|chr5 (829 aa)
initn: 5053 init1: 5053 opt: 5053 Z-score: 3284.2 bits: 618.6 E(32554): 1.3e-176
Smith-Waterman score: 5053; 99.6% identity (100.0% similar) in 810 aa overlap (4-813:20-829)
10 20 30 40
pF1KE0 MGLLHSAALASLKGDIVELNKRLQQTERERDLLEKKLAKAQCEQ
:::::::::::::::::::::::::::::::::::::::::
CCDS41 MNSGVAMKYGNDSSAELSELHSAALASLKGDIVELNKRLQQTERERDLLEKKLAKAQCEQ
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 SHLMREHEDVRERTTLRYEERITELHSVIAELNKKIDRLQGTTIREEDEYSELRSELSQS
::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SHLMREHEDVQERTTLRYEERITELHSVIAELNKKIDRLQGTTIREEDEYSELRSELSQS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 QHEVNEDSRSMDQDQTSVSIPENQSTMVTADMDNCSDLNSELQRVLTGLENVVCGRKKSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 QHEVNEDSRSMDQDQTSVSIPENQSTMVTADMDNCSDLNSELQRVLTGLENVVCGRKKSS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 CSLSVAEVDRHIEQLTTASEHCDLAIKTVEEIEGVLGRDLYPNLAEERSRWEKELAGLRE
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 CSLSVAEVDKHIEQLTTASEHCDLAIKTVEEIEGVLGRDLYPNLAEERSRWEKELAGLRE
190 200 210 220 230 240
230 240 250 260 270 280
pF1KE0 ENESLTAMLCSKEEELNRTKATMNAIREERDRLRRRVRELQTRLQSVQATGPSSPGRLTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ENESLTAMLCSKEEELNRTKATMNAIREERDRLRRRVRELQTRLQSVQATGPSSPGRLTS
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE0 TNRPINPSTGELSTSSSSNDIPIAKIAERVKLSKTRSESSSSDRPVLGSEISSIGVSSSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TNRPINPSTGELSTSSSSNDIPIAKIAERVKLSKTRSESSSSDRPVLGSEISSIGVSSSV
310 320 330 340 350 360
350 360 370 380 390 400
pF1KE0 AEHLAHSLQDCSNIQEIFQTLYSHGSAISESKIREFEVETERLNSRIEHLKSQNDLLTIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AEHLAHSLQDCSNIQEIFQTLYSHGSAISESKIREFEVETERLNSRIEHLKSQNDLLTIT
370 380 390 400 410 420
410 420 430 440 450 460
pF1KE0 LEECKSNAERMSMLVGKYESNATALRLALQYSEQCIEAYELLLALAESEQSLILGQFRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LEECKSNAERMSMLVGKYESNATALRLALQYSEQCIEAYELLLALAESEQSLILGQFRAA
430 440 450 460 470 480
470 480 490 500 510 520
pF1KE0 GVGSSPGDQSGDENITQMLKRAHDCRKTAENAAKALLMRLDGSCGGAFAVAGCSVQPWES
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
CCDS41 GVGSSPGDQSGDENITQMLKRAHDCRKTAENAAKALLMKLDGSCGGAFAVAGCSVQPWES
490 500 510 520 530 540
530 540 550 560 570 580
pF1KE0 LSSNSHTSTTSSTASSCDTEFTKEDEQRLKDYIQQLKNDRAAVKLTMLELESIHIDPLSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LSSNSHTSTTSSTASSCDTEFTKEDEQRLKDYIQQLKNDRAAVKLTMLELESIHIDPLSY
550 560 570 580 590 600
590 600 610 620 630 640
pF1KE0 DVKPRGDSQRLDLENAVLMQELMAMKEEMAELKAQLYLLEKEKKALELKLSTREAQEQAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 DVKPRGDSQRLDLENAVLMQELMAMKEEMAELKAQLYLLEKEKKALELKLSTREAQEQAY
610 620 630 640 650 660
650 660 670 680 690 700
pF1KE0 LVHIEHLKSEVEEQKEQRMRSLSSTSSGSKDKPGKECADAASPALSLAELRTTCSENELA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 LVHIEHLKSEVEEQKEQRMRSLSSTSSGSKDKPGKECADAASPALSLAELRTTCSENELA
670 680 690 700 710 720
710 720 730 740 750 760
pF1KE0 AEFTNAIRREKKLKARVQELVSALERLTKSSEIRHQQSAEFVNDLKRANSNLVAAYEKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 AEFTNAIRREKKLKARVQELVSALERLTKSSEIRHQQSAEFVNDLKRANSNLVAAYEKAK
730 740 750 760 770 780
770 780 790 800 810
pF1KE0 KKHQNKLKKLESQMMAMVERHETQVRMLKQRIALLEEENSRPHTNETSL
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 KKHQNKLKKLESQMMAMVERHETQVRMLKQRIALLEEENSRPHTNETSL
790 800 810 820
>>CCDS43351.1 MCC gene_id:4163|Hs108|chr5 (1019 aa)
initn: 5053 init1: 5053 opt: 5053 Z-score: 3282.9 bits: 618.7 E(32554): 1.5e-176
Smith-Waterman score: 5053; 99.6% identity (100.0% similar) in 810 aa overlap (4-813:210-1019)
10 20 30
pF1KE0 MGLLHSAALASLKGDIVELNKRLQQTERERDLL
::::::::::::::::::::::::::::::
CCDS43 HQQAALHKLLTQSPHIGNSVGGSYLELANTLHSAALASLKGDIVELNKRLQQTERERDLL
180 190 200 210 220 230
40 50 60 70 80 90
pF1KE0 EKKLAKAQCEQSHLMREHEDVRERTTLRYEERITELHSVIAELNKKIDRLQGTTIREEDE
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
CCDS43 EKKLAKAQCEQSHLMREHEDVQERTTLRYEERITELHSVIAELNKKIDRLQGTTIREEDE
240 250 260 270 280 290
100 110 120 130 140 150
pF1KE0 YSELRSELSQSQHEVNEDSRSMDQDQTSVSIPENQSTMVTADMDNCSDLNSELQRVLTGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YSELRSELSQSQHEVNEDSRSMDQDQTSVSIPENQSTMVTADMDNCSDLNSELQRVLTGL
300 310 320 330 340 350
160 170 180 190 200 210
pF1KE0 ENVVCGRKKSSCSLSVAEVDRHIEQLTTASEHCDLAIKTVEEIEGVLGRDLYPNLAEERS
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
CCDS43 ENVVCGRKKSSCSLSVAEVDKHIEQLTTASEHCDLAIKTVEEIEGVLGRDLYPNLAEERS
360 370 380 390 400 410
220 230 240 250 260 270
pF1KE0 RWEKELAGLREENESLTAMLCSKEEELNRTKATMNAIREERDRLRRRVRELQTRLQSVQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RWEKELAGLREENESLTAMLCSKEEELNRTKATMNAIREERDRLRRRVRELQTRLQSVQA
420 430 440 450 460 470
280 290 300 310 320 330
pF1KE0 TGPSSPGRLTSTNRPINPSTGELSTSSSSNDIPIAKIAERVKLSKTRSESSSSDRPVLGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TGPSSPGRLTSTNRPINPSTGELSTSSSSNDIPIAKIAERVKLSKTRSESSSSDRPVLGS
480 490 500 510 520 530
340 350 360 370 380 390
pF1KE0 EISSIGVSSSVAEHLAHSLQDCSNIQEIFQTLYSHGSAISESKIREFEVETERLNSRIEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 EISSIGVSSSVAEHLAHSLQDCSNIQEIFQTLYSHGSAISESKIREFEVETERLNSRIEH
540 550 560 570 580 590
400 410 420 430 440 450
pF1KE0 LKSQNDLLTITLEECKSNAERMSMLVGKYESNATALRLALQYSEQCIEAYELLLALAESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LKSQNDLLTITLEECKSNAERMSMLVGKYESNATALRLALQYSEQCIEAYELLLALAESE
600 610 620 630 640 650
460 470 480 490 500 510
pF1KE0 QSLILGQFRAAGVGSSPGDQSGDENITQMLKRAHDCRKTAENAAKALLMRLDGSCGGAFA
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
CCDS43 QSLILGQFRAAGVGSSPGDQSGDENITQMLKRAHDCRKTAENAAKALLMKLDGSCGGAFA
660 670 680 690 700 710
520 530 540 550 560 570
pF1KE0 VAGCSVQPWESLSSNSHTSTTSSTASSCDTEFTKEDEQRLKDYIQQLKNDRAAVKLTMLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VAGCSVQPWESLSSNSHTSTTSSTASSCDTEFTKEDEQRLKDYIQQLKNDRAAVKLTMLE
720 730 740 750 760 770
580 590 600 610 620 630
pF1KE0 LESIHIDPLSYDVKPRGDSQRLDLENAVLMQELMAMKEEMAELKAQLYLLEKEKKALELK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LESIHIDPLSYDVKPRGDSQRLDLENAVLMQELMAMKEEMAELKAQLYLLEKEKKALELK
780 790 800 810 820 830
640 650 660 670 680 690
pF1KE0 LSTREAQEQAYLVHIEHLKSEVEEQKEQRMRSLSSTSSGSKDKPGKECADAASPALSLAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LSTREAQEQAYLVHIEHLKSEVEEQKEQRMRSLSSTSSGSKDKPGKECADAASPALSLAE
840 850 860 870 880 890
700 710 720 730 740 750
pF1KE0 LRTTCSENELAAEFTNAIRREKKLKARVQELVSALERLTKSSEIRHQQSAEFVNDLKRAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LRTTCSENELAAEFTNAIRREKKLKARVQELVSALERLTKSSEIRHQQSAEFVNDLKRAN
900 910 920 930 940 950
760 770 780 790 800 810
pF1KE0 SNLVAAYEKAKKKHQNKLKKLESQMMAMVERHETQVRMLKQRIALLEEENSRPHTNETSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SNLVAAYEKAKKKHQNKLKKLESQMMAMVERHETQVRMLKQRIALLEEENSRPHTNETSL
960 970 980 990 1000 1010
813 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 08:27:05 2016 done: Fri Nov 4 08:27:06 2016
Total Scan time: 4.060 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]