Result of FASTA (omim) for
pF1KB9987
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9987, 574 aa
1>>>pF1KB9987 574 - 574 aa - 574 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.3100+/-0.000387; mu= -8.6178+/- 0.024
mean_var=333.2613+/-68.266, 0's: 0 Z-trim(123.0): 7 B-trim: 121 in 1/56
Lambda= 0.070256
statistics sampled from 41982 (41992) to 41982 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.789), E-opt: 0.2 (0.492), width: 16
Scan time: 12.770
The best scores are: opt bits E(85289)
NP_671733 (OMIM: 607043,614070,615527) adapter pro ( 574) 4020 421.2 4.4e-117
XP_011533688 (OMIM: 607043,614070,615527) PREDICTE ( 574) 4020 421.2 4.4e-117
NP_679211 (OMIM: 607043,614070,615527) adapter pro ( 565) 3956 414.7 3.9e-115
NP_001157753 (OMIM: 607043,614070,615527) adapter ( 564) 3938 412.9 1.4e-114
NP_001157755 (OMIM: 607043,614070,615527) adapter ( 109) 743 88.6 1.1e-17
XP_006715382 (OMIM: 607043,614070,615527) PREDICTE ( 109) 743 88.6 1.1e-17
>>NP_671733 (OMIM: 607043,614070,615527) adapter protein (574 aa)
initn: 4020 init1: 4020 opt: 4020 Z-score: 2223.0 bits: 421.2 E(85289): 4.4e-117
Smith-Waterman score: 4020; 99.8% identity (100.0% similar) in 574 aa overlap (1-574:1-574)
10 20 30 40 50 60
pF1KB9 MPPQLQETRMNRSIPVEVDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_671 MPPQLQETRMNRSIPVEVDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 MLHNSSGDFSQAHSTLKLANHQRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKAFPSGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_671 MLHNSSGDFSQAHSTLKLANHQRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKAFPSGCS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 AVSEPASESVVGALPAEHQFSFMEKRNQWLVSQLSAASPDTGHDSDKSDQSLPNASADSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_671 AVSEPASESVVGALPAEHQFSFMEKRNQWLVSQLSAASPDTGHDSDKSDQSLPNASADSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GGSQEMVQRPQPHRNRAGLDLPTIDTGYDSQPQDVLGIRQLERPLPLTSVCYPQDLPRPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_671 GGSQEMVQRPQPHRNRAGLDLPTIDTGYDSQPQDVLGIRQLERPLPLTSVCYPQDLPRPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 RSREFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHDYPRAAYQQVIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_671 RSREFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHDYPRAAYQQVIQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PALPGQPLPGASVRGLHPVQKVILNYPSPWDQEERPAQRDCSFPGLPRHQDQPHHQPPNR
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_671 PALPGQPLPGASVRGLHPVQKVILNYPSPWDHEERPAQRDCSFPGLPRHQDQPHHQPPNR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 AGAPGESLECPAELRPQVPQPPSPAAVPRPPSNPPARGTLKTSNLPEELRKVFITYSMDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_671 AGAPGESLECPAELRPQVPQPPSPAAVPRPPSNPPARGTLKTSNLPEELRKVFITYSMDT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 AMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_671 AMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 GAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_671 GAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYS
490 500 510 520 530 540
550 560 570
pF1KB9 WPKNKKNILLRLLREEEYVAPPRGPLPTLQVVPL
::::::::::::::::::::::::::::::::::
NP_671 WPKNKKNILLRLLREEEYVAPPRGPLPTLQVVPL
550 560 570
>>XP_011533688 (OMIM: 607043,614070,615527) PREDICTED: a (574 aa)
initn: 4020 init1: 4020 opt: 4020 Z-score: 2223.0 bits: 421.2 E(85289): 4.4e-117
Smith-Waterman score: 4020; 99.8% identity (100.0% similar) in 574 aa overlap (1-574:1-574)
10 20 30 40 50 60
pF1KB9 MPPQLQETRMNRSIPVEVDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPPQLQETRMNRSIPVEVDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 MLHNSSGDFSQAHSTLKLANHQRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKAFPSGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLHNSSGDFSQAHSTLKLANHQRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKAFPSGCS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 AVSEPASESVVGALPAEHQFSFMEKRNQWLVSQLSAASPDTGHDSDKSDQSLPNASADSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVSEPASESVVGALPAEHQFSFMEKRNQWLVSQLSAASPDTGHDSDKSDQSLPNASADSL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GGSQEMVQRPQPHRNRAGLDLPTIDTGYDSQPQDVLGIRQLERPLPLTSVCYPQDLPRPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GGSQEMVQRPQPHRNRAGLDLPTIDTGYDSQPQDVLGIRQLERPLPLTSVCYPQDLPRPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 RSREFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHDYPRAAYQQVIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSREFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHDYPRAAYQQVIQ
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 PALPGQPLPGASVRGLHPVQKVILNYPSPWDQEERPAQRDCSFPGLPRHQDQPHHQPPNR
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_011 PALPGQPLPGASVRGLHPVQKVILNYPSPWDHEERPAQRDCSFPGLPRHQDQPHHQPPNR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 AGAPGESLECPAELRPQVPQPPSPAAVPRPPSNPPARGTLKTSNLPEELRKVFITYSMDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGAPGESLECPAELRPQVPQPPSPAAVPRPPSNPPARGTLKTSNLPEELRKVFITYSMDT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 AMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 GAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYS
490 500 510 520 530 540
550 560 570
pF1KB9 WPKNKKNILLRLLREEEYVAPPRGPLPTLQVVPL
::::::::::::::::::::::::::::::::::
XP_011 WPKNKKNILLRLLREEEYVAPPRGPLPTLQVVPL
550 560 570
>>NP_679211 (OMIM: 607043,614070,615527) adapter protein (565 aa)
initn: 3956 init1: 3956 opt: 3956 Z-score: 2188.0 bits: 414.7 E(85289): 3.9e-115
Smith-Waterman score: 3956; 99.8% identity (100.0% similar) in 565 aa overlap (10-574:1-565)
10 20 30 40 50 60
pF1KB9 MPPQLQETRMNRSIPVEVDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPT
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_679 MNRSIPVEVDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPT
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 MLHNSSGDFSQAHSTLKLANHQRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKAFPSGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_679 MLHNSSGDFSQAHSTLKLANHQRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKAFPSGCS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 AVSEPASESVVGALPAEHQFSFMEKRNQWLVSQLSAASPDTGHDSDKSDQSLPNASADSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_679 AVSEPASESVVGALPAEHQFSFMEKRNQWLVSQLSAASPDTGHDSDKSDQSLPNASADSL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 GGSQEMVQRPQPHRNRAGLDLPTIDTGYDSQPQDVLGIRQLERPLPLTSVCYPQDLPRPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_679 GGSQEMVQRPQPHRNRAGLDLPTIDTGYDSQPQDVLGIRQLERPLPLTSVCYPQDLPRPL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 RSREFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHDYPRAAYQQVIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_679 RSREFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHDYPRAAYQQVIQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 PALPGQPLPGASVRGLHPVQKVILNYPSPWDQEERPAQRDCSFPGLPRHQDQPHHQPPNR
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_679 PALPGQPLPGASVRGLHPVQKVILNYPSPWDHEERPAQRDCSFPGLPRHQDQPHHQPPNR
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB9 AGAPGESLECPAELRPQVPQPPSPAAVPRPPSNPPARGTLKTSNLPEELRKVFITYSMDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_679 AGAPGESLECPAELRPQVPQPPSPAAVPRPPSNPPARGTLKTSNLPEELRKVFITYSMDT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB9 AMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_679 AMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVE
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB9 GAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_679 GAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYS
480 490 500 510 520 530
550 560 570
pF1KB9 WPKNKKNILLRLLREEEYVAPPRGPLPTLQVVPL
::::::::::::::::::::::::::::::::::
NP_679 WPKNKKNILLRLLREEEYVAPPRGPLPTLQVVPL
540 550 560
>>NP_001157753 (OMIM: 607043,614070,615527) adapter prot (564 aa)
initn: 3208 init1: 3208 opt: 3938 Z-score: 2178.2 bits: 412.9 E(85289): 1.4e-114
Smith-Waterman score: 3938; 99.6% identity (99.8% similar) in 565 aa overlap (10-574:1-564)
10 20 30 40 50 60
pF1KB9 MPPQLQETRMNRSIPVEVDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPT
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNRSIPVEVDESEPYPSQLLKPIPEYSPEEESEPPAPNIRNMAPNSLSAPT
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 MLHNSSGDFSQAHSTLKLANHQRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKAFPSGCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLHNSSGDFSQAHSTLKLANHQRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKAFPSGCS
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 AVSEPASESVVGALPAEHQFSFMEKRNQWLVSQLSAASPDTGHDSDKSDQSLPNASADSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVSEPASESVVGALPAEHQFSFMEKRNQWLVSQLSAASPDTGHDSDKSDQSLPNASADSL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 GGSQEMVQRPQPHRNRAGLDLPTIDTGYDSQPQDVLGIRQLERPLPLTSVCYPQDLPRPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGSQEMVQRPQPHRNRAGLDLPTIDTGYDSQPQDVLGIRQLERPLPLTSVCYPQDLPRPL
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 RSREFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHDYPRAAYQQVIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSREFPQFEPQRYPACAQMLPPNLSPHAPWNYHYHCPGSPDHQVPYGHDYPRAAYQQVIQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 PALPGQPLPGASVRGLHPVQKVILNYPSPWDQEERPAQRDCSFPGLPRHQDQPHHQPPNR
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
NP_001 PALPGQPLPGASVRGLHPVQKVILNYPSPWDHEERPAQRDCSFPGLPRHQDQPHHQPPNR
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB9 AGAPGESLECPAELRPQVPQPPSPAAVPRPPSNPPARGTLKTSNLPEELRKVFITYSMDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGAPGESLECPAELRPQVPQPPSPAAVPRPPSNPPARGTLKTSNLPEELRKVFITYSMDT
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB9 AMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVE
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
NP_001 AMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRD-TVMIIVAISPKYKQDVE
420 430 440 450 460 470
490 500 510 520 530 540
pF1KB9 GAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAESQLDEDEHGLHTKYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYS
480 490 500 510 520 530
550 560 570
pF1KB9 WPKNKKNILLRLLREEEYVAPPRGPLPTLQVVPL
::::::::::::::::::::::::::::::::::
NP_001 WPKNKKNILLRLLREEEYVAPPRGPLPTLQVVPL
540 550 560
>>NP_001157755 (OMIM: 607043,614070,615527) adapter prot (109 aa)
initn: 743 init1: 743 opt: 743 Z-score: 438.2 bits: 88.6 E(85289): 1.1e-17
Smith-Waterman score: 743; 100.0% identity (100.0% similar) in 109 aa overlap (466-574:1-109)
440 450 460 470 480 490
pF1KB9 FQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVEGAESQLDEDEHGLHT
::::::::::::::::::::::::::::::
NP_001 MIIVAISPKYKQDVEGAESQLDEDEHGLHT
10 20 30
500 510 520 530 540 550
pF1KB9 KYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYSWPKNKKNILLRLLRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYSWPKNKKNILLRLLRE
40 50 60 70 80 90
560 570
pF1KB9 EEYVAPPRGPLPTLQVVPL
:::::::::::::::::::
NP_001 EEYVAPPRGPLPTLQVVPL
100
>>XP_006715382 (OMIM: 607043,614070,615527) PREDICTED: a (109 aa)
initn: 743 init1: 743 opt: 743 Z-score: 438.2 bits: 88.6 E(85289): 1.1e-17
Smith-Waterman score: 743; 100.0% identity (100.0% similar) in 109 aa overlap (466-574:1-109)
440 450 460 470 480 490
pF1KB9 FQTAIDIFEDRIRGIDIIKWMERYLRDKTVMIIVAISPKYKQDVEGAESQLDEDEHGLHT
::::::::::::::::::::::::::::::
XP_006 MIIVAISPKYKQDVEGAESQLDEDEHGLHT
10 20 30
500 510 520 530 540 550
pF1KB9 KYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYSWPKNKKNILLRLLRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KYIHRMMQIEFIKQGSMNFRFIPVLFPNAKKEHVPTWLQNTHVYSWPKNKKNILLRLLRE
40 50 60 70 80 90
560 570
pF1KB9 EEYVAPPRGPLPTLQVVPL
:::::::::::::::::::
XP_006 EEYVAPPRGPLPTLQVVPL
100
574 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 16:05:34 2016 done: Sat Nov 5 16:05:35 2016
Total Scan time: 12.770 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]