Result of FASTA (ccds) for
pF1KB9981
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9981, 561 aa
1>>>pF1KB9981 561 - 561 aa - 561 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.4574+/-0.00106; mu= -16.3871+/- 0.064
mean_var=527.7132+/-110.277, 0's: 0 Z-trim(117.7): 45 B-trim: 201 in 1/52
Lambda= 0.055831
statistics sampled from 18478 (18523) to 18478 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.824), E-opt: 0.2 (0.569), width: 16
Scan time: 4.730
The best scores are: opt bits E(32554)
CCDS9595.1 EFS gene_id:10278|Hs108|chr14 ( 561) 3901 328.6 1.3e-89
CCDS9596.1 EFS gene_id:10278|Hs108|chr14 ( 468) 3218 273.5 4e-73
CCDS61404.1 EFS gene_id:10278|Hs108|chr14 ( 392) 2090 182.6 7.8e-46
>>CCDS9595.1 EFS gene_id:10278|Hs108|chr14 (561 aa)
initn: 3901 init1: 3901 opt: 3901 Z-score: 1722.6 bits: 328.6 E(32554): 1.3e-89
Smith-Waterman score: 3901; 100.0% identity (100.0% similar) in 561 aa overlap (1-561:1-561)
10 20 30 40 50 60
pF1KB9 MAIATSTQLARALYDNTAESPQELSFRRGDVLRVLQREGAGGLDGWCLCSLHGQQGIVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MAIATSTQLARALYDNTAESPQELSFRRGDVLRVLQREGAGGLDGWCLCSLHGQQGIVPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 NRVKLLPAGPAPKPSLSPASPAQPGSPYPAPDHSNEDQEVYVVPPPARPCPTSGPPAGPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 NRVKLLPAGPAPKPSLSPASPAQPGSPYPAPDHSNEDQEVYVVPPPARPCPTSGPPAGPC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 PPSPDLIYKIPRASGTQLAAPRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAPQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 PPSPDLIYKIPRASGTQLAAPRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAPQP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 PGEDDAPYDVPLTPKPPAELEPDLEWEGGREPGPPIYAAPSNLKRASALLNLYEAPEELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 PGEDDAPYDVPLTPKPPAELEPDLEWEGGREPGPPIYAAPSNLKRASALLNLYEAPEELL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 ADGEGGGTDEGIYDVPLLGPEAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 ADGEGGGTDEGIYDVPLLGPEAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 SLSRRPLPALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 SLSRRPLPALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEGRE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 MEDDPAGHHNEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQACTGDPELPERGMPAPQEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MEDDPAGHHNEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQACTGDPELPERGMPAPQEAL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 SPGEPLVVSTGDLQLLYFYAGQCQSHYSALQAAVAALMSSTQANQPPRLFVPHSKRVVVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 SPGEPLVVSTGDLQLLYFYAGQCQSHYSALQAAVAALMSSTQANQPPRLFVPHSKRVVVA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 AHRLVFVGDTLGRLAASAPLRAQVRAAGTALGQALRATVLAVKGAALGYPSSPAIQEMVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 AHRLVFVGDTLGRLAASAPLRAQVRAAGTALGQALRATVLAVKGAALGYPSSPAIQEMVQ
490 500 510 520 530 540
550 560
pF1KB9 CVTELAGQALQFTTLLTSLAP
:::::::::::::::::::::
CCDS95 CVTELAGQALQFTTLLTSLAP
550 560
>>CCDS9596.1 EFS gene_id:10278|Hs108|chr14 (468 aa)
initn: 3218 init1: 3218 opt: 3218 Z-score: 1426.3 bits: 273.5 E(32554): 4e-73
Smith-Waterman score: 3218; 100.0% identity (100.0% similar) in 462 aa overlap (100-561:7-468)
70 80 90 100 110 120
pF1KB9 PAPKPSLSPASPAQPGSPYPAPDHSNEDQEVYVVPPPARPCPTSGPPAGPCPPSPDLIYK
::::::::::::::::::::::::::::::
CCDS95 MAIATSVYVVPPPARPCPTSGPPAGPCPPSPDLIYK
10 20 30
130 140 150 160 170 180
pF1KB9 IPRASGTQLAAPRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAPQPPGEDDAPYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 IPRASGTQLAAPRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAPQPPGEDDAPYD
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 VPLTPKPPAELEPDLEWEGGREPGPPIYAAPSNLKRASALLNLYEAPEELLADGEGGGTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 VPLTPKPPAELEPDLEWEGGREPGPPIYAAPSNLKRASALLNLYEAPEELLADGEGGGTD
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB9 EGIYDVPLLGPEAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 EGIYDVPLLGPEAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPA
160 170 180 190 200 210
310 320 330 340 350 360
pF1KB9 LPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEGREMEDDPAGHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 LPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEGREMEDDPAGHH
220 230 240 250 260 270
370 380 390 400 410 420
pF1KB9 NEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQACTGDPELPERGMPAPQEALSPGEPLVVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 NEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQACTGDPELPERGMPAPQEALSPGEPLVVS
280 290 300 310 320 330
430 440 450 460 470 480
pF1KB9 TGDLQLLYFYAGQCQSHYSALQAAVAALMSSTQANQPPRLFVPHSKRVVVAAHRLVFVGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 TGDLQLLYFYAGQCQSHYSALQAAVAALMSSTQANQPPRLFVPHSKRVVVAAHRLVFVGD
340 350 360 370 380 390
490 500 510 520 530 540
pF1KB9 TLGRLAASAPLRAQVRAAGTALGQALRATVLAVKGAALGYPSSPAIQEMVQCVTELAGQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 TLGRLAASAPLRAQVRAAGTALGQALRATVLAVKGAALGYPSSPAIQEMVQCVTELAGQA
400 410 420 430 440 450
550 560
pF1KB9 LQFTTLLTSLAP
::::::::::::
CCDS95 LQFTTLLTSLAP
460
>>CCDS61404.1 EFS gene_id:10278|Hs108|chr14 (392 aa)
initn: 2115 init1: 2056 opt: 2090 Z-score: 936.4 bits: 182.6 E(32554): 7.8e-46
Smith-Waterman score: 2526; 83.5% identity (83.5% similar) in 462 aa overlap (100-561:7-392)
70 80 90 100 110 120
pF1KB9 PAPKPSLSPASPAQPGSPYPAPDHSNEDQEVYVVPPPARPCPTSGPPAGPCPPSPDLIYK
::::::::::::::::::::::::::::::
CCDS61 MAIATSVYVVPPPARPCPTSGPPAGPCPPSPDLIYK
10 20 30
130 140 150 160 170 180
pF1KB9 IPRASGTQLAAPRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAPQPPGEDDAPYD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 IPRASGTQLAAPRDALEVYDVPPTALRVPSSGPYDCPASFSHPLTRVAPQPPGEDDAP--
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB9 VPLTPKPPAELEPDLEWEGGREPGPPIYAAPSNLKRASALLNLYEAPEELLADGEGGGTD
CCDS61 ------------------------------------------------------------
250 260 270 280 290 300
pF1KB9 EGIYDVPLLGPEAPPSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPA
::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 --------------PSPEPPGALASHDQDTLAQLLARSPPPPHRPRLPSAESLSRRPLPA
100 110 120 130 140
310 320 330 340 350 360
pF1KB9 LPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEGREMEDDPAGHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 LPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPPRLPGYGGPKVEGDPEGREMEDDPAGHH
150 160 170 180 190 200
370 380 390 400 410 420
pF1KB9 NEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQACTGDPELPERGMPAPQEALSPGEPLVVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 NEYEGIPMAEEYDYVHLKGMDKAQGSRPPDQACTGDPELPERGMPAPQEALSPGEPLVVS
210 220 230 240 250 260
430 440 450 460 470 480
pF1KB9 TGDLQLLYFYAGQCQSHYSALQAAVAALMSSTQANQPPRLFVPHSKRVVVAAHRLVFVGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 TGDLQLLYFYAGQCQSHYSALQAAVAALMSSTQANQPPRLFVPHSKRVVVAAHRLVFVGD
270 280 290 300 310 320
490 500 510 520 530 540
pF1KB9 TLGRLAASAPLRAQVRAAGTALGQALRATVLAVKGAALGYPSSPAIQEMVQCVTELAGQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 TLGRLAASAPLRAQVRAAGTALGQALRATVLAVKGAALGYPSSPAIQEMVQCVTELAGQA
330 340 350 360 370 380
550 560
pF1KB9 LQFTTLLTSLAP
::::::::::::
CCDS61 LQFTTLLTSLAP
390
561 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 15:03:33 2016 done: Sat Nov 5 15:03:34 2016
Total Scan time: 4.730 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]