Result of FASTA (ccds) for
pF1KB9969
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9969, 552 aa
1>>>pF1KB9969 552 - 552 aa - 552 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.1128+/-0.000973; mu= 1.3749+/- 0.058
mean_var=176.8739+/-36.654, 0's: 0 Z-trim(110.3): 32 B-trim: 0 in 0/52
Lambda= 0.096437
statistics sampled from 11525 (11545) to 11525 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.702), E-opt: 0.2 (0.355), width: 16
Scan time: 3.250
The best scores are: opt bits E(32554)
CCDS11775.1 BAIAP2 gene_id:10458|Hs108|chr17 ( 552) 3626 516.8 2.6e-146
CCDS45806.1 BAIAP2 gene_id:10458|Hs108|chr17 ( 534) 3457 493.3 3e-139
CCDS11776.1 BAIAP2 gene_id:10458|Hs108|chr17 ( 520) 3340 477.0 2.3e-134
CCDS11777.1 BAIAP2 gene_id:10458|Hs108|chr17 ( 521) 3340 477.0 2.4e-134
CCDS34687.1 BAIAP2L1 gene_id:55971|Hs108|chr7 ( 511) 904 138.1 2.4e-32
>>CCDS11775.1 BAIAP2 gene_id:10458|Hs108|chr17 (552 aa)
initn: 3626 init1: 3626 opt: 3626 Z-score: 2740.2 bits: 516.8 E(32554): 2.6e-146
Smith-Waterman score: 3626; 100.0% identity (100.0% similar) in 552 aa overlap (1-552:1-552)
10 20 30 40 50 60
pF1KB9 MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAAL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 DGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 LPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 TKMRGWFPFSYTRVLDSDGSDRLHMSLQQGKSSSTGNLLDKDDLAIPPPDYGAASRAFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TKMRGWFPFSYTRVLDSDGSDRLHMSLQQGKSSSTGNLLDKDDLAIPPPDYGAASRAFPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 QTASGFKQRPYSVAVPAFSQGLDDYGARSMSRNPFAHVQLKPTVTNDRCDLSAQGPEGRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QTASGFKQRPYSVAVPAFSQGLDDYGARSMSRNPFAHVQLKPTVTNDRCDLSAQGPEGRE
490 500 510 520 530 540
550
pF1KB9 HGDGSARTLAGR
::::::::::::
CCDS11 HGDGSARTLAGR
550
>>CCDS45806.1 BAIAP2 gene_id:10458|Hs108|chr17 (534 aa)
initn: 3457 init1: 3457 opt: 3457 Z-score: 2613.4 bits: 493.3 E(32554): 3e-139
Smith-Waterman score: 3457; 100.0% identity (100.0% similar) in 528 aa overlap (1-528:1-528)
10 20 30 40 50 60
pF1KB9 MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAAL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 DGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 LPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 TKMRGWFPFSYTRVLDSDGSDRLHMSLQQGKSSSTGNLLDKDDLAIPPPDYGAASRAFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TKMRGWFPFSYTRVLDSDGSDRLHMSLQQGKSSSTGNLLDKDDLAIPPPDYGAASRAFPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 QTASGFKQRPYSVAVPAFSQGLDDYGARSMSRNPFAHVQLKPTVTNDRCDLSAQGPEGRE
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QTASGFKQRPYSVAVPAFSQGLDDYGARSMSRNPFAHVQLKPTVTNDRSAPLLS
490 500 510 520 530
550
pF1KB9 HGDGSARTLAGR
>>CCDS11776.1 BAIAP2 gene_id:10458|Hs108|chr17 (520 aa)
initn: 3340 init1: 3340 opt: 3340 Z-score: 2525.6 bits: 477.0 E(32554): 2.3e-134
Smith-Waterman score: 3340; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KB9 MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAAL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 DGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 LPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 TKMRGWFPFSYTRVLDSDGSDRLHMSLQQGKSSSTGNLLDKDDLAIPPPDYGAASRAFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TKMRGWFPFSYTRVLDSDGSDRLHMSLQQGKSSSTGNLLDKDDLAIPPPDYGAASRAFPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 QTASGFKQRPYSVAVPAFSQGLDDYGARSMSRNPFAHVQLKPTVTNDRCDLSAQGPEGRE
:::::::::::::::::::::::::::::::
CCDS11 QTASGFKQRPYSVAVPAFSQGLDDYGARSMSSADVEVARF
490 500 510 520
550
pF1KB9 HGDGSARTLAGR
>>CCDS11777.1 BAIAP2 gene_id:10458|Hs108|chr17 (521 aa)
initn: 3340 init1: 3340 opt: 3340 Z-score: 2525.6 bits: 477.0 E(32554): 2.4e-134
Smith-Waterman score: 3340; 100.0% identity (100.0% similar) in 511 aa overlap (1-511:1-511)
10 20 30 40 50 60
pF1KB9 MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSLSRSEEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 ELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAAL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYVS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 DGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPERA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIMN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 GVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSNTLPVRKSVTPKNSYATTENKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 LPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 TKMRGWFPFSYTRVLDSDGSDRLHMSLQQGKSSSTGNLLDKDDLAIPPPDYGAASRAFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TKMRGWFPFSYTRVLDSDGSDRLHMSLQQGKSSSTGNLLDKDDLAIPPPDYGAASRAFPA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KB9 QTASGFKQRPYSVAVPAFSQGLDDYGARSMSRNPFAHVQLKPTVTNDRCDLSAQGPEGRE
:::::::::::::::::::::::::::::::
CCDS11 QTASGFKQRPYSVAVPAFSQGLDDYGARSMSSGSGTLVSTV
490 500 510 520
550
pF1KB9 HGDGSARTLAGR
>>CCDS34687.1 BAIAP2L1 gene_id:55971|Hs108|chr7 (511 aa)
initn: 1358 init1: 866 opt: 904 Z-score: 694.0 bits: 138.1 E(32554): 2.4e-32
Smith-Waterman score: 1306; 40.6% identity (71.4% similar) in 542 aa overlap (3-528:1-505)
10 20 30 40 50
pF1KB9 MSLSRS-EEMHRLTENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKM
.::. ::..::::..:...::::::.:::.: .:::::::. .. :.:.:.:...:.
CCDS34 MSRGPEEVNRLTESTYRNVMEQFNPGLRNLINLGKNYEKAVNAMILAGKAYYDGVAKI
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 GELASESQGSKELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAA
::.:. : : ::: ::.... .:......:.: .:.::.:.. .::.:.::: .:..:.
CCDS34 GEIATGSPVSTELGHVLIEISSTHKKLNESLDENFKKFHKEIIHELEKKIELDVKYMNAT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 LKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQGELENYV
::.::::...: ..:.: ::::::.:.:::::.: :: ::..:.......:.:.....
CCDS34 LKRYQTEHKNKLESLEKSQAELKKIRRKSQGSRNALKYEHKEIEYVETVTSRQSEIQKFI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 SDGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQQACADPSKIPER
.:: : :: ::.:::::::.:.:. :.. :: .. ::: .::: ::..:.: :.::.
CCDS34 ADGCKEALLEEKRRFCFLVDKHCGFANHIHYYHLQSAELLNSKLPRWQETCVDAIKVPEK
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 AVQLMQQVASNGATLPSALSASKSNLVISDPIPGAKPLPVPPELAPFVGRMSAQESTPIM
....... . :. : :. :. :. .:.. : .. .
CCDS34 IMNMIEEIKT-----PA-----------STPVSGT------PQASPMIERSNVVR-----
240 250 260 270
300 310 320 330 340 350
pF1KB9 NGVTGPDGEDYSPWADRKAAQPKSLSPPQSQSKLSDSYSN-TLPVRKSVTPKNSYATTEN
.::. . . .: . : : : : ..: . . .: .:: .:.:.
CCDS34 --------KDYDTLSKCSPKMPPAPSGRAYTSPLIDMFNNPATAAPNSQRVNNSTGTSED
280 290 300 310 320
360 370 380 390 400 410
pF1KB9 KTLPRSSSMAAGLERNGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGES
.: :: :.:.::. ...::.:: :.::.:.::::: .::.::::.:: .::: :::
CCDS34 PSLQRSVSVATGLNMMKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEH
330 340 350 360 370 380
420 430 440 450 460 470
pF1KB9 EKTKMRGWFPFSYTRVLDSDGSDRLHMSLQQG---KSSSTGNLLDKDDLAIPPPDY----
. .: ::::: :::..:. . .. . . . .: :: :: ......::::::
CCDS34 DVSKARGWFPSSYTKLLEENETEAVTVPTPSPTPVRSISTVNLSENSSVVIPPPDYLECL
390 400 410 420 430 440
480 490 500 510 520
pF1KB9 --GAAS--RAFPAQTASGFK---QRPYSVAVPAFSQGLDDYGARSMSRNPFAHVQLKPTV
:::. :: :.:.: :: ..: . :.: ..: : ..:::: :.:.:::
CCDS34 SMGAAADRRADSARTTSTFKAPASKPET-AAPNDANGTAKPPFLS-GENPFATVKLRPTV
450 460 470 480 490 500
530 540 550
pF1KB9 TNDRCDLSAQGPEGREHGDGSARTLAGR
::::
CCDS34 TNDRSAPIIR
510
552 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 09:08:13 2016 done: Fri Nov 4 09:08:13 2016
Total Scan time: 3.250 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]