Result of FASTA (omim) for
pF1KB9844
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9844, 372 aa
1>>>pF1KB9844 372 - 372 aa - 372 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3152+/-0.000436; mu= 3.9453+/- 0.027
mean_var=328.9981+/-73.654, 0's: 0 Z-trim(119.4): 1609 B-trim: 0 in 0/54
Lambda= 0.070709
statistics sampled from 31415 (33483) to 31415 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.393), width: 16
Scan time: 9.180
The best scores are: opt bits E(85289)
NP_996806 (OMIM: 300570) transcription factor YY2 ( 372) 2559 274.9 2.1e-73
NP_003394 (OMIM: 600013) transcriptional repressor ( 414) 1195 135.8 1.7e-31
XP_011529907 (OMIM: 614572) PREDICTED: zinc finger ( 310) 849 100.3 6.1e-21
NP_777560 (OMIM: 614572) zinc finger protein 42 ho ( 310) 849 100.3 6.1e-21
XP_011529906 (OMIM: 614572) PREDICTED: zinc finger ( 310) 849 100.3 6.1e-21
NP_001291287 (OMIM: 614572) zinc finger protein 42 ( 310) 849 100.3 6.1e-21
XP_011529909 (OMIM: 614572) PREDICTED: zinc finger ( 310) 849 100.3 6.1e-21
XP_011529908 (OMIM: 614572) PREDICTED: zinc finger ( 310) 849 100.3 6.1e-21
XP_016866746 (OMIM: 194549) PREDICTED: zinc finger ( 462) 369 51.6 4.3e-06
NP_001278961 (OMIM: 194549) zinc finger protein 76 ( 515) 369 51.7 4.6e-06
XP_016866745 (OMIM: 194549) PREDICTED: zinc finger ( 515) 369 51.7 4.6e-06
XP_016866744 (OMIM: 194549) PREDICTED: zinc finger ( 517) 369 51.7 4.6e-06
XP_011513158 (OMIM: 194549) PREDICTED: zinc finger ( 519) 369 51.7 4.6e-06
XP_016866743 (OMIM: 194549) PREDICTED: zinc finger ( 524) 369 51.7 4.6e-06
XP_016866742 (OMIM: 194549) PREDICTED: zinc finger ( 524) 369 51.7 4.6e-06
XP_011513157 (OMIM: 194549) PREDICTED: zinc finger ( 526) 369 51.7 4.6e-06
XP_011513156 (OMIM: 194549) PREDICTED: zinc finger ( 526) 369 51.7 4.6e-06
XP_016866741 (OMIM: 194549) PREDICTED: zinc finger ( 527) 369 51.7 4.6e-06
XP_016866740 (OMIM: 194549) PREDICTED: zinc finger ( 536) 369 51.7 4.7e-06
NP_003418 (OMIM: 194549) zinc finger protein 76 is ( 570) 369 51.7 4.8e-06
XP_016866738 (OMIM: 194549) PREDICTED: zinc finger ( 570) 369 51.7 4.8e-06
XP_011513152 (OMIM: 194549) PREDICTED: zinc finger ( 579) 369 51.7 4.9e-06
XP_011513151 (OMIM: 194549) PREDICTED: zinc finger ( 579) 369 51.7 4.9e-06
XP_016866737 (OMIM: 194549) PREDICTED: zinc finger ( 582) 369 51.7 4.9e-06
XP_011513149 (OMIM: 194549) PREDICTED: zinc finger ( 591) 369 51.8 4.9e-06
XP_011513148 (OMIM: 194549) PREDICTED: zinc finger ( 591) 369 51.8 4.9e-06
XP_016866739 (OMIM: 194549) PREDICTED: zinc finger ( 561) 367 51.5 5.5e-06
XP_005259428 (OMIM: 610671) PREDICTED: zinc finger (1055) 372 52.4 5.6e-06
NP_149104 (OMIM: 610671) zinc finger protein 628 [ (1059) 372 52.4 5.6e-06
NP_008894 (OMIM: 194529) zinc finger protein 22 [H ( 224) 355 49.7 7.5e-06
NP_001311068 (OMIM: 314995) zinc finger protein 41 ( 693) 362 51.1 8.9e-06
NP_001311074 (OMIM: 314995) zinc finger protein 41 ( 693) 362 51.1 8.9e-06
NP_001311078 (OMIM: 314995) zinc finger protein 41 ( 693) 362 51.1 8.9e-06
NP_001311072 (OMIM: 314995) zinc finger protein 41 ( 693) 362 51.1 8.9e-06
NP_001311081 (OMIM: 314995) zinc finger protein 41 ( 693) 362 51.1 8.9e-06
NP_001311070 (OMIM: 314995) zinc finger protein 41 ( 693) 362 51.1 8.9e-06
NP_001311086 (OMIM: 314995) zinc finger protein 41 ( 743) 362 51.2 9.3e-06
NP_001311085 (OMIM: 314995) zinc finger protein 41 ( 745) 362 51.2 9.3e-06
XP_011539795 (OMIM: 600172) PREDICTED: metal regul ( 595) 360 50.8 9.4e-06
NP_001311073 (OMIM: 314995) zinc finger protein 41 ( 779) 362 51.2 9.5e-06
XP_016885306 (OMIM: 314995) PREDICTED: zinc finger ( 779) 362 51.2 9.5e-06
NP_009061 (OMIM: 314995) zinc finger protein 41 is ( 779) 362 51.2 9.5e-06
NP_700359 (OMIM: 314995) zinc finger protein 41 is ( 779) 362 51.2 9.5e-06
NP_001311079 (OMIM: 314995) zinc finger protein 41 ( 779) 362 51.2 9.5e-06
NP_001311076 (OMIM: 314995) zinc finger protein 41 ( 779) 362 51.2 9.5e-06
NP_001311069 (OMIM: 314995) zinc finger protein 41 ( 779) 362 51.2 9.5e-06
NP_001311071 (OMIM: 314995) zinc finger protein 41 ( 781) 362 51.2 9.5e-06
NP_001311077 (OMIM: 314995) zinc finger protein 41 ( 781) 362 51.2 9.5e-06
XP_006724618 (OMIM: 314995) PREDICTED: zinc finger ( 789) 362 51.2 9.6e-06
NP_001311080 (OMIM: 314995) zinc finger protein 41 ( 789) 362 51.2 9.6e-06
>>NP_996806 (OMIM: 300570) transcription factor YY2 [Hom (372 aa)
initn: 2559 init1: 2559 opt: 2559 Z-score: 1438.8 bits: 274.9 E(85289): 2.1e-73
Smith-Waterman score: 2559; 100.0% identity (100.0% similar) in 372 aa overlap (1-372:1-372)
10 20 30 40 50 60
pF1KB9 MASNEDFSITQDLEIPADIVELHDINVEPLPMEDIPTESVQYEDVDGNWIYGGHNHPPLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 MASNEDFSITQDLEIPADIVELHDINVEPLPMEDIPTESVQYEDVDGNWIYGGHNHPPLM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 VLQPLFTNTGYGDHDQEMLMLQTQEEVVGYCDSDNQLGNDLEDQLALPDSIEDEHFQMTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 VLQPLFTNTGYGDHDQEMLMLQTQEEVVGYCDSDNQLGNDLEDQLALPDSIEDEHFQMTL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 ASLSASAASTSTSTQSRSKKPSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 ASLSASAASTSTSTQSRSKKPSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 GEFSVTMWSPNDNNDQGAVGEGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 GEFSVTMWSPNDNNDQGAVGEGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 VKPKRSKGEPPKTVPCSYSGCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 VKPKRSKGEPPKTVPCSYSGCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKT
310 320 330 340 350 360
370
pF1KB9 HILTHVKTKNNP
::::::::::::
NP_996 HILTHVKTKNNP
370
>>NP_003394 (OMIM: 600013) transcriptional repressor pro (414 aa)
initn: 1137 init1: 769 opt: 1195 Z-score: 686.3 bits: 135.8 E(85289): 1.7e-31
Smith-Waterman score: 1419; 56.8% identity (76.7% similar) in 403 aa overlap (10-371:11-413)
10 20 30 40 50
pF1KB9 MASNEDFSITQDLEIPADIVELHDINVEPLPMEDIPTESV---QYEDVD----GNWIYG
:. :.::.:::::.:.:: .:.: : : : . :: : :. .:
NP_003 MASGDTLYIATDGSEMPAEIVELHEIEVETIPVETIETTVVGEEEEEDDDDEDGGGGDHG
10 20 30 40 50 60
60 70 80 90
pF1KB9 G----------------HNHPPLMVLQPLFTNTGYG-DHDQEMLMLQTQEEVVGYCDSDN
: :.:::...:::: :. : ::....::.::::: :::.
NP_003 GGGGHGHAGHHHHHHHHHHHPPMIALQPLVTDDPTQVHHHQEVILVQTREEVVGGDDSDG
70 80 90 100 110 120
100 110 120 130 140
pF1KB9 QLGND-LEDQLALPDSI----EDEHFQMTLASLSASAAS----TSTSTQSRSKKPSKKPS
..: .:::. .: .:.....::....:.. : .:.: .: :: . : :
NP_003 LRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTVAAAGKSGGGGSSSSGGGRVKKGGGKKS
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB9 GK-SATSTEANPAGSSSSL-GTRKWEQKQMQVKTLEGEFSVTMWSPNDNND--QGAVGEG
:: : : :. ::.... :..::::::.:.::::::::::::: ....: . .: :
NP_003 GKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDEKKDIDHETVVEE
190 200 210 220 230 240
210 220 230 240 250
pF1KB9 Q--AEN-PPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSK-GEPPKTVPCSY
: .:: :::::::. ::::::::.::::::::::::::...::.. : . :.:. : .
NP_003 QIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDAPRTIACPH
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB9 SGCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGC
.:: ::::: .::::::: :::::::::::::::.:::::.:::::::::::::::::::
NP_003 KGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB9 GKRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
:::::::::::::.::::::.:.::::: ::.:::::::::.:::::.:.:::
NP_003 GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
370 380 390 400 410
>>XP_011529907 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 1051 init1: 633 opt: 849 Z-score: 496.9 bits: 100.3 E(85289): 6.1e-21
Smith-Waterman score: 849; 62.4% identity (80.2% similar) in 202 aa overlap (171-371:108-305)
150 160 170 180 190 200
pF1KB9 PSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVG
:: .....:: . . . . : ::
XP_011 RGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSLEYMKKGVKKELPQKIVG
80 90 100 110 120 130
210 220 230 240 250
pF1KB9 EGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKG-EPPKTVPCSYS
: : .::::. ::::::::.::::::::::::::.. :: .: . ... : :
XP_011 E----NSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEYDSLSAIACPQS
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB9 GCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCG
:: . .:. ::.:::: ::::: ::::::::::.:::::.:: :::::::::.:::::::
XP_011 GCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCG
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB9 KRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
::::::::::::.:::::.: :::::. :::.: ::.:::.:::::..:..:
XP_011 KRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
260 270 280 290 300 310
>>NP_777560 (OMIM: 614572) zinc finger protein 42 homolo (310 aa)
initn: 1051 init1: 633 opt: 849 Z-score: 496.9 bits: 100.3 E(85289): 6.1e-21
Smith-Waterman score: 849; 62.4% identity (80.2% similar) in 202 aa overlap (171-371:108-305)
150 160 170 180 190 200
pF1KB9 PSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVG
:: .....:: . . . . : ::
NP_777 RGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSLEYMKKGVKKELPQKIVG
80 90 100 110 120 130
210 220 230 240 250
pF1KB9 EGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKG-EPPKTVPCSYS
: : .::::. ::::::::.::::::::::::::.. :: .: . ... : :
NP_777 E----NSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEYDSLSAIACPQS
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB9 GCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCG
:: . .:. ::.:::: ::::: ::::::::::.:::::.:: :::::::::.:::::::
NP_777 GCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCG
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB9 KRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
::::::::::::.:::::.: :::::. :::.: ::.:::.:::::..:..:
NP_777 KRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
260 270 280 290 300 310
>>XP_011529906 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 1051 init1: 633 opt: 849 Z-score: 496.9 bits: 100.3 E(85289): 6.1e-21
Smith-Waterman score: 849; 62.4% identity (80.2% similar) in 202 aa overlap (171-371:108-305)
150 160 170 180 190 200
pF1KB9 PSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVG
:: .....:: . . . . : ::
XP_011 RGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSLEYMKKGVKKELPQKIVG
80 90 100 110 120 130
210 220 230 240 250
pF1KB9 EGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKG-EPPKTVPCSYS
: : .::::. ::::::::.::::::::::::::.. :: .: . ... : :
XP_011 E----NSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEYDSLSAIACPQS
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB9 GCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCG
:: . .:. ::.:::: ::::: ::::::::::.:::::.:: :::::::::.:::::::
XP_011 GCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCG
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB9 KRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
::::::::::::.:::::.: :::::. :::.: ::.:::.:::::..:..:
XP_011 KRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
260 270 280 290 300 310
>>NP_001291287 (OMIM: 614572) zinc finger protein 42 hom (310 aa)
initn: 1051 init1: 633 opt: 849 Z-score: 496.9 bits: 100.3 E(85289): 6.1e-21
Smith-Waterman score: 849; 62.4% identity (80.2% similar) in 202 aa overlap (171-371:108-305)
150 160 170 180 190 200
pF1KB9 PSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVG
:: .....:: . . . . : ::
NP_001 RGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSLEYMKKGVKKELPQKIVG
80 90 100 110 120 130
210 220 230 240 250
pF1KB9 EGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKG-EPPKTVPCSYS
: : .::::. ::::::::.::::::::::::::.. :: .: . ... : :
NP_001 E----NSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEYDSLSAIACPQS
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB9 GCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCG
:: . .:. ::.:::: ::::: ::::::::::.:::::.:: :::::::::.:::::::
NP_001 GCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCG
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB9 KRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
::::::::::::.:::::.: :::::. :::.: ::.:::.:::::..:..:
NP_001 KRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
260 270 280 290 300 310
>>XP_011529909 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 1051 init1: 633 opt: 849 Z-score: 496.9 bits: 100.3 E(85289): 6.1e-21
Smith-Waterman score: 849; 62.4% identity (80.2% similar) in 202 aa overlap (171-371:108-305)
150 160 170 180 190 200
pF1KB9 PSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVG
:: .....:: . . . . : ::
XP_011 RGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSLEYMKKGVKKELPQKIVG
80 90 100 110 120 130
210 220 230 240 250
pF1KB9 EGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKG-EPPKTVPCSYS
: : .::::. ::::::::.::::::::::::::.. :: .: . ... : :
XP_011 E----NSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEYDSLSAIACPQS
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB9 GCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCG
:: . .:. ::.:::: ::::: ::::::::::.:::::.:: :::::::::.:::::::
XP_011 GCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCG
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB9 KRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
::::::::::::.:::::.: :::::. :::.: ::.:::.:::::..:..:
XP_011 KRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
260 270 280 290 300 310
>>XP_011529908 (OMIM: 614572) PREDICTED: zinc finger pro (310 aa)
initn: 1051 init1: 633 opt: 849 Z-score: 496.9 bits: 100.3 E(85289): 6.1e-21
Smith-Waterman score: 849; 62.4% identity (80.2% similar) in 202 aa overlap (171-371:108-305)
150 160 170 180 190 200
pF1KB9 PSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVG
:: .....:: . . . . : ::
XP_011 RGEFSQPILEEDSLFESLEYLKKGSEQQLSQKVFEASSLECSLEYMKKGVKKELPQKIVG
80 90 100 110 120 130
210 220 230 240 250
pF1KB9 EGQAENPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKG-EPPKTVPCSYS
: : .::::. ::::::::.::::::::::::::.. :: .: . ... : :
XP_011 E----NSLEYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARKKPPINKEYDSLSAIACPQS
140 150 160 170 180 190
260 270 280 290 300 310
pF1KB9 GCEKMFRDYAAMRKHLHIHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCG
:: . .:. ::.:::: ::::: ::::::::::.:::::.:: :::::::::.:::::::
XP_011 GCTRKLRNRAALRKHLLIHGPRDHVCAECGKAFVESSKLKRHFLVHTGEKPFRCTFEGCG
200 210 220 230 240 250
320 330 340 350 360 370
pF1KB9 KRFSLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
::::::::::::.:::::.: :::::. :::.: ::.:::.:::::..:..:
XP_011 KRFSLDFNLRTHVRIHTGEKRFVCPFQGCNRRFIQSNNLKAHILTHANTNKNEQEGK
260 270 280 290 300 310
>>XP_016866746 (OMIM: 194549) PREDICTED: zinc finger pro (462 aa)
initn: 562 init1: 289 opt: 369 Z-score: 230.4 bits: 51.6 E(85289): 4.3e-06
Smith-Waterman score: 369; 38.0% identity (65.7% similar) in 137 aa overlap (236-369:126-260)
210 220 230 240 250 260
pF1KB9 NPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKGEPPKTVPCSYSGCEKMF
:. ::. . :. : :.. .: : :
XP_016 SQIPRNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYR--CDFPSCGKAF
100 110 120 130 140 150
270 280 290 300 310 320
pF1KB9 RDYAAMRKHLHIH-GPRVHVCAE--CGKAFLESSKLRRHQLVHTGEKPFQCTFEGCGKRF
....:.. : : . . : : :.::: :. :..: .::::.:::: :::::. :
XP_016 ATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSF
160 170 180 190 200 210
330 340 350 360 370
pF1KB9 SLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
. . ..:.: :::..:..:: :.: :...:: :.:. :. :
XP_016 TTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRF
220 230 240 250 260 270
XP_016 TEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQ
280 290 300 310 320 330
>>NP_001278961 (OMIM: 194549) zinc finger protein 76 iso (515 aa)
initn: 562 init1: 289 opt: 369 Z-score: 229.9 bits: 51.7 E(85289): 4.6e-06
Smith-Waterman score: 369; 38.0% identity (65.7% similar) in 137 aa overlap (236-369:179-313)
210 220 230 240 250 260
pF1KB9 NPPDYSEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKGEPPKTVPCSYSGCEKMF
:. ::. . :. : :.. .: : :
NP_001 SQIPRNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYR--CDFPSCGKAF
150 160 170 180 190 200
270 280 290 300 310 320
pF1KB9 RDYAAMRKHLHIH-GPRVHVCAE--CGKAFLESSKLRRHQLVHTGEKPFQCTFEGCGKRF
....:.. : : . . : : :.::: :. :..: .::::.:::: :::::. :
NP_001 ATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSF
210 220 230 240 250 260
330 340 350 360 370
pF1KB9 SLDFNLRTHLRIHTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP
. . ..:.: :::..:..:: :.: :...:: :.:. :. :
NP_001 TTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRF
270 280 290 300 310 320
NP_001 TEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQ
330 340 350 360 370 380
372 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:41:29 2016 done: Fri Nov 4 19:41:30 2016
Total Scan time: 9.180 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]