Result of FASTA (omim) for
pF1KB9837
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9837, 352 aa
1>>>pF1KB9837 352 - 352 aa - 352 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.5593+/-0.00053; mu= 21.2794+/- 0.033
mean_var=121.1827+/-30.874, 0's: 0 Z-trim(108.9): 600 B-trim: 991 in 1/48
Lambda= 0.116508
statistics sampled from 16295 (17029) to 16295 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.524), E-opt: 0.2 (0.2), width: 16
Scan time: 7.550
The best scores are: opt bits E(85289)
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 2345 406.2 5.7e-113
NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 2345 406.2 5.7e-113
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 1745 305.3 1.3e-82
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 1745 305.3 1.3e-82
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 1569 275.8 1.1e-73
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 1367 241.8 1.8e-63
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 1230 218.8 1.5e-56
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 1230 218.8 1.5e-56
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 1230 218.8 1.5e-56
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 1230 218.8 1.5e-56
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 1230 218.8 1.5e-56
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 1230 218.8 1.5e-56
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 1230 218.9 1.6e-56
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 1230 218.9 1.6e-56
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 1206 214.7 2.5e-55
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 1206 214.7 2.5e-55
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 1000 180.1 6.5e-45
NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 892 161.9 1.9e-39
NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 892 161.9 1.9e-39
NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 892 161.9 1.9e-39
NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387) 892 162.0 2e-39
XP_011532511 (OMIM: 608379) PREDICTED: C-C chemoki ( 344) 871 158.4 2.2e-38
XP_011532510 (OMIM: 608379) PREDICTED: C-C chemoki ( 344) 871 158.4 2.2e-38
NP_003956 (OMIM: 608379) C-C chemokine receptor-li ( 344) 871 158.4 2.2e-38
XP_016862925 (OMIM: 608379) PREDICTED: C-C chemoki ( 344) 871 158.4 2.2e-38
NP_001124382 (OMIM: 608379) C-C chemokine receptor ( 356) 871 158.4 2.2e-38
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 791 145.0 2.5e-34
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 791 145.0 2.5e-34
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 791 145.0 2.5e-34
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 791 145.0 2.5e-34
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 766 140.8 4.7e-33
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 762 140.1 7.4e-33
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 762 140.1 7.4e-33
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 762 140.1 7.4e-33
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 762 140.1 7.4e-33
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 736 135.8 1.5e-31
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 736 135.8 1.5e-31
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 716 132.3 1.4e-30
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 701 129.8 8.8e-30
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 701 129.8 8.8e-30
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 701 129.8 8.8e-30
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 701 129.8 8.8e-30
NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 701 129.8 8.8e-30
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 701 129.8 8.8e-30
NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 683 126.8 7.3e-29
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 683 126.9 7.4e-29
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 683 126.9 7.7e-29
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 683 126.9 7.7e-29
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 679 126.1 1.1e-28
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 679 126.1 1.1e-28
>>NP_001093638 (OMIM: 601373,609532,610379,612522) C-C c (352 aa)
initn: 2345 init1: 2345 opt: 2345 Z-score: 2149.2 bits: 406.2 E(85289): 5.7e-113
Smith-Waterman score: 2345; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352)
10 20 30 40 50 60
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVRLIFTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVRLIFTI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 MIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFV
250 260 270 280 290 300
310 320 330 340 350
pF1KB9 GEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
310 320 330 340 350
>>NP_000570 (OMIM: 601373,609532,610379,612522) C-C chem (352 aa)
initn: 2345 init1: 2345 opt: 2345 Z-score: 2149.2 bits: 406.2 E(85289): 5.7e-113
Smith-Waterman score: 2345; 100.0% identity (100.0% similar) in 352 aa overlap (1-352:1-352)
10 20 30 40 50 60
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 LKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 LLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 HFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVRLIFTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 HFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVRLIFTI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 MIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFV
250 260 270 280 290 300
310 320 330 340 350
pF1KB9 GEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
310 320 330 340 350
>>NP_001116868 (OMIM: 601267) C-C chemokine receptor typ (360 aa)
initn: 890 init1: 890 opt: 1745 Z-score: 1604.0 bits: 305.3 E(85289): 1.3e-82
Smith-Waterman score: 1745; 74.9% identity (90.2% similar) in 346 aa overlap (7-352:21-360)
10 20 30 40
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFV
. ..: .: . ::.:..::::.:.:::::::::::::::
NP_001 MLSTSRSRFIRNTNESGEEVTTFFDYDY--GAPCHKFDVKQIGAQLLPPLYSLVFIFGFV
10 20 30 40 50
50 60 70 80 90 100
pF1KB9 GNMLVILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTG
:::::.:::::::.:: .:::::::::::::.::.:.:.::: :: .: :::.::.:.::
NP_001 GNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFTG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB9 LYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIF
:: ::.:.:::::::::::::::.:::::::::::::::::::::::.::::::.:::::
NP_001 LYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIF
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 TRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRN
:. ::: :.:. .:: . :.::.:. :::::::::.:::::::::::::::::
NP_001 TKCQKEDSVYVCGPYFPRG----WNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRN
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 EKKRHRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLG
:::::::::.::::::::::::.:::::.:::::::::::.:: :...:::: :::::::
NP_001 EKKRHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLG
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB9 MTHCCINPIIYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQ
::::::::::::::::::: :: :::.:::.::::: : .: .:. . ..:. : :::::
NP_001 MTHCCINPIIYAFVGEKFRRYLSVFFRKHITKRFCKQCPVFYRETVDGVTSTNTPSTGEQ
300 310 320 330 340 350
350
pF1KB9 EISVGL
:.:.::
NP_001 EVSAGL
360
>>XP_011532371 (OMIM: 601267) PREDICTED: C-C chemokine r (360 aa)
initn: 890 init1: 890 opt: 1745 Z-score: 1604.0 bits: 305.3 E(85289): 1.3e-82
Smith-Waterman score: 1745; 74.9% identity (90.2% similar) in 346 aa overlap (7-352:21-360)
10 20 30 40
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFV
. ..: .: . ::.:..::::.:.:::::::::::::::
XP_011 MLSTSRSRFIRNTNESGEEVTTFFDYDY--GAPCHKFDVKQIGAQLLPPLYSLVFIFGFV
10 20 30 40 50
50 60 70 80 90 100
pF1KB9 GNMLVILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTG
:::::.:::::::.:: .:::::::::::::.::.:.:.::: :: .: :::.::.:.::
XP_011 GNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFTG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB9 LYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIF
:: ::.:.:::::::::::::::.:::::::::::::::::::::::.::::::.:::::
XP_011 LYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIF
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 TRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRN
:. ::: :.:. .:: . :.::.:. :::::::::.:::::::::::::::::
XP_011 TKCQKEDSVYVCGPYFPRG----WNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRN
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 EKKRHRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLG
:::::::::.::::::::::::.:::::.:::::::::::.:: :...:::: :::::::
XP_011 EKKRHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLG
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB9 MTHCCINPIIYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQ
::::::::::::::::::: :: :::.:::.::::: : .: .:. . ..:. : :::::
XP_011 MTHCCINPIIYAFVGEKFRRYLSVFFRKHITKRFCKQCPVFYRETVDGVTSTNTPSTGEQ
300 310 320 330 340 350
350
pF1KB9 EISVGL
:.:.::
XP_011 EVSAGL
360
>>NP_001116513 (OMIM: 601267) C-C chemokine receptor typ (374 aa)
initn: 890 init1: 890 opt: 1569 Z-score: 1444.0 bits: 275.8 E(85289): 1.1e-73
Smith-Waterman score: 1569; 75.2% identity (90.4% similar) in 311 aa overlap (7-317:21-325)
10 20 30 40
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFV
. ..: .: . ::.:..::::.:.:::::::::::::::
NP_001 MLSTSRSRFIRNTNESGEEVTTFFDYDY--GAPCHKFDVKQIGAQLLPPLYSLVFIFGFV
10 20 30 40 50
50 60 70 80 90 100
pF1KB9 GNMLVILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTG
:::::.:::::::.:: .:::::::::::::.::.:.:.::: :: .: :::.::.:.::
NP_001 GNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKLFTG
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB9 LYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIF
:: ::.:.:::::::::::::::.:::::::::::::::::::::::.::::::.:::::
NP_001 LYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPGIIF
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB9 TRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRN
:. ::: :.:. .:: . :.::.:. :::::::::.:::::::::::::::::
NP_001 TKCQKEDSVYVCGPYFPRG----WNNFHTIMRNILGLVLPLLIMVICYSGILKTLLRCRN
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB9 EKKRHRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLG
:::::::::.::::::::::::.:::::.:::::::::::.:: :...:::: :::::::
NP_001 EKKRHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTETLG
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB9 MTHCCINPIIYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQ
:::::::::::::::::::. . . . .::
NP_001 MTHCCINPIIYAFVGEKFRSLFHIALGCRIAPLQKPVCGGPGVRPGKNVKVTTQGLLDGR
300 310 320 330 340 350
350
pF1KB9 EISVGL
NP_001 GKGKSIGRAPEASLQDKEGA
360 370
>>NP_001286 (OMIM: 601159) C-C chemokine receptor type 1 (355 aa)
initn: 635 init1: 635 opt: 1367 Z-score: 1260.7 bits: 241.8 E(85289): 1.8e-63
Smith-Waterman score: 1367; 56.0% identity (85.5% similar) in 352 aa overlap (2-352:9-355)
10 20 30 40 50
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVIL
::.... ...: . ::::.: . ..:.::::::::::..:.:::.::.:
NP_001 METPNTTEDYDTTT---EFDYGDATPCQKVNERAFGAQLLPPLYSLVFVIGLVGNILVVL
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 ILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQ-WDFGNTMCQLLTGLYFIGF
.:.. ::::.::.:::::::::::.::.:.::: : . : ::..::..:.:.:. :.
NP_001 VLVQYKRLKNMTSIYLLNLAISDLLFLFTLPFWIDYKLKDDWVFGDAMCKILSGFYYTGL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KB9 FSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKE
.: ::::::::::::::.:::::::.::::::::.::.: :..:..::.::. :...: :
NP_001 YSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIIIWALAILASMPGLYFSKTQWE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KB9 GLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHR
:.::: :::. . . :: ::.::. ..:::::::::.:::.::.: ::: :::: .
NP_001 FTHHTCSLHFPHESLREWKLFQALKLNLFGLVLPLLVMIICYTGIIKILLRRPNEKKS-K
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB9 AVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCI
::::::.:::..::::.:::...:...::.:. ..: .: .:: :.::::....::::.
NP_001 AVRLIFVIMIIFFLFWTPYNLTILISVFQDFLFTHECEQSRHLDLAVQVTEVIAYTHCCV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 NPIIYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
::.:::::::.::.:: .:....: .. : ... . ::.::. . ::::.:.:.:.
NP_001 NPVIYAFVGERFRKYLRQLFHRRVAVHLVKWLPFLSVDRLERVSST-SPSTGEHELSAGF
300 310 320 330 340 350
>>XP_006713023 (OMIM: 601268) PREDICTED: C-C chemokine r (355 aa)
initn: 570 init1: 570 opt: 1230 Z-score: 1136.2 bits: 218.8 E(85289): 1.5e-56
Smith-Waterman score: 1230; 53.3% identity (83.7% similar) in 332 aa overlap (20-350:24-353)
10 20 30 40 50
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILI
:.: ... . :...:::::::: :..::..:..:::
XP_006 MTTSLDTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNVVVVMILI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 NCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQ-WDFGNTMCQLLTGLYFIGFFSG
. .::. ::.:::::::::::.::.:.::: ::. .. : ::. ::.::.:.: :..:
XP_006 KYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFYHTGLYSE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 IFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLH
::::::::::::::.:::::::.::::::::.::..:: .::.:.:: .:: .... .
XP_006 IFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELFEE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVR
::. .: . :..:.::...:. ::::::::.:::.::.:::::: . ::...:.:
XP_006 TLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPS-KKKYKAIR
190 200 210 220 230
240 250 260 270 280 290
pF1KB9 LIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPI
:::.:: :.:.::.:::...::...: .. :.: :..:: .: :::.....:::.::.
XP_006 LIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNPV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 IYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
:::::::.::.:: ::..:. .. . .. .: ::.::: . ::.: :.:.
XP_006 IYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSV-SPSTAEPELSIVF
300 310 320 330 340 350
>>NP_001828 (OMIM: 601268) C-C chemokine receptor type 3 (355 aa)
initn: 570 init1: 570 opt: 1230 Z-score: 1136.2 bits: 218.8 E(85289): 1.5e-56
Smith-Waterman score: 1230; 53.3% identity (83.7% similar) in 332 aa overlap (20-350:24-353)
10 20 30 40 50
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILI
:.: ... . :...:::::::: :..::..:..:::
NP_001 MTTSLDTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNVVVVMILI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 NCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQ-WDFGNTMCQLLTGLYFIGFFSG
. .::. ::.:::::::::::.::.:.::: ::. .. : ::. ::.::.:.: :..:
NP_001 KYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFYHTGLYSE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 IFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLH
::::::::::::::.:::::::.::::::::.::..:: .::.:.:: .:: .... .
NP_001 IFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELFEE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVR
::. .: . :..:.::...:. ::::::::.:::.::.:::::: . ::...:.:
NP_001 TLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPS-KKKYKAIR
190 200 210 220 230
240 250 260 270 280 290
pF1KB9 LIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPI
:::.:: :.:.::.:::...::...: .. :.: :..:: .: :::.....:::.::.
NP_001 LIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNPV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 IYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
:::::::.::.:: ::..:. .. . .. .: ::.::: . ::.: :.:.
NP_001 IYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSV-SPSTAEPELSIVF
300 310 320 330 340 350
>>XP_011531637 (OMIM: 601268) PREDICTED: C-C chemokine r (355 aa)
initn: 570 init1: 570 opt: 1230 Z-score: 1136.2 bits: 218.8 E(85289): 1.5e-56
Smith-Waterman score: 1230; 53.3% identity (83.7% similar) in 332 aa overlap (20-350:24-353)
10 20 30 40 50
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILI
:.: ... . :...:::::::: :..::..:..:::
XP_011 MTTSLDTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNVVVVMILI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 NCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQ-WDFGNTMCQLLTGLYFIGFFSG
. .::. ::.:::::::::::.::.:.::: ::. .. : ::. ::.::.:.: :..:
XP_011 KYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFYHTGLYSE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 IFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLH
::::::::::::::.:::::::.::::::::.::..:: .::.:.:: .:: .... .
XP_011 IFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELFEE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVR
::. .: . :..:.::...:. ::::::::.:::.::.:::::: . ::...:.:
XP_011 TLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPS-KKKYKAIR
190 200 210 220 230
240 250 260 270 280 290
pF1KB9 LIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPI
:::.:: :.:.::.:::...::...: .. :.: :..:: .: :::.....:::.::.
XP_011 LIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNPV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 IYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
:::::::.::.:: ::..:. .. . .. .: ::.::: . ::.: :.:.
XP_011 IYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSV-SPSTAEPELSIVF
300 310 320 330 340 350
>>NP_847899 (OMIM: 601268) C-C chemokine receptor type 3 (355 aa)
initn: 570 init1: 570 opt: 1230 Z-score: 1136.2 bits: 218.8 E(85289): 1.5e-56
Smith-Waterman score: 1230; 53.3% identity (83.7% similar) in 332 aa overlap (20-350:24-353)
10 20 30 40 50
pF1KB9 MDYQVSSPIYDINYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILI
:.: ... . :...:::::::: :..::..:..:::
NP_847 MTTSLDTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNVVVVMILI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 NCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQ-WDFGNTMCQLLTGLYFIGFFSG
. .::. ::.:::::::::::.::.:.::: ::. .. : ::. ::.::.:.: :..:
NP_847 KYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFYHTGLYSE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 IFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLH
::::::::::::::.:::::::.::::::::.::..:: .::.:.:: .:: .... .
NP_847 IFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELFEE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 YTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVR
::. .: . :..:.::...:. ::::::::.:::.::.:::::: . ::...:.:
NP_847 TLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPS-KKKYKAIR
190 200 210 220 230
240 250 260 270 280 290
pF1KB9 LIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPI
:::.:: :.:.::.:::...::...: .. :.: :..:: .: :::.....:::.::.
NP_847 LIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNPV
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 IYAFVGEKFRNYLLVFFQKHIAKRFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL
:::::::.::.:: ::..:. .. . .. .: ::.::: . ::.: :.:.
NP_847 IYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSV-SPSTAEPELSIVF
300 310 320 330 340 350
352 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:37:09 2016 done: Fri Nov 4 19:37:10 2016
Total Scan time: 7.550 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]