Result of FASTA (ccds) for
pF1KB9792
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9792, 210 aa
1>>>pF1KB9792 210 - 210 aa - 210 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.1256+/-0.000863; mu= 7.1321+/- 0.052
mean_var=148.7213+/-28.713, 0's: 0 Z-trim(112.3): 34 B-trim: 45 in 1/53
Lambda= 0.105169
statistics sampled from 13089 (13120) to 13089 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.403), width: 16
Scan time: 2.300
The best scores are: opt bits E(32554)
CCDS9518.1 ING1 gene_id:3621|Hs108|chr13 ( 210) 1444 229.8 9.5e-61
CCDS9515.1 ING1 gene_id:3621|Hs108|chr13 ( 235) 1444 229.8 1e-60
CCDS9516.1 ING1 gene_id:3621|Hs108|chr13 ( 279) 1444 229.9 1.2e-60
CCDS9517.1 ING1 gene_id:3621|Hs108|chr13 ( 422) 1444 230.1 1.6e-60
CCDS3833.1 ING2 gene_id:3622|Hs108|chr4 ( 280) 704 117.6 7.5e-27
CCDS44812.1 ING4 gene_id:51147|Hs108|chr12 ( 225) 502 86.9 1.1e-17
CCDS44813.1 ING4 gene_id:51147|Hs108|chr12 ( 249) 502 86.9 1.1e-17
CCDS44814.1 ING4 gene_id:51147|Hs108|chr12 ( 246) 428 75.7 2.7e-14
CCDS44815.1 ING4 gene_id:51147|Hs108|chr12 ( 245) 422 74.8 5.1e-14
CCDS8555.1 ING4 gene_id:51147|Hs108|chr12 ( 248) 422 74.8 5.2e-14
CCDS33425.1 ING5 gene_id:84289|Hs108|chr2 ( 240) 416 73.9 9.5e-14
CCDS5778.1 ING3 gene_id:54556|Hs108|chr7 ( 418) 408 72.9 3.3e-13
CCDS82586.1 ING5 gene_id:84289|Hs108|chr2 ( 226) 351 64.0 8.4e-11
>>CCDS9518.1 ING1 gene_id:3621|Hs108|chr13 (210 aa)
initn: 1444 init1: 1444 opt: 1444 Z-score: 1204.1 bits: 229.8 E(32554): 9.5e-61
Smith-Waterman score: 1444; 100.0% identity (100.0% similar) in 210 aa overlap (1-210:1-210)
10 20 30 40 50 60
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 MLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 GADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 GADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 SKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 SKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKG
130 140 150 160 170 180
190 200 210
pF1KB9 KWYCPKCRGENEKTMDKALEKSKKERAYNR
::::::::::::::::::::::::::::::
CCDS95 KWYCPKCRGENEKTMDKALEKSKKERAYNR
190 200 210
>>CCDS9515.1 ING1 gene_id:3621|Hs108|chr13 (235 aa)
initn: 1444 init1: 1444 opt: 1444 Z-score: 1203.4 bits: 229.8 E(32554): 1e-60
Smith-Waterman score: 1444; 100.0% identity (100.0% similar) in 210 aa overlap (1-210:26-235)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELVENRTR
:::::::::::::::::::::::::::::::::::
CCDS95 MEILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTR
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 QVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 QVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASS
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB9 NHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 NHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB9 GCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 GCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
190 200 210 220 230
>>CCDS9516.1 ING1 gene_id:3621|Hs108|chr13 (279 aa)
initn: 1444 init1: 1444 opt: 1444 Z-score: 1202.4 bits: 229.9 E(32554): 1.2e-60
Smith-Waterman score: 1444; 100.0% identity (100.0% similar) in 210 aa overlap (1-210:70-279)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELV
::::::::::::::::::::::::::::::
CCDS95 IDAKYQEILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB9 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB9 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVS
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB9 YGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 YGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
220 230 240 250 260 270
>>CCDS9517.1 ING1 gene_id:3621|Hs108|chr13 (422 aa)
initn: 1444 init1: 1444 opt: 1444 Z-score: 1200.0 bits: 230.1 E(32554): 1.6e-60
Smith-Waterman score: 1444; 100.0% identity (100.0% similar) in 210 aa overlap (1-210:213-422)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELV
::::::::::::::::::::::::::::::
CCDS95 RAWPWKQILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELV
190 200 210 220 230 240
40 50 60 70 80 90
pF1KB9 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
250 260 270 280 290 300
100 110 120 130 140 150
pF1KB9 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVS
310 320 330 340 350 360
160 170 180 190 200 210
pF1KB9 YGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS95 YGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
370 380 390 400 410 420
>>CCDS3833.1 ING2 gene_id:3622|Hs108|chr4 (280 aa)
initn: 836 init1: 662 opt: 704 Z-score: 595.6 bits: 117.6 E(32554): 7.5e-27
Smith-Waterman score: 849; 62.4% identity (81.7% similar) in 202 aa overlap (5-206:86-277)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELVENRT
.::::: ::::::::::::.::.::::::.
CCDS38 YQETLKEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRA
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB9 RQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENAS
::.. : . : :. ... : :: : ..: .. .:.: ::::..:.:.
CCDS38 RQMELHSQCF---QDPAESERASDKAKMD------SSQPER-SSRRPRRQRTSESRDLCH
120 130 140 150 160
100 110 120 130 140 150
pF1KB9 SNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEM
. .: . :::::.:..::::::::: ::::::... :::::::::::::::::::
CCDS38 MANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEM
170 180 190 200 210 220
160 170 180 190 200 210
pF1KB9 IGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAYNR
:::::..:::::::::::.:..:::::::::::::.:::::::. ::.::.:
CCDS38 IGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDNEKTMDKSTEKTKKDRRSR
230 240 250 260 270 280
>>CCDS44812.1 ING4 gene_id:51147|Hs108|chr12 (225 aa)
initn: 511 init1: 368 opt: 502 Z-score: 431.2 bits: 86.9 E(32554): 1.1e-17
Smith-Waterman score: 502; 38.5% identity (68.7% similar) in 195 aa overlap (1-193:40-224)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELV
.:. .:.: . .:.::.:.:.. : :.:
CCDS44 YLDNLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMV
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB9 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
... :..:. . ::: .: . .:. .. ::. ....: :.. : :..
CCDS44 DKHIRRLDTDLARFEA--DLKEKQIESSDYDSSSSKGKKKGRTQKE--KKAARARSK---
70 80 90 100 110 120
100 110 120 130 140
pF1KB9 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAK--AEREASPADLPIDPNEPTYCLCNQ
..: :.. .. : : ..:: . .. . . .. :.:.::::::::::.:
CCDS44 ---GKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQ
130 140 150 160 170
150 160 170 180 190 200
pF1KB9 VSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAY
::::::::::: .: ::::::.::::. ::.:::.::.: : .:
CCDS44 VSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK
180 190 200 210 220
210
pF1KB9 NR
>>CCDS44813.1 ING4 gene_id:51147|Hs108|chr12 (249 aa)
initn: 511 init1: 368 opt: 502 Z-score: 430.6 bits: 86.9 E(32554): 1.1e-17
Smith-Waterman score: 502; 38.5% identity (68.7% similar) in 195 aa overlap (1-193:64-248)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELV
.:. .:.: . .:.::.:.:.. : :.:
CCDS44 RTEDLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB9 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
... :..:. . ::: .: . .:. .. ::. ....: :.. : :..
CCDS44 DKHIRRLDTDLARFEA--DLKEKQIESSDYDSSSSKGKKKGRTQKE--KKAARARSK---
100 110 120 130 140
100 110 120 130 140
pF1KB9 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAK--AEREASPADLPIDPNEPTYCLCNQ
..: :.. .. : : ..:: . .. . . .. :.:.::::::::::.:
CCDS44 ---GKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQ
150 160 170 180 190 200
150 160 170 180 190 200
pF1KB9 VSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAY
::::::::::: .: ::::::.::::. ::.:::.::.: : .:
CCDS44 VSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK
210 220 230 240
210
pF1KB9 NR
>>CCDS44814.1 ING4 gene_id:51147|Hs108|chr12 (246 aa)
initn: 507 init1: 368 opt: 428 Z-score: 370.0 bits: 75.7 E(32554): 2.7e-14
Smith-Waterman score: 495; 38.4% identity (66.2% similar) in 198 aa overlap (1-193:64-245)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELV
.:. .:.: . .:.::.:.:.. : :.:
CCDS44 RTEDLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB9 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
... :..:. . :::. . : ... :. .::..: :....
CCDS44 DKHIRRLDTDLARFEADL---------------KEKQIESSDYDSSSSKEGRTQKEKKAA
100 110 120 130
100 110 120 130 140
pF1KB9 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREAS--PAD---LPIDPNEPTYCL
. :.... :. : : . :: : . . . . .: :.: .:.:::::::::
CCDS44 RARSKGKNSDEEAPKTAQ-KKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCL
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB9 CNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKE
:.:::::::::::: .: ::::::.::::. ::.:::.::.: : .:
CCDS44 CHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK
200 210 220 230 240
210
pF1KB9 RAYNR
>>CCDS44815.1 ING4 gene_id:51147|Hs108|chr12 (245 aa)
initn: 500 init1: 368 opt: 422 Z-score: 365.1 bits: 74.8 E(32554): 5.1e-14
Smith-Waterman score: 490; 36.9% identity (66.7% similar) in 195 aa overlap (1-193:64-244)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELV
.:. .:.: . .:.::.:.:.. : :.:
CCDS44 RTEDLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB9 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
... :..:. . ::: .: . .:. .. :: :......
CCDS44 DKHIRRLDTDLARFEA--DLKEKQIESSDYDSSSSKG------------RTQKEKKAARA
100 110 120 130
100 110 120 130 140
pF1KB9 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAK--AEREASPADLPIDPNEPTYCLCNQ
.. ..: :.. .. : : ..:: . .. . . .. :.:.::::::::::.:
CCDS44 RSKGKNSDEEAPKTAQKKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQ
140 150 160 170 180 190
150 160 170 180 190 200
pF1KB9 VSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKERAY
::::::::::: .: ::::::.::::. ::.:::.::.: : .:
CCDS44 VSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK
200 210 220 230 240
210
pF1KB9 NR
>>CCDS8555.1 ING4 gene_id:51147|Hs108|chr12 (248 aa)
initn: 511 init1: 368 opt: 422 Z-score: 365.1 bits: 74.8 E(32554): 5.2e-14
Smith-Waterman score: 500; 39.4% identity (66.2% similar) in 198 aa overlap (1-193:64-247)
10 20 30
pF1KB9 MLHCVQRALIRSQELGDEKIQIVSQMVELV
.:. .:.: . .:.::.:.:.. : :.:
CCDS85 RTEDLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMV
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB9 ENRTRQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENR
... :..:. . ::: .: . .:. .. :: :.:: :....
CCDS85 DKHIRRLDTDLARFEA--DLKEKQIESSDYDSSSSKG-----------KKSRTQKEKKAA
100 110 120 130 140
100 110 120 130 140
pF1KB9 ENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREAS--PAD---LPIDPNEPTYCL
. :.... :. : : . :: : . . . . .: :.: .:.:::::::::
CCDS85 RARSKGKNSDEEAPKTAQ-KKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCL
150 160 170 180 190
150 160 170 180 190 200
pF1KB9 CNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKE
:.:::::::::::: .: ::::::.::::. ::.:::.::.: : .:
CCDS85 CHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKKK
200 210 220 230 240
210
pF1KB9 RAYNR
210 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:03:46 2016 done: Fri Nov 4 20:03:46 2016
Total Scan time: 2.300 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]