Result of FASTA (ccds) for
pF1KB9742
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9742, 521 aa
1>>>pF1KB9742 521 - 521 aa - 521 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.6926+/-0.00126; mu= -5.6359+/- 0.074
mean_var=395.3213+/-84.505, 0's: 0 Z-trim(112.2): 762 B-trim: 700 in 1/50
Lambda= 0.064506
statistics sampled from 12136 (13001) to 12136 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.399), width: 16
Scan time: 3.760
The best scores are: opt bits E(32554)
CCDS32687.1 VEZF1 gene_id:7716|Hs108|chr17 ( 521) 3499 340.1 3.6e-93
CCDS82169.1 VEZF1 gene_id:7716|Hs108|chr17 ( 512) 3421 332.9 5.4e-91
CCDS61902.1 MAZ gene_id:4150|Hs108|chr16 ( 454) 891 97.4 3.8e-20
CCDS42143.1 MAZ gene_id:4150|Hs108|chr16 ( 477) 891 97.4 3.9e-20
CCDS42144.1 MAZ gene_id:4150|Hs108|chr16 ( 493) 880 96.4 8.1e-20
CCDS46691.1 PATZ1 gene_id:23598|Hs108|chr22 ( 537) 818 90.6 4.7e-18
CCDS13894.1 PATZ1 gene_id:23598|Hs108|chr22 ( 687) 809 89.9 1e-17
CCDS13895.1 PATZ1 gene_id:23598|Hs108|chr22 ( 641) 797 88.8 2.1e-17
CCDS13896.1 PATZ1 gene_id:23598|Hs108|chr22 ( 537) 565 67.1 5.8e-11
>>CCDS32687.1 VEZF1 gene_id:7716|Hs108|chr17 (521 aa)
initn: 3499 init1: 3499 opt: 3499 Z-score: 1786.2 bits: 340.1 E(32554): 3.6e-93
Smith-Waterman score: 3499; 100.0% identity (100.0% similar) in 521 aa overlap (1-521:1-521)
10 20 30 40 50 60
pF1KB9 MEANWTAFLFQAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MEANWTAFLFQAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 DAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGIKLVSRPKKTPTTVVPLISTIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 DAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGIKLVSRPKKTPTTVVPLISTIA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 GDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 KAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 KAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 FSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSCNICGKLLSAAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSCNICGKLLSAAY
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 ITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQHVTSWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 ITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQHVTSWP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 GKQVETLRLWEEAVKARKKEAANLCQTSTAATTPVTLTTPFSITSSVSSGTMSNPVTVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GKQVETLRLWEEAVKARKKEAANLCQTSTAATTPVTLTTPFSITSSVSSGTMSNPVTVAA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 AMSMRSPVNVSSAVNITSPMNIGHPVTITSPLSMTSPLTLTTPVNLPTPVTAPVNIAHPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 AMSMRSPVNVSSAVNITSPMNIGHPVTITSPLSMTSPLTLTTPVNLPTPVTAPVNIAHPV
430 440 450 460 470 480
490 500 510 520
pF1KB9 TITSPMNLPTPMTLAAPLNIAMRPVESMPFLPQALPTSPPW
:::::::::::::::::::::::::::::::::::::::::
CCDS32 TITSPMNLPTPMTLAAPLNIAMRPVESMPFLPQALPTSPPW
490 500 510 520
>>CCDS82169.1 VEZF1 gene_id:7716|Hs108|chr17 (512 aa)
initn: 3421 init1: 3421 opt: 3421 Z-score: 1747.0 bits: 332.9 E(32554): 5.4e-91
Smith-Waterman score: 3421; 100.0% identity (100.0% similar) in 510 aa overlap (12-521:3-512)
10 20 30 40 50 60
pF1KB9 MEANWTAFLFQAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLK
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MAAHEASHHQQQAAQNSLLPLLSSAVEPPDQKPLLPIPITQKPQGAPETLK
10 20 30 40 50
70 80 90 100 110 120
pF1KB9 DAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGIKLVSRPKKTPTTVVPLISTIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESCHTGIKLVSRPKKTPTTVVPLISTIA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KB9 GDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKPVKKNHACEMCG
120 130 140 150 160 170
190 200 210 220 230 240
pF1KB9 KAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 KAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCSVCGKG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KB9 FSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSCNICGKLLSAAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 FSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSCNICGKLLSAAY
240 250 260 270 280 290
310 320 330 340 350 360
pF1KB9 ITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQHVTSWP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQHVTSWP
300 310 320 330 340 350
370 380 390 400 410 420
pF1KB9 GKQVETLRLWEEAVKARKKEAANLCQTSTAATTPVTLTTPFSITSSVSSGTMSNPVTVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 GKQVETLRLWEEAVKARKKEAANLCQTSTAATTPVTLTTPFSITSSVSSGTMSNPVTVAA
360 370 380 390 400 410
430 440 450 460 470 480
pF1KB9 AMSMRSPVNVSSAVNITSPMNIGHPVTITSPLSMTSPLTLTTPVNLPTPVTAPVNIAHPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 AMSMRSPVNVSSAVNITSPMNIGHPVTITSPLSMTSPLTLTTPVNLPTPVTAPVNIAHPV
420 430 440 450 460 470
490 500 510 520
pF1KB9 TITSPMNLPTPMTLAAPLNIAMRPVESMPFLPQALPTSPPW
:::::::::::::::::::::::::::::::::::::::::
CCDS82 TITSPMNLPTPMTLAAPLNIAMRPVESMPFLPQALPTSPPW
480 490 500 510
>>CCDS61902.1 MAZ gene_id:4150|Hs108|chr16 (454 aa)
initn: 1170 init1: 835 opt: 891 Z-score: 475.2 bits: 97.4 E(32554): 3.8e-20
Smith-Waterman score: 1010; 54.3% identity (77.0% similar) in 265 aa overlap (66-327:159-409)
40 50 60 70 80 90
pF1KB9 EPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESC
:: : : ..:. :.: :...:.:::::.
CCDS61 SAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAI
130 140 150 160 170 180
100 110 120 130 140 150
pF1KB9 HTGIKLVSRPK---KTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSA
::: : :. : :: .::: : .. : ..: . ...: . .. :
CCDS61 HTGAKAGRVPSGAMKMPT-MVPL-SLLS--------VPQLSGAGGGGGEAGAGGGAAAVA
190 200 210 220 230
160 170 180 190 200 210
pF1KB9 STTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFK
. .. .: : :. ..::::::::::::::::::::::::::::::..::.:.::::
CCDS61 AGGVVTTTASGKR----IRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFK
240 250 260 270 280 290
220 230 240 250 260 270
pF1KB9 RKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFAT
:::::.::::::.:.. :::.:: :::.:::::::. ::..::::::::::. : :::::
CCDS61 RKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFAT
300 310 320 330 340 350
280 290 300 310 320 330
pF1KB9 KDRLRTHMVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEET
:::::.: :::: :: :..:::.::.:::..:.:.:.:. :. :..: ...:
CCDS61 KDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELCNKGTGEVCPMAAA
360 370 380 390 400 410
340 350 360 370 380 390
pF1KB9 SNQKQQQQQQQQQQQQQQQQQQHVTSWPGKQVETLRLWEEAVKARKKEAANLCQTSTAAT
CCDS61 AAAAAAAAAAAVAAPPTAVGSLSGAEGVPVSSQPLPSQPW
420 430 440 450
>>CCDS42143.1 MAZ gene_id:4150|Hs108|chr16 (477 aa)
initn: 1124 init1: 835 opt: 891 Z-score: 475.0 bits: 97.4 E(32554): 3.9e-20
Smith-Waterman score: 1010; 54.3% identity (77.0% similar) in 265 aa overlap (66-327:182-432)
40 50 60 70 80 90
pF1KB9 EPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESC
:: : : ..:. :.: :...:.:::::.
CCDS42 SAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAI
160 170 180 190 200 210
100 110 120 130 140 150
pF1KB9 HTGIKLVSRPK---KTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSA
::: : :. : :: .::: : .. : ..: . ...: . .. :
CCDS42 HTGAKAGRVPSGAMKMPT-MVPL-SLLS--------VPQLSGAGGGGGEAGAGGGAAAVA
220 230 240 250 260
160 170 180 190 200 210
pF1KB9 STTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFK
. .. .: : :. ..::::::::::::::::::::::::::::::..::.:.::::
CCDS42 AGGVVTTTASGKR----IRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFK
270 280 290 300 310
220 230 240 250 260 270
pF1KB9 RKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFAT
:::::.::::::.:.. :::.:: :::.:::::::. ::..::::::::::. : :::::
CCDS42 RKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFAT
320 330 340 350 360 370
280 290 300 310 320 330
pF1KB9 KDRLRTHMVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEET
:::::.: :::: :: :..:::.::.:::..:.:.:.:. :. :..: ...:
CCDS42 KDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELCNKGTGEVCPMAAA
380 390 400 410 420 430
340 350 360 370 380 390
pF1KB9 SNQKQQQQQQQQQQQQQQQQQQHVTSWPGKQVETLRLWEEAVKARKKEAANLCQTSTAAT
CCDS42 AAAAAAAAAAAVAAPPTAVGSLSGAEGVPVSSQPLPSQPW
440 450 460 470
>>CCDS42144.1 MAZ gene_id:4150|Hs108|chr16 (493 aa)
initn: 1124 init1: 835 opt: 880 Z-score: 469.2 bits: 96.4 E(32554): 8.1e-20
Smith-Waterman score: 999; 54.6% identity (77.1% similar) in 262 aa overlap (66-324:182-429)
40 50 60 70 80 90
pF1KB9 EPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESC
:: : : ..:. :.: :...:.:::::.
CCDS42 SAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAI
160 170 180 190 200 210
100 110 120 130 140 150
pF1KB9 HTGIKLVSRPK---KTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSA
::: : :. : :: .::: : .. : ..: . ...: . .. :
CCDS42 HTGAKAGRVPSGAMKMPT-MVPL-SLLS--------VPQLSGAGGGGGEAGAGGGAAAVA
220 230 240 250 260
160 170 180 190 200 210
pF1KB9 STTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFK
. .. .: : :. ..::::::::::::::::::::::::::::::..::.:.::::
CCDS42 AGGVVTTTASGKR----IRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFK
270 280 290 300 310
220 230 240 250 260 270
pF1KB9 RKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFAT
:::::.::::::.:.. :::.:: :::.:::::::. ::..::::::::::. : :::::
CCDS42 RKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFAT
320 330 340 350 360 370
280 290 300 310 320 330
pF1KB9 KDRLRTHMVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEET
:::::.: :::: :: :..:::.::.:::..:.:.:.:. :. :..:..
CCDS42 KDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELCNKGFTTAAYLRIH
380 390 400 410 420 430
340 350 360 370 380 390
pF1KB9 SNQKQQQQQQQQQQQQQQQQQQHVTSWPGKQVETLRLWEEAVKARKKEAANLCQTSTAAT
CCDS42 AVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAPPVPGDAPQPQPTC
440 450 460 470 480 490
>>CCDS46691.1 PATZ1 gene_id:23598|Hs108|chr22 (537 aa)
initn: 976 init1: 796 opt: 818 Z-score: 437.6 bits: 90.6 E(32554): 4.7e-18
Smith-Waterman score: 818; 52.5% identity (77.9% similar) in 204 aa overlap (148-349:327-530)
120 130 140 150 160 170
pF1KB9 TIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKP--VKKNHA
: . ...:.... : : ..:. :
CCDS46 CGKVFTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVA
300 310 320 330 340 350
180 190 200 210 220 230
pF1KB9 CEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCS
::.::: ::::::::::::::: :::. ::.:. ::::::::.::::::.:.. ::: :.
CCDS46 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ
360 370 380 390 400 410
240 250 260 270 280 290
pF1KB9 VCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSCNICGKL
:::::::::::. :.:.::..::: :::::.:.:::.::::.:.. :: :: :..:::
CCDS46 SCGKGFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKY
420 430 440 450 460 470
300 310 320 330 340 350
pF1KB9 LSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQH
: :::...::: :... : :. :..:.. : ... .:. ::.. .
CCDS46 LRAAYMADHLKKHSEGPSNFCSICNRGLQAPGAHPEWGSSVPLRQDLWQQRRPEMLTSGS
480 490 500 510 520 530
360 370 380 390 400 410
pF1KB9 VTSWPGKQVETLRLWEEAVKARKKEAANLCQTSTAATTPVTLTTPFSITSSVSSGTMSNP
CCDS46 D
>>CCDS13894.1 PATZ1 gene_id:23598|Hs108|chr22 (687 aa)
initn: 934 init1: 754 opt: 809 Z-score: 431.7 bits: 89.9 E(32554): 1e-17
Smith-Waterman score: 809; 58.1% identity (82.1% similar) in 179 aa overlap (148-324:327-505)
120 130 140 150 160 170
pF1KB9 TIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKP--VKKNHA
: . ...:.... : : ..:. :
CCDS13 CGKVFTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVA
300 310 320 330 340 350
180 190 200 210 220 230
pF1KB9 CEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCS
::.::: ::::::::::::::: :::. ::.:. ::::::::.::::::.:.. ::: :.
CCDS13 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ
360 370 380 390 400 410
240 250 260 270 280 290
pF1KB9 VCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSCNICGKL
:::::::::::. :.:.::..::: :::::.:.:::.::::.:.. :: :: :..:::
CCDS13 SCGKGFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKY
420 430 440 450 460 470
300 310 320 330 340 350
pF1KB9 LSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQH
: :::...::: :... : :. :..:.:
CCDS13 LRAAYMADHLKKHSEGPSNFCSICNRGFSSASYLKVHVKTHHGVPLPQVSRHQEPILNGG
480 490 500 510 520 530
>>CCDS13895.1 PATZ1 gene_id:23598|Hs108|chr22 (641 aa)
initn: 934 init1: 754 opt: 797 Z-score: 426.1 bits: 88.8 E(32554): 2.1e-17
Smith-Waterman score: 797; 55.9% identity (80.1% similar) in 186 aa overlap (148-331:327-511)
120 130 140 150 160 170
pF1KB9 TIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKP--VKKNHA
: . ...:.... : : ..:. :
CCDS13 CGKVFTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVA
300 310 320 330 340 350
180 190 200 210 220 230
pF1KB9 CEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCS
::.::: ::::::::::::::: :::. ::.:. ::::::::.::::::.:.. ::: :.
CCDS13 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ
360 370 380 390 400 410
240 250 260 270 280 290
pF1KB9 VCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSCNICGKL
:::::::::::. :.:.::..::: :::::.:.:::.::::.:.. :: :: :..:::
CCDS13 SCGKGFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKY
420 430 440 450 460 470
300 310 320 330 340 350
pF1KB9 LSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEETSNQKQQQQQQQQQQQQQQQQQQH
: :::...::: :... : :. :.. .: : ..
CCDS13 LRAAYMADHLKKHSEGPSNFCSICNREGQK-CSHQDPIESSDSYGDLSDASDLKTPEKQS
480 490 500 510 520 530
360 370 380 390 400 410
pF1KB9 VTSWPGKQVETLRLWEEAVKARKKEAANLCQTSTAATTPVTLTTPFSITSSVSSGTMSNP
CCDS13 ANGSFSCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGP
540 550 560 570 580 590
>>CCDS13896.1 PATZ1 gene_id:23598|Hs108|chr22 (537 aa)
initn: 548 init1: 548 opt: 565 Z-score: 310.4 bits: 67.1 E(32554): 5.8e-11
Smith-Waterman score: 565; 60.5% identity (81.5% similar) in 119 aa overlap (148-264:327-445)
120 130 140 150 160 170
pF1KB9 TIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSASTTAMPVTQSVKKPSKP--VKKNHA
: . ...:.... : : ..:. :
CCDS13 CGKVFTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVA
300 310 320 330 340 350
180 190 200 210 220 230
pF1KB9 CEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFKRKDRMTYHVRSHEGGITKPYTCS
::.::: ::::::::::::::: :::. ::.:. ::::::::.::::::.:.. ::: :.
CCDS13 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ
360 370 380 390 400 410
240 250 260 270 280 290
pF1KB9 VCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFATKDRLRTHMVRHEGKVSCNICGKL
:::::::::::. :.:.::..::: :::
CCDS13 SCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVGSSSGLPPLEPLPSDLPSWDFAQPALWR
420 430 440 450 460 470
521 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:38:42 2016 done: Fri Nov 4 18:38:42 2016
Total Scan time: 3.760 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]