Result of FASTA (ccds) for
pF1KB9697
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9697, 270 aa
1>>>pF1KB9697 270 - 270 aa - 270 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8722+/-0.000668; mu= 9.2017+/- 0.041
mean_var=114.3379+/-22.632, 0's: 0 Z-trim(114.7): 65 B-trim: 0 in 0/51
Lambda= 0.119944
statistics sampled from 15211 (15276) to 15211 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.469), width: 16
Scan time: 2.530
The best scores are: opt bits E(32554)
CCDS7933.2 SPI1 gene_id:6688|Hs108|chr11 ( 270) 1893 337.4 6.4e-93
CCDS44591.1 SPI1 gene_id:6688|Hs108|chr11 ( 271) 1881 335.3 2.7e-92
CCDS33080.1 SPIB gene_id:6689|Hs108|chr19 ( 262) 615 116.2 2.3e-26
CCDS58674.1 SPIB gene_id:6689|Hs108|chr19 ( 171) 548 104.5 5.1e-23
CCDS9082.1 SPIC gene_id:121599|Hs108|chr12 ( 248) 399 78.9 4e-15
>>CCDS7933.2 SPI1 gene_id:6688|Hs108|chr11 (270 aa)
initn: 1893 init1: 1893 opt: 1893 Z-score: 1781.6 bits: 337.4 E(32554): 6.4e-93
Smith-Waterman score: 1893; 99.6% identity (100.0% similar) in 270 aa overlap (1-270:1-270)
10 20 30 40 50 60
pF1KB9 MLQACKMEGFPLVPPPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 MLQACKMEGFPLVPPPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVHS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 EFESFAENNFTELQSVQPPQLQQLYRYMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCLQ
::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
CCDS79 EFESFAENNFTELQSVQPPQLQQLYRHMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 YPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSKKKIRLYQFLLDLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 YPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSKKKIRLYQFLLDLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 RSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS79 RSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGE
190 200 210 220 230 240
250 260 270
pF1KB9 VKKVKKKLTYQFSGEVLGRGGLAERRHPPH
::::::::::::::::::::::::::::::
CCDS79 VKKVKKKLTYQFSGEVLGRGGLAERRHPPH
250 260 270
>>CCDS44591.1 SPI1 gene_id:6688|Hs108|chr11 (271 aa)
initn: 1790 init1: 1790 opt: 1881 Z-score: 1770.4 bits: 335.3 E(32554): 2.7e-92
Smith-Waterman score: 1881; 99.3% identity (99.6% similar) in 271 aa overlap (1-270:1-271)
10 20 30 40 50
pF1KB9 MLQACKMEGFPLVPP-PSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVH
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MLQACKMEGFPLVPPQPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFHPHHVH
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 SEFESFAENNFTELQSVQPPQLQQLYRYMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCL
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
CCDS44 SEFESFAENNFTELQSVQPPQLQQLYRHMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 QYPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSKKKIRLYQFLLDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QYPSLSPAQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSKKKIRLYQFLLDL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 LRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTG
190 200 210 220 230 240
240 250 260 270
pF1KB9 EVKKVKKKLTYQFSGEVLGRGGLAERRHPPH
:::::::::::::::::::::::::::::::
CCDS44 EVKKVKKKLTYQFSGEVLGRGGLAERRHPPH
250 260 270
>>CCDS33080.1 SPIB gene_id:6689|Hs108|chr19 (262 aa)
initn: 530 init1: 480 opt: 615 Z-score: 586.7 bits: 116.2 E(32554): 2.3e-26
Smith-Waterman score: 615; 44.4% identity (63.1% similar) in 268 aa overlap (2-257:4-256)
10 20 30 40 50
pF1KB9 MLQACKMEG--FPLVPPPSEDLVPYDTDLYQRQTHEYYPYLSSDGESHSDHYWDFH--
:.: ...: : . : : : :: : . : :: :.:. : ::.
CCDS33 MLALEAAQLDGPHFSCLYP---DGVFYDLDSCK---HSSYP----DSEGAPDSLWDWTVA
10 20 30 40 50
60 70 80 90 100
pF1KB9 PHHVHSEFESF--AENNFTELQSVQ----PPQLQQLYRYMELEQMHVLDTPMVPPHPSLG
: . .:.: : :.. :..: :: . .:: : .: .:. .
CCDS33 PPVPATPYEAFDPAAAAFSHPQAAQLCYEPPTYSPAGN-LELAPSLEAPGPGLPAYPTEN
60 70 80 90 100
110 120 130 140 150 160
pF1KB9 HQVSYL-PRMCLQYPSLSPAQPSSDEEEGERQSPPLEVSDGEAD-GLEPGPGLLPGETGS
. : : :: ::. :.::. .:: :::::.:.: .: :: .:.:.
CCDS33 FASQTLVPPAYAPYP--SPVL--SEEEDLPLDSPALEVSDSESDEALVAGPEGKGSEAGT
110 120 130 140 150 160
170 180 190 200 210 220
pF1KB9 KKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQ
.::.::::::: :: :::.. .:::. :.::::::::: ::.::: ::::::.::::
CCDS33 RKKLRLYQFLLGLLTRGDMRECVWWVEPGAGVFQFSSKHKELLARRWGQQKGNRKRMTYQ
170 180 190 200 210 220
230 240 250 260 270
pF1KB9 KMARALRNYGKTGEVKKVKKKLTYQFSGEVLGRGGLAERRHPPH
:.:::::::.::::..:::.::::::.. .:
CCDS33 KLARALRNYAKTGEIRKVKRKLTYQFDSALLPAVRRA
230 240 250 260
>>CCDS58674.1 SPIB gene_id:6689|Hs108|chr19 (171 aa)
initn: 546 init1: 480 opt: 548 Z-score: 526.7 bits: 104.5 E(32554): 5.1e-23
Smith-Waterman score: 548; 59.3% identity (79.3% similar) in 145 aa overlap (117-257:22-165)
90 100 110 120 130 140
pF1KB9 YMELEQMHVLDTPMVPPHPSLGHQVSYLPRMCLQYPSLSPAQPS---SDEEEGERQSPPL
. : :. .: :: :.::. .:: :
CCDS58 MASSMTWTAASIPATLIQRGLLTLVPPAYAP-YPSPVLSEEEDLPLDSPAL
10 20 30 40 50
150 160 170 180 190 200
pF1KB9 EVSDGEAD-GLEPGPGLLPGETGSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFS
::::.:.: .: :: .:.:..::.::::::: :: :::.. .:::. :.::::
CCDS58 EVSDSESDEALVAGPEGKGSEAGTRKKLRLYQFLLGLLTRGDMRECVWWVEPGAGVFQFS
60 70 80 90 100 110
210 220 230 240 250 260
pF1KB9 SKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVKKKLTYQFSGEVLGRGGL
::::: ::.::: ::::::.:::::.:::::::.::::..:::.::::::.. .:
CCDS58 SKHKELLARRWGQQKGNRKRMTYQKLARALRNYAKTGEIRKVKRKLTYQFDSALLPAVRR
120 130 140 150 160 170
270
pF1KB9 AERRHPPH
CCDS58 A
>>CCDS9082.1 SPIC gene_id:121599|Hs108|chr12 (248 aa)
initn: 428 init1: 386 opt: 399 Z-score: 385.0 bits: 78.9 E(32554): 4e-15
Smith-Waterman score: 399; 57.7% identity (77.9% similar) in 104 aa overlap (157-259:97-200)
130 140 150 160 170 180
pF1KB9 AQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGS-KKKIRLYQFLLDLLRSGDM
: :: . :. .::.::...: . : . .:
CCDS90 RTVINSAADFYFEGNIHQSLQNITENQLVQPTLLQQKGGKGRKKLRLFEYLHESLYNPEM
70 80 90 100 110 120
190 200 210 220 230 240
pF1KB9 KDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVK
. : :::: :: ::: ::.:: ::. :: .::::: ::::::::::::::..::. :..
CCDS90 ASCIQWVDKTKGIFQFVSKNKEKLAELWGKRKGNRKTMTYQKMARALRNYGRSGEITKIR
130 140 150 160 170 180
250 260 270
pF1KB9 KKLTYQFSGEVLGRGGLAERRHPPH
.::::::: .: :
CCDS90 RKLTYQFSEAILQRLSPSYFLGKEIFYSQCVQPDQEYLSLNNWNANYNYTYANYHELNHH
190 200 210 220 230 240
270 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:24:22 2016 done: Fri Nov 4 18:24:23 2016
Total Scan time: 2.530 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]