Result of FASTA (omim) for
pF1KB9660
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9660, 312 aa
1>>>pF1KB9660 312 - 312 aa - 312 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8751+/-0.000644; mu= 9.4125+/- 0.039
mean_var=280.3652+/-57.296, 0's: 0 Z-trim(113.4): 2059 B-trim: 122 in 1/53
Lambda= 0.076597
statistics sampled from 20386 (22701) to 20386 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.597), E-opt: 0.2 (0.266), width: 16
Scan time: 6.310
The best scores are: opt bits E(85289)
XP_006711876 (OMIM: 194631) PREDICTED: zinc finger ( 310) 2060 241.5 1.6e-63
XP_011542574 (OMIM: 194631) PREDICTED: zinc finger ( 343) 2060 241.6 1.7e-63
NP_001284497 (OMIM: 194631) zinc finger protein 12 ( 351) 2060 241.6 1.7e-63
XP_005273314 (OMIM: 194631) PREDICTED: zinc finger ( 248) 1596 190.1 3.9e-48
NP_003422 (OMIM: 194631) zinc finger protein 124 i ( 289) 1596 190.2 4.2e-48
NP_001277014 (OMIM: 612248) zinc finger protein 62 ( 351) 1183 144.7 2.5e-34
NP_001277013 (OMIM: 612248) zinc finger protein 62 ( 351) 1183 144.7 2.5e-34
NP_001277012 (OMIM: 612248) zinc finger protein 62 ( 429) 1183 144.9 2.8e-34
XP_011526082 (OMIM: 612248) PREDICTED: zinc finger ( 429) 1183 144.9 2.8e-34
NP_660338 (OMIM: 612248) zinc finger protein 627 i ( 461) 1183 144.9 2.9e-34
XP_016882732 (OMIM: 604078) PREDICTED: zinc finger ( 474) 1154 141.7 2.7e-33
XP_011526571 (OMIM: 604078) PREDICTED: zinc finger ( 508) 1154 141.8 2.8e-33
NP_003428 (OMIM: 604078) zinc finger protein 136 [ ( 540) 1154 141.8 2.9e-33
NP_066358 (OMIM: 194556) zinc finger protein 14 [H ( 642) 1140 140.4 9.4e-33
XP_006722936 (OMIM: 194543) PREDICTED: zinc finger ( 569) 1132 139.4 1.6e-32
XP_011525924 (OMIM: 606697) PREDICTED: zinc finger ( 639) 1114 137.5 6.9e-32
NP_005806 (OMIM: 606697) zinc finger protein 443 [ ( 671) 1114 137.5 7.1e-32
XP_016881629 (OMIM: 606697) PREDICTED: zinc finger ( 673) 1114 137.5 7.1e-32
XP_016881628 (OMIM: 606697) PREDICTED: zinc finger ( 685) 1114 137.6 7.1e-32
XP_011525925 (OMIM: 606697) PREDICTED: zinc finger ( 718) 1114 137.6 7.3e-32
NP_001190179 (OMIM: 194557) zinc finger protein 20 ( 529) 1108 136.7 9.9e-32
NP_066966 (OMIM: 194557) zinc finger protein 20 is ( 532) 1108 136.7 9.9e-32
XP_016882571 (OMIM: 194551) PREDICTED: zinc finger ( 365) 1101 135.7 1.4e-31
XP_016882570 (OMIM: 194551) PREDICTED: zinc finger ( 365) 1101 135.7 1.4e-31
NP_067040 (OMIM: 194551) zinc finger protein 77 [H ( 545) 1101 136.0 1.7e-31
NP_001276331 (OMIM: 604077) zinc finger protein 13 ( 616) 1093 135.2 3.4e-31
XP_016882731 (OMIM: 604077) PREDICTED: zinc finger ( 621) 1093 135.2 3.4e-31
XP_016882730 (OMIM: 604077) PREDICTED: zinc finger ( 628) 1093 135.2 3.4e-31
XP_016882729 (OMIM: 604077) PREDICTED: zinc finger ( 658) 1093 135.2 3.5e-31
NP_001276330 (OMIM: 604077) zinc finger protein 13 ( 658) 1093 135.2 3.5e-31
XP_005259268 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1093 135.2 3.5e-31
XP_006723426 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1093 135.2 3.5e-31
NP_003427 (OMIM: 604077) zinc finger protein 135 i ( 670) 1093 135.2 3.5e-31
XP_006723425 (OMIM: 604077) PREDICTED: zinc finger ( 670) 1093 135.2 3.5e-31
NP_009065 (OMIM: 604077) zinc finger protein 135 i ( 682) 1093 135.2 3.6e-31
NP_940937 (OMIM: 609571) zinc finger protein 699 [ ( 642) 1081 133.9 8.6e-31
NP_112495 (OMIM: 603975) zinc finger protein 93 [H ( 620) 1068 132.4 2.3e-30
NP_001304045 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
NP_001304042 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
XP_016882427 (OMIM: 606043) PREDICTED: zinc finger ( 463) 1058 131.1 4.2e-30
NP_001240728 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
NP_061025 (OMIM: 606043) zinc finger protein 331 [ ( 463) 1058 131.1 4.2e-30
NP_001304046 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
NP_001073376 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
XP_016882429 (OMIM: 606043) PREDICTED: zinc finger ( 463) 1058 131.1 4.2e-30
NP_001304044 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
NP_001304048 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
NP_001304049 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
XP_016882428 (OMIM: 606043) PREDICTED: zinc finger ( 463) 1058 131.1 4.2e-30
NP_001240729 (OMIM: 606043) zinc finger protein 33 ( 463) 1058 131.1 4.2e-30
>>XP_006711876 (OMIM: 194631) PREDICTED: zinc finger pro (310 aa)
initn: 2060 init1: 2060 opt: 2060 Z-score: 1261.4 bits: 241.5 E(85289): 1.6e-63
Smith-Waterman score: 2060; 100.0% identity (100.0% similar) in 279 aa overlap (34-312:32-310)
10 20 30 40 50 60
pF1KB9 FNLNKKIPARVKPHECIVCEKFFIRHSSLHRHIISHSGNNPYGCEECGKKPCTCKQCQKT
::::::::::::::::::::::::::::::
XP_006 QETFRNLASIGNKGEDQSIEDQYKNSSRNLRHIISHSGNNPYGCEECGKKPCTCKQCQKT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 SLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGFS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 RSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 YHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 THIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 THIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTG
250 260 270 280 290 300
310
pF1KB9 EKPYKCKKM
:::::::::
XP_006 EKPYKCKKM
310
>>XP_011542574 (OMIM: 194631) PREDICTED: zinc finger pro (343 aa)
initn: 2060 init1: 2060 opt: 2060 Z-score: 1261.0 bits: 241.6 E(85289): 1.7e-63
Smith-Waterman score: 2060; 100.0% identity (100.0% similar) in 279 aa overlap (34-312:65-343)
10 20 30 40 50 60
pF1KB9 FNLNKKIPARVKPHECIVCEKFFIRHSSLHRHIISHSGNNPYGCEECGKKPCTCKQCQKT
::::::::::::::::::::::::::::::
XP_011 QETFRNLASIGNKGEDQSIEDQYKNSSRNLRHIISHSGNNPYGCEECGKKPCTCKQCQKT
40 50 60 70 80 90
70 80 90 100 110 120
pF1KB9 SLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGFS
100 110 120 130 140 150
130 140 150 160 170 180
pF1KB9 RSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLH
160 170 180 190 200 210
190 200 210 220 230 240
pF1KB9 YHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEK
220 230 240 250 260 270
250 260 270 280 290 300
pF1KB9 THIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTG
280 290 300 310 320 330
310
pF1KB9 EKPYKCKKM
:::::::::
XP_011 EKPYKCKKM
340
>>NP_001284497 (OMIM: 194631) zinc finger protein 124 is (351 aa)
initn: 2060 init1: 2060 opt: 2060 Z-score: 1260.9 bits: 241.6 E(85289): 1.7e-63
Smith-Waterman score: 2060; 100.0% identity (100.0% similar) in 279 aa overlap (34-312:73-351)
10 20 30 40 50 60
pF1KB9 FNLNKKIPARVKPHECIVCEKFFIRHSSLHRHIISHSGNNPYGCEECGKKPCTCKQCQKT
::::::::::::::::::::::::::::::
NP_001 QETFRNLASIGNKGEDQSIEDQYKNSSRNLRHIISHSGNNPYGCEECGKKPCTCKQCQKT
50 60 70 80 90 100
70 80 90 100 110 120
pF1KB9 SLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGFS
110 120 130 140 150 160
130 140 150 160 170 180
pF1KB9 RSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLH
170 180 190 200 210 220
190 200 210 220 230 240
pF1KB9 YHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEK
230 240 250 260 270 280
250 260 270 280 290 300
pF1KB9 THIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTG
290 300 310 320 330 340
310
pF1KB9 EKPYKCKKM
:::::::::
NP_001 EKPYKCKKM
350
>>XP_005273314 (OMIM: 194631) PREDICTED: zinc finger pro (248 aa)
initn: 1924 init1: 1596 opt: 1596 Z-score: 985.2 bits: 190.1 E(85289): 3.9e-48
Smith-Waterman score: 1596; 100.0% identity (100.0% similar) in 217 aa overlap (96-312:32-248)
70 80 90 100 110 120
pF1KB9 SVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGFSRS
::::::::::::::::::::::::::::::
XP_005 QETFRNLASIGNKGEDQSIEDQYKNSSRNLSSFQIHQRNHTGEKPYECMECGKALGFSRS
10 20 30 40 50 60
130 140 150 160 170 180
pF1KB9 LNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLHYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLHYH
70 80 90 100 110 120
190 200 210 220 230 240
pF1KB9 ERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEKTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEKTH
130 140 150 160 170 180
250 260 270 280 290 300
pF1KB9 IAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTGEK
190 200 210 220 230 240
310
pF1KB9 PYKCKKM
:::::::
XP_005 PYKCKKM
>>NP_003422 (OMIM: 194631) zinc finger protein 124 isofo (289 aa)
initn: 2144 init1: 1596 opt: 1596 Z-score: 984.6 bits: 190.2 E(85289): 4.2e-48
Smith-Waterman score: 1596; 100.0% identity (100.0% similar) in 217 aa overlap (96-312:73-289)
70 80 90 100 110 120
pF1KB9 SVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGFSRS
::::::::::::::::::::::::::::::
NP_003 QETFRNLASIGNKGEDQSIEDQYKNSSRNLSSFQIHQRNHTGEKPYECMECGKALGFSRS
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 LNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLHYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCLHYH
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB9 ERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEKTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 ERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHEKTH
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB9 IAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTGEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 IAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTGEK
230 240 250 260 270 280
310
pF1KB9 PYKCKKM
:::::::
NP_003 PYKCKKM
>>NP_001277014 (OMIM: 612248) zinc finger protein 627 is (351 aa)
initn: 3870 init1: 1175 opt: 1183 Z-score: 737.2 bits: 144.7 E(85289): 2.5e-34
Smith-Waterman score: 1192; 53.9% identity (73.9% similar) in 310 aa overlap (30-311:4-313)
10 20 30 40 50
pF1KB9 MPNFNLNKKIPARVKPHECIVCEKFFIRHSSLHRHIISHSGNNP-----YGCE-----EC
:::.::: .:.: .: :: . .:
NP_001 MGPSSLNRHIRDHTGREPNEYQEYGKKSYTRNQC
10 20 30
60 70 80 90
pF1KB9 GK------------------KPCTCKQCQKTSLSVTRVHRDTVMHTGNGHYGCTICEKVF
:. :: ::.: .: .:.. ..: . : :. : : .: :.:
NP_001 GRALSYHRSFPVRERTHPGGKPYDCKECGETFISLVSIRRHMLTHRGGVPYKCKVCGKAF
40 50 60 70 80 90
100 110 120 130 140 150
pF1KB9 NIPSSFQIHQRNHTGEKPYECMECGKALGFSRSLNRHKRIHTGEKRYECKQCGKAFSRSS
. :: :.::.:.::::::::: .::::.. : . :.: :::.: ::::::::::: :.
NP_001 DYPSLFRIHERSHTGEKPYECKQCGKAFSCSSYIRIHERTHTGDKPYECKQCGKAFSCSK
100 110 120 130 140 150
160 170 180 190 200 210
pF1KB9 HLRDHERTHTGEKPYECKHCGKAFRYSNCLHYHERTHTGEKPYVCMECGKAFSCLSSLQG
..: ::::::::::::::.:::::: .. .. ::::::::: . : :::::..::.:..
NP_001 YIRIHERTHTGEKPYECKQCGKAFRCASSVRSHERTHTGEKLFECKECGKALTCLASVRR
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB9 HIKAHAGEEPYPCKQCGKAFRYASSLQKHEKTHIAQKPYVCNNCGKGFRCSSSLRDHERT
:. :.:. :: :: ::::: . ::.. ::.:: ..::: :..:::.: ::::.: :::
NP_001 HMIKHTGNGPYKCKVCGKAFDFPSSFRIHERTHTGEKPYDCKQCGKAFSCSSSFRKHERI
220 230 240 250 260 270
280 290 300 310
pF1KB9 HTGEKPYECQKCGKAFSRASTLWKHKKTHTGEKPYKCKKM
:::::::.: ::::::::.: . :..::::::::.::.
NP_001 HTGEKPYKCTKCGKAFSRSSYFRIHERTHTGEKPYECKQCGKAFSRSTYFRVHEKIHTGE
280 290 300 310 320 330
NP_001 KPYENPNPNASVVPVLS
340 350
>>NP_001277013 (OMIM: 612248) zinc finger protein 627 is (351 aa)
initn: 3870 init1: 1175 opt: 1183 Z-score: 737.2 bits: 144.7 E(85289): 2.5e-34
Smith-Waterman score: 1192; 53.9% identity (73.9% similar) in 310 aa overlap (30-311:4-313)
10 20 30 40 50
pF1KB9 MPNFNLNKKIPARVKPHECIVCEKFFIRHSSLHRHIISHSGNNP-----YGCE-----EC
:::.::: .:.: .: :: . .:
NP_001 MGPSSLNRHIRDHTGREPNEYQEYGKKSYTRNQC
10 20 30
60 70 80 90
pF1KB9 GK------------------KPCTCKQCQKTSLSVTRVHRDTVMHTGNGHYGCTICEKVF
:. :: ::.: .: .:.. ..: . : :. : : .: :.:
NP_001 GRALSYHRSFPVRERTHPGGKPYDCKECGETFISLVSIRRHMLTHRGGVPYKCKVCGKAF
40 50 60 70 80 90
100 110 120 130 140 150
pF1KB9 NIPSSFQIHQRNHTGEKPYECMECGKALGFSRSLNRHKRIHTGEKRYECKQCGKAFSRSS
. :: :.::.:.::::::::: .::::.. : . :.: :::.: ::::::::::: :.
NP_001 DYPSLFRIHERSHTGEKPYECKQCGKAFSCSSYIRIHERTHTGDKPYECKQCGKAFSCSK
100 110 120 130 140 150
160 170 180 190 200 210
pF1KB9 HLRDHERTHTGEKPYECKHCGKAFRYSNCLHYHERTHTGEKPYVCMECGKAFSCLSSLQG
..: ::::::::::::::.:::::: .. .. ::::::::: . : :::::..::.:..
NP_001 YIRIHERTHTGEKPYECKQCGKAFRCASSVRSHERTHTGEKLFECKECGKALTCLASVRR
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB9 HIKAHAGEEPYPCKQCGKAFRYASSLQKHEKTHIAQKPYVCNNCGKGFRCSSSLRDHERT
:. :.:. :: :: ::::: . ::.. ::.:: ..::: :..:::.: ::::.: :::
NP_001 HMIKHTGNGPYKCKVCGKAFDFPSSFRIHERTHTGEKPYDCKQCGKAFSCSSSFRKHERI
220 230 240 250 260 270
280 290 300 310
pF1KB9 HTGEKPYECQKCGKAFSRASTLWKHKKTHTGEKPYKCKKM
:::::::.: ::::::::.: . :..::::::::.::.
NP_001 HTGEKPYKCTKCGKAFSRSSYFRIHERTHTGEKPYECKQCGKAFSRSTYFRVHEKIHTGE
280 290 300 310 320 330
NP_001 KPYENPNPNASVVPVLS
340 350
>>NP_001277012 (OMIM: 612248) zinc finger protein 627 is (429 aa)
initn: 3898 init1: 1175 opt: 1183 Z-score: 736.3 bits: 144.9 E(85289): 2.8e-34
Smith-Waterman score: 1248; 52.8% identity (72.6% similar) in 339 aa overlap (1-311:54-391)
10 20 30
pF1KB9 MPNFNLNKKIPARVKPHECIVCEKFFIRHS
.:. :::: :. ::: : :: . . :
NP_001 FKIPRRNISHIPERLCESKEGGQGEETFSQIPDGILNKKTPG-VKPCESSVCGEVGMGPS
30 40 50 60 70 80
40 50 60
pF1KB9 SLHRHIISHSGNNP-----YGCE-----ECGK------------------KPCTCKQCQK
::.::: .:.: .: :: . .::. :: ::.: .
NP_001 SLNRHIRDHTGREPNEYQEYGKKSYTRNQCGRALSYHRSFPVRERTHPGGKPYDCKECGE
90 100 110 120 130 140
70 80 90 100 110 120
pF1KB9 TSLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGF
: .:.. ..: . : :. : : .: :.:. :: :.::.:.::::::::: .::::..
NP_001 TFISLVSIRRHMLTHRGGVPYKCKVCGKAFDYPSLFRIHERSHTGEKPYECKQCGKAFSC
150 160 170 180 190 200
130 140 150 160 170 180
pF1KB9 SRSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCL
: . :.: :::.: ::::::::::: :...: ::::::::::::::.:::::: .. .
NP_001 SSYIRIHERTHTGDKPYECKQCGKAFSCSKYIRIHERTHTGEKPYECKQCGKAFRCASSV
210 220 230 240 250 260
190 200 210 220 230 240
pF1KB9 HYHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHE
. ::::::::: . : :::::..::.:.. :. :.:. :: :: ::::: . ::.. ::
NP_001 RSHERTHTGEKLFECKECGKALTCLASVRRHMIKHTGNGPYKCKVCGKAFDFPSSFRIHE
270 280 290 300 310 320
250 260 270 280 290 300
pF1KB9 KTHIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHT
.:: ..::: :..:::.: ::::.: ::: :::::::.: ::::::::.: . :..:::
NP_001 RTHTGEKPYDCKQCGKAFSCSSSFRKHERIHTGEKPYKCTKCGKAFSRSSYFRIHERTHT
330 340 350 360 370 380
310
pF1KB9 GEKPYKCKKM
:::::.::.
NP_001 GEKPYECKQCGKAFSRSTYFRVHEKIHTGEKPYENPNPNASVVPVLS
390 400 410 420
>>XP_011526082 (OMIM: 612248) PREDICTED: zinc finger pro (429 aa)
initn: 3898 init1: 1175 opt: 1183 Z-score: 736.3 bits: 144.9 E(85289): 2.8e-34
Smith-Waterman score: 1248; 52.8% identity (72.6% similar) in 339 aa overlap (1-311:54-391)
10 20 30
pF1KB9 MPNFNLNKKIPARVKPHECIVCEKFFIRHS
.:. :::: :. ::: : :: . . :
XP_011 FKIPRRNISHIPERLCESKEGGQGEETFSQIPDGILNKKTPG-VKPCESSVCGEVGMGPS
30 40 50 60 70 80
40 50 60
pF1KB9 SLHRHIISHSGNNP-----YGCE-----ECGK------------------KPCTCKQCQK
::.::: .:.: .: :: . .::. :: ::.: .
XP_011 SLNRHIRDHTGREPNEYQEYGKKSYTRNQCGRALSYHRSFPVRERTHPGGKPYDCKECGE
90 100 110 120 130 140
70 80 90 100 110 120
pF1KB9 TSLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGF
: .:.. ..: . : :. : : .: :.:. :: :.::.:.::::::::: .::::..
XP_011 TFISLVSIRRHMLTHRGGVPYKCKVCGKAFDYPSLFRIHERSHTGEKPYECKQCGKAFSC
150 160 170 180 190 200
130 140 150 160 170 180
pF1KB9 SRSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCL
: . :.: :::.: ::::::::::: :...: ::::::::::::::.:::::: .. .
XP_011 SSYIRIHERTHTGDKPYECKQCGKAFSCSKYIRIHERTHTGEKPYECKQCGKAFRCASSV
210 220 230 240 250 260
190 200 210 220 230 240
pF1KB9 HYHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHE
. ::::::::: . : :::::..::.:.. :. :.:. :: :: ::::: . ::.. ::
XP_011 RSHERTHTGEKLFECKECGKALTCLASVRRHMIKHTGNGPYKCKVCGKAFDFPSSFRIHE
270 280 290 300 310 320
250 260 270 280 290 300
pF1KB9 KTHIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHT
.:: ..::: :..:::.: ::::.: ::: :::::::.: ::::::::.: . :..:::
XP_011 RTHTGEKPYDCKQCGKAFSCSSSFRKHERIHTGEKPYKCTKCGKAFSRSSYFRIHERTHT
330 340 350 360 370 380
310
pF1KB9 GEKPYKCKKM
:::::.::.
XP_011 GEKPYECKQCGKAFSRSTYFRVHEKIHTGEKPYENPNPNASVVPVLS
390 400 410 420
>>NP_660338 (OMIM: 612248) zinc finger protein 627 isofo (461 aa)
initn: 3898 init1: 1175 opt: 1183 Z-score: 736.0 bits: 144.9 E(85289): 2.9e-34
Smith-Waterman score: 1248; 52.8% identity (72.6% similar) in 339 aa overlap (1-311:86-423)
10 20 30
pF1KB9 MPNFNLNKKIPARVKPHECIVCEKFFIRHS
.:. :::: :. ::: : :: . . :
NP_660 FKIPRRNISHIPERLCESKEGGQGEETFSQIPDGILNKKTPG-VKPCESSVCGEVGMGPS
60 70 80 90 100 110
40 50 60
pF1KB9 SLHRHIISHSGNNP-----YGCE-----ECGK------------------KPCTCKQCQK
::.::: .:.: .: :: . .::. :: ::.: .
NP_660 SLNRHIRDHTGREPNEYQEYGKKSYTRNQCGRALSYHRSFPVRERTHPGGKPYDCKECGE
120 130 140 150 160 170
70 80 90 100 110 120
pF1KB9 TSLSVTRVHRDTVMHTGNGHYGCTICEKVFNIPSSFQIHQRNHTGEKPYECMECGKALGF
: .:.. ..: . : :. : : .: :.:. :: :.::.:.::::::::: .::::..
NP_660 TFISLVSIRRHMLTHRGGVPYKCKVCGKAFDYPSLFRIHERSHTGEKPYECKQCGKAFSC
180 190 200 210 220 230
130 140 150 160 170 180
pF1KB9 SRSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTGEKPYECKHCGKAFRYSNCL
: . :.: :::.: ::::::::::: :...: ::::::::::::::.:::::: .. .
NP_660 SSYIRIHERTHTGDKPYECKQCGKAFSCSKYIRIHERTHTGEKPYECKQCGKAFRCASSV
240 250 260 270 280 290
190 200 210 220 230 240
pF1KB9 HYHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFRYASSLQKHE
. ::::::::: . : :::::..::.:.. :. :.:. :: :: ::::: . ::.. ::
NP_660 RSHERTHTGEKLFECKECGKALTCLASVRRHMIKHTGNGPYKCKVCGKAFDFPSSFRIHE
300 310 320 330 340 350
250 260 270 280 290 300
pF1KB9 KTHIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHT
.:: ..::: :..:::.: ::::.: ::: :::::::.: ::::::::.: . :..:::
NP_660 RTHTGEKPYDCKQCGKAFSCSSSFRKHERIHTGEKPYKCTKCGKAFSRSSYFRIHERTHT
360 370 380 390 400 410
310
pF1KB9 GEKPYKCKKM
:::::.::.
NP_660 GEKPYECKQCGKAFSRSTYFRVHEKIHTGEKPYENPNPNASVVPVLS
420 430 440 450 460
312 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 18:01:04 2016 done: Fri Nov 4 18:01:05 2016
Total Scan time: 6.310 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]